Query= MSMg01no527_k17.b1 MSMg01no527_k17.b1 CHROMAT_FILE:
MSMg01no527_k17.b1 PHD_FILE: MSMg01no527_k17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:00 2005
(649 letters)
>mm_chr15_61489330_61490384
Length = 1055
Score = 1135 bits (587), Expect = 0.0
Identities = 633/651 (97%), Gaps = 6/651 (0%)
Strand = Plus / Minus
Query: 5 gaattcattggtacacactacagaagaactcacaggtaaccagtccttttggaaga---- 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 855 gaattcattggtacacactacagaagaactcacaggtaaccagtccttttggaaaatctt 796
Query: 61 -ttttttttttcctgaaagttctgtcttctctttctgattctagatgcaactatgttctt 119
|||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 795 tttttttttttcctgaaagttctatcttctctttctgattctagatgcaactacgttctt 736
Query: 120 ttcatttttgtttttccacatgttgctaaaatcactacaacaatcccaagttttcacatt 179
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 735 ttcatttttgtttttccacatgttgctaaaatcactccaacaatcccaagttttcacagt 676
Query: 180 tgcaatctaaacattctgaaggaaagagcaactgtattttctatccatacacccaaaccc 239
||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 675 tgcaacctaaacattctgaaggaaagagcaaccatattttctatccatacacccaaaccc 616
Query: 240 acagtcccatgtgcatacctgggtctcctggaggtgcactatctattaactggcttatgt 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 615 acagtcccatgtgcatacctgggtctcctggaggtgcaccatctattaactggcttatgt 556
Query: 300 ttggtttaaatgtctggtgtttgagaccagggatgtgaaattata-taagatgctgaatg 358
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 555 ttggtttaaatgtctggtgtttgaggccagggatgtgaaattatattaagatgctgaatg 496
Query: 359 aactcaggaagaaacctagccccagggttgggagtgaggtgaccgaaattcagtggggca 418
|| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 495 aaatcaggaagaaacctagccccagggttgggagtgaggtgactgaaattcagtggggca 436
Query: 419 actgtgcaacatactctagagaagcacccaccaaatcaactgctgttctctaattggctc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 actgtgcaacatactctagagaagcacccaccaaatcaactgctgttctctaattggctc 376
Query: 479 ttggcctgtctacaccatttccttaggctaagtttcctttaggctgtgtaaaaaggtgag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttggcctgtctacaccatttccttaggctaagtttcctttaggctgtgtaaaaaggtgag 316
Query: 539 attatctctgatgtttgcgggtggctggagctagttatcttagcatgcccctgagtttct 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 attatctctgatgtttgcgggtggctggagctagttatcttagcatgcccctgagtttct 256
Query: 599 cctttgagagcctcattacactgggtaccctacacaacaaatttgcctcac 649
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cctttgagagcctcattacactgggtaccctacacaacaaatttgcctcac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1055
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1045
Effective search space: 667755
Effective search space used: 667755
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no527_k17.g1 MSMg01no527_k17.g1 CHROMAT_FILE:
MSMg01no527_k17.g1 PHD_FILE: MSMg01no527_k17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:00 2005
(612 letters)
>mm_chr15_61333106_61334117
Length = 1012
Score = 1143 bits (591), Expect = 0.0
Identities = 612/629 (97%), Gaps = 17/629 (2%)
Strand = Plus / Plus
Query: 1 accttaggccaagctaaagagatggatggaatacctattgctggaattctctttc-tttt 59
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 184 accttaggccaagctaaagagatggatggaatacctattgctggaattctctttcttttt 243
Query: 60 ttttttc----------------ttttttttttgataaaatactcccattttgaggtccc 103
||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 244 ttttttctttttctttctttcttttttttttttgataaaatactcccattttgaggtccc 303
Query: 104 cagatcagtctccatgacctgtgaagccatgaggttggaatgagtcttccaaatttcagg 163
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cagatcagtctccatgacctgtgaagccatgaggttggaatgagtcttccaaatttcagg 363
Query: 164 aagatttgtctcttctctttcctttttttctctttcttttagatgccagacagaatccaa 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagatttgtctcttctctttcctttttttctctttcttttagatgccagacagaatccaa 423
Query: 224 gttttctttttctgatacattatacttctttactccatttctaaattccccaccaagacc 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gttttctttttctgatacattatacttctttactccatttctaaattccccaccaagacc 483
Query: 284 accagttggctgcttatctacaatgtgtctgagctccatggctgcttaaacaacatgatc 343
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 accagttggctgcttatctacaatgtgtctgagctccatggctgcttaaacaacatgatc 543
Query: 344 tttttctccttctcacctccattctcctccttcgagcagctggtgatacttgtaggttac 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 tttttctccttctcacctccattctcctccttcgagcagctggtgatacttgtaggttac 603
Query: 404 cttccctgaagtattttttcttataaaatataataaagttgtattttaattttcttttga 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cttccctgaagtattttttcttataaaatataataaagttgtattttaattttcttttga 663
Query: 464 gtctgtgcttaaattatcttctaatatactaagaacctgaggggaaaactgtaattttcc 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 gtctgtgcttaaattatcttctaatatactaagaacctgaggggaaaactgtaattttcc 723
Query: 524 ctgtttcaagaccacactgcacatgcaagggacaaccccgttctctgggtagattagttt 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ctgtttcaagaccacactgcacatgcaagggacaaccccgttctctgggtagattagttt 783
Query: 584 caaggcatggctctgggaatcattcccac 612
|||||||||||||||||||||||||||||
Sbjct: 784 caaggcatggctctgggaatcattcccac 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
