Query= MSMg01no525_n01.b1 MSMg01no525_n01.b1 CHROMAT_FILE:
MSMg01no525_n01.b1 PHD_FILE: MSMg01no525_n01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:33 2005
(696 letters)
>mm_chr15_22260683_22261777
Length = 1095
Score = 1315 bits (680), Expect = 0.0
Identities = 689/692 (99%), Gaps = 1/692 (0%)
Strand = Plus / Minus
Query: 5 gaattccataaaaggcttgggttagatcatcatgtgcatcacattcaacaatcagaatat 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 gaattccataaaatgcttgggttagatcatcatgtgcatcacattcaacaatcagaatat 836
Query: 65 atccactaatttacttatcctcacgttagtggtgccgacagctttcaaagtagagctgtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 atccactaatttacttatcctcacgttagtggtgccgacagctttcaaagtagagctgtt 776
Query: 125 attaaaatacccaatggctattatataagcatctctcggaaggacattgcatgggcttgt 184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 775 attaaaatacccaatggctattatataagcatctctcagaaggacattgcatgggcttgt 716
Query: 185 atttatatttctggctctggctctggctctccttctcccacctttacacttagtaacagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 atttatatttctggctctggctctggctctccttctcccacctttacacttagtaacagt 656
Query: 245 ctttttatagaggtgttaggggctgaaattaggctaatgccaagtcctgctggcctgctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ctttttatagaggtgttaggggctgaaattaggctaatgccaagtcctgctggcctgctc 596
Query: 305 ttagagtggctgcttagctattctcagctcctttatgggcttatataaaatattcactct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ttagagtggctgcttagctattctcagctcctttatgggcttatataaaatattcactct 536
Query: 365 cagagggccttcttcctacactcatttccaagtcaacctttcaaagcttaagtttgtatt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cagagggccttcttcctacactcatttccaagtcaacctttcaaagcttaagtttgtatt 476
Query: 425 aggattatttatatgagataacacagaatgcttattgagtttctcccaattttaacacaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aggattatttatatgagataacacagaatgcttattgagtttctcccaattttaacacaa 416
Query: 485 ttaattcaaaagatatacacatggtggtaagaaaaaaaaaagcagagattttaaggattt 544
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 415 ttaattcaaaagatatacacatggtggtaag-aaaaaaaaagcagagattttaaggattt 357
Query: 545 tcaggctttggtaccaattaaaattgggctctgaacaactgatctgtatttatcatgggg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tcaggctttggtaccaattaaaattgggctctgaacaactgatctgtatttatcatgggg 297
Query: 605 agcagaataggtttaaaatcgattcataaattgggcaatcattgggagaaaattgtggtg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agcagaataggtttaaaatcgattcataaattgggcaatcattgggagaaaattgtggtg 237
Query: 665 gcttgattcagctggacttattttaagactca 696
||||||||||||||||||||||||||||||||
Sbjct: 236 gcttgattcagctggacttattttaagactca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1095
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1085
Effective search space: 744310
Effective search space used: 744310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_n01.g1 MSMg01no525_n01.g1 CHROMAT_FILE:
MSMg01no525_n01.g1 PHD_FILE: MSMg01no525_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:00:33 2005
(657 letters)
>mm_chr15_22195260_22196316
Length = 1057
Score = 1245 bits (644), Expect = 0.0
Identities = 653/656 (99%)
Strand = Plus / Plus
Query: 1 gaaagatctcaacttttacctcaattgtgaaataaagaatgtaaacagaaagaaagggga 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 gaaagatctcaacttttacctcaattatgaaataaagaatgtaaacagaaagaaagggga 260
Query: 61 tgctatataatctcagttacgtaatatacttgcgtcattaaggttgcaacactatctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgctatataatctcagttacgtaatatacttgcgtcattaaggttgcaacactatctcaa 320
Query: 121 acagagaccccaaaatgggaccaagtattaaaacacatgtgcatatgagaagcattttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagagaccccaaaatgggaccaagtattaaaacacatgtgcatatgagaagcattttca 380
Query: 181 ttcaaatcaccaaaataagatttttaaacaaatattttcttgtctatggatccttgaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcaaatcaccaaaataagatttttaaacaaatattttcttgtctatggatccttgaatg 440
Query: 241 tatatagacaccaaacatcaatcgtttgtatacatgatgtagaaactaaaaagaaacaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatatagacaccaaacatcaatcgtttgtatacatgatgtagaaactaaaaagaaacaat 500
Query: 301 tatttgtaagttctcctcctattgtcaaatttttaatattttatcattttagggatagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatttgtaagttctcctcctattgtcaaatttttaatattttatcattttagggatagtt 560
Query: 361 tattttaatttctgtctatatttatttaaaacattcttagaatctttaatgatctacctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tattttaatttctgtctatatttatttaaaacattcttagaatctttaatgatctacctc 620
Query: 421 ttgatcaagagactgtactgaacacaaacattattgcttcagctactcttcttgatgatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgatcaagagactgtactgaacacaaacattattgcttcagctactcttcttgatgatt 680
Query: 481 ttaaatttatacccaaaccgtaagaaaatgtataggttagaggttcagttttagaatttt 540
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaaatttattcccaaaccataagaaaatgtataggttagaggttcagttttagaatttt 740
Query: 541 tttgagatttggcttgatgtatagtttgccttgaaagctattcaaaaatatgttgaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttgagatttggcttgatgtatagtttgccttgaaagctattcaaaaatatgttgaaaaa 800
Query: 601 tatgcttctcttcagttttcaaagaatgtctgtacaagtctgctagagccatttgg 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tatgcttctcttcagttttcaaagaatgtctgtacaagtctgctagagccatttgg 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
