TCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGAGATTACATGAAATTATTTATTTATTTGCTTCAAAACCTTCAT
CACTATCTTCACTTATACAGTGTTATTTTCTTTCATTGAAAAGCTTGCCT
CTGTTTTTCACCCTTCTCCACTTGGCACACTGGTGAACTCTTGGTGACAT
GGATCCTATACTGAAAAGAGTAGAGTTTTATTATTCCTGCTAAGCTCCTT
GATGGCTTCAGGATCTTGGCATCGAGGGAAAATCTCCTGTCATTTGTTAT
TGTTGTACCCCTTTATTCTTTTCTTCTCTGAGTGCTGTGTTTATTTTAAG
GACAAGGACAAATATTGGGATTTGGTAGAATATCCTGCCAAGAGAAAGCA
CATGCAAAACATAAAAATCCTGGAAACATTTGAAGACTCCTCCTCCTCAA
ACTGAAAGCCAGGGAAGGAAGCAGGATGGAAAAGAGCAGCACACAAGCAG
GGAAAGGAAGAAGGGAAAGGAAATGTCACCAGACCTGTTCTAGAATGGAC
TTGATGGTCACTTTCACTTTTTGCCATTTGTCTTCATCTTCATTTGGATA
CTTTGAGCCAGATATATAATCCCATCAATGACATTGAGAGTTCCAGGTCA
GCCAGAACTACAGAGCAAGTTAGAAGAGACCTCATCTTAAAAAAACATCA
TATAAACTCTTTTGAGTATGATGTCTTTCTTAGAAGCATAAAATAGTACA
GAAATTTACACAATCTTGGGTCCCACCCACAGCCTCG

TTATTATTTTTTTTTAGTTTTTTTTTTTTTATCTGTTTATTATTTTTTTT
TTTTTTTTACATATNTNTTTTATTTTTTTTCGAGAAAGGGTAGCCTGGGG
CGCCGTTTCAAAGAAGTTAGTGAACTATAGATTGTCCGCGAGATTCAAAT
CCTTGTGTATAAAATAAAAACTTTCCTGGCCCTTTGTCCCAAATTTTAAA
TTTTTGGAAAAAAATTTTTTTTTTTGTCTAATGTTGGGGTTAAATTTTTT
ACTTTTTAAAAAAATTAAAAAGTTTTAAAAAAAATTACACTTTTGTGTGT
TTTTTATTTTTGGGGGAAAATAAAAATTTTAAATTGAGGGTTTGGGGATT
TGGGGGAAAAAAACCCCTTTTTTAATTCTCCTGTTTTTTGGGGGGGAGTT
ATGTGTGGGTAATTTTTTTTTTTTTATGGTCGCTTGTTTTTTATAGGTTT
TTTTAAAAAAACGAGTTTTTAAAANTAAAAAATGGGCGGTAAAAAAAATT
ATTTTTGTAAAAAAAAAAAAAATGATTTCTTAGTTTTCGCTTTTTTTTTT
TCAACACCCTTTTTTTCTTTNATTCTTTTTTTTAATTTATAGATTTGTTT
G

Query= MSMg01no527_g15.b1 MSMg01no527_g15.b1 CHROMAT_FILE:
MSMg01no527_g15.b1 PHD_FILE: MSMg01no527_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:38 2005
         (629 letters)



>mm_chr15_42445329_42446357
          Length = 1029

 Score = 1178 bits (609), Expect = 0.0
 Identities = 621/625 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgagattacatgaaattatttatttatttgcttcaaaaccttcatcactatctt 64
           |||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gaattctgagaggagatgaaattatttatttatttgcttcaaaaccttcatcactatctt 770

                                                                       
Query: 65  cacttatacagtgttattttctttcattgaaaagcttgcctctgtttttcacccttctcc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 cacttatacagtgttattttctttcattgaaaagcttgcctctgtttttcacccttctcc 710

                                                                       
Query: 125 acttggcacactggtgaactcttggtgacatggatcctatactgaaaagagtagagtttt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 acttggcacactggtgaactcttggtgacatggatcctatactgaaaagagtagagtttt 650

                                                                       
Query: 185 attattcctgctaagctccttgatggcttcaggatcttggcatcgagggaaaatctcctg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 attattcctgctaagctccttgatggcttcaggatcttggcatcgagggaaaatctcctg 590

                                                                       
Query: 245 tcatttgttattgttgtacccctttattcttttcttctctgagtgctgtgtttattttaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tcatttgttattgttgtacccctttattcttttcttctctgagtgctgtgtttattttaa 530

                                                                       
Query: 305 ggacaaggacaaatattgggatttggtagaatatcctgccaagagaaagcacatgcaaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ggacaaggacaaatattgggatttggtagaatatcctgccaagagaaagcacatgcaaaa 470

                                                                       
Query: 365 cataaaaatcctggaaacatttgaagactcctcctcctcaaactgaaagccagggaagga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 cataaaaatcctggaaacatttgaagactcctcctcctcaaactgaaagccagggaagga 410

                                                                       
Query: 425 agcaggatggaaaagagcagcacacaagcagggaaaggaagaagggaaaggaaatgtcac 484
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 agcagggtggaaaagagcagcacacaagcagggaaaggaagaagggaaaggaaatgtcac 350

                                                                       
Query: 485 cagacctgttctagaatggacttgatggtcactttcactttttgccatttgtcttcatct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cagacctgttctagaatggacttgatggtcactttcactttttgccatttgtcttcatct 290

                                                                       
Query: 545 tcatttggatactttgagccagatatataatcccatcaatgacattgagagttccaggtc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tcatttggatactttgagccagatatataatcccatcaatgacattgagagttccaggtc 230

                                    
Query: 605 agccagaactacagagcaagttaga 629
           |||||||||||||||||||||||||
Sbjct: 229 agccagaactacagagcaagttaga 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space:   630761
Effective search space used:   630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)