Query= MSMg01no528_m09.b1 MSMg01no528_m09.b1 CHROMAT_FILE:
MSMg01no528_m09.b1 PHD_FILE: MSMg01no528_m09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:28 2005
(689 letters)
>mm_chr15_90684038_90685128
Length = 1091
Score = 1286 bits (665), Expect = 0.0
Identities = 681/687 (99%), Gaps = 2/687 (0%)
Strand = Plus / Plus
Query: 5 gaattctttttcacccatgtctccattaagatgggaaaggcaaacagaagaaagggagaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttttcacccatgtctccattaagatgggaaaggcaaacagaagaaagggagaa 264
Query: 65 gatacttctagtacacagttccctgcttagtgtctactgaagccttccccggagatggct 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gatacttctagtacacagtaccctgcttagtgtctactgaagccttccccggagatggct 324
Query: 125 cagtagataacatttgtcatacaagccagacttagcaagacaacatctccaactttcatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cagtagataacatttgtcatacaagccagacttagcaagacaacatctccaactttcatc 384
Query: 185 acatttcaaaacacccacagttttctaagtctggatactgccagatgccacctacccgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acatttcaaaacacccacagttttctaagtctggatactgccagatgccacctacccgtg 444
Query: 245 tgtagaagaaaagagaaagagatagctgattttcaccccactgcgcatgtagtatgacta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtagaagaaaagagaaagagatagctgattttcaccccactgcgcatgtagtatgacta 504
Query: 305 tgtttacaaaataattggatctaatctagtaatgttggtgatgcatgcaacttatcacct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtttacaaaataattggatctaatctagtaatgttggtgatgcatgcaacttatcacct 564
Query: 365 gcctctttcacagatttgtttggggatacataatcaagacatcctttatacttatcatta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcctctttcacagatttgtttggggatacataatcaagacatcctttatacttatcatta 624
Query: 425 ccagaaaatcagtctattacacttaaatggatgaattacactatactttcacaaagcaat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccagaaaatcagtctattacacttaaatggatgaattacactatactttcacaaagcaat 684
Query: 485 tcctaaaattgacggcattttaaaaaaaaa--cacaaaaatgaacctaagggcttgggtc 542
||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 685 tcctaaaattgacagcatttaaaaaaaaaaaacacaaaaatgaacctaagggcttgggtc 744
Query: 543 cttttaggctgtctatcctgcagacacattcctcccagtggcatctgtttttgaaggtga 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttttaggctgtctatcctgcagacacattcctcccagtggcatctgtttttgaaggtga 804
Query: 603 ttagttactaactagcagagcctttatgttttcatgtaatgccctttctcagcttagcat 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttagttactaactagcagagcctttatgttttcatgtaatgccctttctcagcttagcat 864
Query: 663 ccggcttcccttcaccggtaccagttt 689
||||||||||||||| |||||||||||
Sbjct: 865 ccggcttcccttcactggtaccagttt 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1091
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1081
Effective search space: 733999
Effective search space used: 733999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_m09.g1 MSMg01no528_m09.g1 CHROMAT_FILE:
MSMg01no528_m09.g1 PHD_FILE: MSMg01no528_m09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:28 2005
(651 letters)
>mm_chr14_104300965_104302012
Length = 1048
Score = 1208 bits (625), Expect = 0.0
Identities = 644/651 (98%), Gaps = 3/651 (0%)
Strand = Plus / Plus
Query: 1 acggttttctttgaccaatgagagctagctactttgagagagaagactaggaaattgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acggttttctttgaccaatgagagctagctactttgagagagaagactaggaaattgtat 260
Query: 61 gctcacaacctgagagaagaaaaggtgcgcatgcgtgcgtgcatgcgtgcctgtgttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctcacaacctgagagaagaaaaggtgcgcatgcgtgcgtgcatgcgtgcctgtgttgta 320
Query: 121 gcgctgggaactgatcttccggccttgtacacatgaggtgacttttccagcactggctac 180
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcgctgggaactgatcctccggccttgtacacatgaggtgacttttccagcactggcta- 379
Query: 181 cccccccgcccccccccatgcccccttcccaggttctcttggccccaaatgcttctatcc 240
|||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 380 cccccccg--cccccccatgcccccttcccaggttctcttggccccaaacgcttctatcc 437
Query: 241 ttagtgagtccttgtgcagtatttgtttactttatgaggccgatctcatatctctcagac 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttagtgagtccttgtgcagtattcgtttactttatgaggccgatctcatatctctcagac 497
Query: 301 ttcaaacactccaaggagaatgatcttgaatgtctgatgatcttgcctgcacccacaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ttcaaacactccaaggagaatgatcttgaatgtctgatgatcttgcctgcacccacaagt 557
Query: 361 ggaagatacgtggcttatactacctgaccctgctagaaatgattatcctgaggaaggtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ggaagatacgtggcttatactacctgaccctgctagaaatgattatcctgaggaaggtga 617
Query: 421 gttcgtctgtggacacccgaagatctcacgacaggaacaaggaggcgatgggtttgaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gttcgtctgtggacacccgaagatctcacgacaggaacaaggaggcgatgggtttgaatg 677
Query: 481 agaggggtgtggaccacatgggaggatttggaaagaggaaagaagaaatgccattataat 540
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 678 agaggggtgtggaccacatgggaggatttggaaagaggaaagaagaaatgtcattataat 737
Query: 541 ctcaaaaataaaatttattattgaattacataattcaatactttgaggtttaaaattttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ctcaaaaataaaatttattattgaattacataattcaatactttgaggtttaaaattttc 797
Query: 601 tttcaaactgcttaaagagaaggtacagtagcttgtatggaaaactgtgac 651
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 tttcaaactgcttaaagagaaggtacagtagcttgtatggaaaactgtgac 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1048
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1038
Effective search space: 665358
Effective search space used: 665358
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
