NNTTTCTTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCTGCTTCTGCTGTGCTAGGAAAGATGGCCTCTGAACTCCA
TGTATATAACTGCTCTGAACTGACGTCAATCTACCCTTTTCTATATCTCC
CACAGCGGTTAAGTAGCCTCTTTTTTCCTGTCTATTCTTGTGAGAGTTGG
GCATATTTTATTTCTGACCCATTCTGTCAAATCTTTCTGATTCCCCACTT
TGTCTTCCCCTCAACTAGATGTGATTGTTTGGTATACAATGTATGTATTA
ATGACATGTCTGTATTACAGACAGAGGGATGAAAGGTGTATACTAAGGGT
ATGTCTGTCTTCTACCAGTCATGTTGCTGAATTAAAATTTCTCTACAAAA
TAAAATCAAATTACAGGATTTGTAATTATAGTTACACTTTATATAGATTA
ATTTTTGGTGTAAATAATTTGATCAGAAGCAAGCACAATTTAAATTAAAA
CTTTTGTAAGTTTAATGTATAAAATTTTATCTTAATAGTCACTAAATATC
TGTTATGCTAACCTAAAAGTATAATTTTCTTCTTTTAACTGGATAGTTTT
GAATGTTATGGTTTTCACACATAGCTTTCTCTTAGATAACTATTAAAAGA
CAAAAGAATATTTTAAAAATCTATTAATAGNCATGTTCATTTGGGTTTTT
TTTTCTTTTAAGNTGCCAGAAACAATTTAGATTTAGTTCATAAATTTCTG
GNTCTAGATACATTTGGAGGAGCAACACCAAAACATTTAAA

CAATAAACAAAATTTAATATACCCCGCCTCTGCTCGCTTACTCCTTTCCG
CCCTCTCCCCACATCCCTATTAAATAAAGATTCGACCACCGGGGTGATAT
TGGTTACAAGGGTGGGCACCCGGGCCCACCACCTCCGCGTCACACCCCCA
CAACCCCACACAATAAAGAAAAAGAAATATAACCCGATAAGCGCTCCTGC
CGCGCCCTTTCCTCCCGCCCCCTAATTTTTATCCCCCCCATTTCCCCGTC
ATTGTTCTCGCGCGAAGATGTCCACAATTAAGACCCACCCCCCATAAAAC
AATAGTCTGATGGGTGTGTGTTTTTGTGTACGCGGTCGCGATGGGCTTTT
ATCTCCGCCGGGTGGATAAAACTTTTTTCCGCGGGCCCCAACATTGGGTA
AAGCGCCCATAAAATGGGAGGGGTTATAATGGGCATCTGCCGAACATGAT
CGTTACCAAGACAATACTATGAACATCCATATACCAAAAAAGTGATGAAA
CCACCATCCAGAAAATTCGGGGTTGCCCAGACGGTGTAATATGATATAAA
AAAAAAGAGGAGGGCGCAGGCCAAAGTCTTTGACACGAGAGGGACGATAC
TCCGTGTGGTTGTTCCCCCCCCCCCCGGAATAAAACCGCCCTGGCCAAGC
TATACAAAGCCGTTCAAATATTCGCCCTAAAAGAGAGCATGCAAGTTGTA
TGGCCGTTGCAATGTTAGGATACTGGACGCGACCAAACACCACACACTTC
TCGTAGGTGGGGGTGGCCGTTTGCACATATCCTACTAACGACTAACACGT
CACGCGAATCAGCAGCGAAAGAGAAACAAGGTGGTGTCGTCTGAAAGCAT
GTCTCACCAACCATTTATATTTTCCCCACCCNCGCACCTTTATTCGACCC
TTCTGCCTAAGATGAGACGAATCGCGGCGGCAATATACCGCACAACTTTA
TT

Query= MSMg01no527_o23.b1 MSMg01no527_o23.b1 CHROMAT_FILE:
MSMg01no527_o23.b1 PHD_FILE: MSMg01no527_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:03:23 2005
         (556 letters)



>mm_chr15_49288512_49289467
          Length = 956

 Score = 1036 bits (536), Expect = 0.0
 Identities = 548/552 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctgcttctgctgtgctaggaaagatggcctctgaactccatgtatataactgc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 205 gaattctctgcttctgctgtgctaggaaagatggcctctgaactccatgaatataactgc 264

                                                                       
Query: 65  tctgaactgacgtcaatctacccttttctatatctcccacagcggttaagtagcctcttt 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 265 tctgaactgacgtcaatctacccttttctatatctcccacagcggttaagtaacctcttt 324

                                                                       
Query: 125 tttcctgtctattcttgtgagagttgggcatattttatttctgacccattctgtcaaatc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttcctgtctattcttgtgagagttgggcatattttatttctgacccattctgtcaaatc 384

                                                                       
Query: 185 tttctgattccccactttgtcttcccctcaactagatgtgattgtttggtatacaatgta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttctgattccccactttgtcttcccctcaactagatgtgattgtttggtatacaatgta 444

                                                                       
Query: 245 tgtattaatgacatgtctgtattacagacagagggatgaaaggtgtatactaagggtatg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtattaatgacatgtctgtattacagacagagggatgaaaggtgtatactaagggtatg 504

                                                                       
Query: 305 tctgtcttctaccagtcatgttgctgaattaaaatttctctacaaaataaaatcaaatta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctgtcttctaccagtcatgttgctgaattaaaatttctctacaaaataaaatcaaatta 564

                                                                       
Query: 365 caggatttgtaattatagttacactttatatagattaatttttggtgtaaataatttgat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caggatttgtaattatagttacactttatatagattaatttttggtgtaaataatttgat 624

                                                                       
Query: 425 cagaagcaagcacaatttaaattaaaacttttgtaagtttaatgtataaaattttatctt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagaagcaagcacaatttaaattaaaacttttgtaagtttaatgtataaaattttatctt 684

                                                                       
Query: 485 aatagtcactaaatatctgttatgctaacctaaaagtataattttcttcttttaactgga 544
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 685 aatagtcactaaatatctgttatgctaatctaaaagtataattttcttcttttaactgga 744

                       
Query: 545 tagttttgaatg 556
           |||||| |||||
Sbjct: 745 tagtttcgaatg 756


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space:   516516
Effective search space used:   516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)