Query= MSMg01no528_o14.b1 MSMg01no528_o14.b1 CHROMAT_FILE:
MSMg01no528_o14.b1 PHD_FILE: MSMg01no528_o14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:39 2005
(536 letters)
>mm_chr15_102543008_102543941
Length = 934
Score = 984 bits (509), Expect = 0.0
Identities = 529/543 (97%), Gaps = 13/543 (2%)
Strand = Plus / Plus
Query: 5 gaattcattctattttctttttttt-----------tttttgccttgcttaacactgaac 53
||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 194 gaattcattctattttcttttttttctttttttttttttttgccttgcttaacactgaac 253
Query: 54 tacaatctaagctctgaacttgctctaaatgattaaaaactgtttttaaaagtctgtcag 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tacaatctaagctctgaacttgctctaaatgattaaaaactgtttttaaaagtctgtcag 313
Query: 114 gacacagtgaacacactggagagcactaatccactgatgtgtgcttttaggttaattcag 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gacacagtgaacacactggagagcactaatccactgatgtgtgcttttaggttaattcag 373
Query: 174 aattaaatttcttttgtattttctagcaaattgaagagtaaaccgaagctgtaaagttga 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aattaaatttcttttgtattttctagcaaattgaagagtaaaccgaagctgtaaagttga 433
Query: 234 cagtttaaaaactgttatcactgactacttacttgtctgtgacacaaagtgtttaaaata 293
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cagtttaaaaact--tatcactgactacttacttgtctgtgacacaaagtgtttaaaata 491
Query: 294 tgaattccttcctttcttctttcctacctactgacatagtgtcagcctaggctggccttg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 tgaattccttcctttcttctttcctacctactgacatagtgtcagcctaggctggccttg 551
Query: 354 aagtaaaagatccttctgcctcagcttcctgagtgatagaacaaacgccaagcacaccat 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aagtaaaagatccttctgcctcagcttcctgagtgatagaacaaacgccaagcacaccat 611
Query: 414 catgtctggctcttatttcctccttttttatagcctttgcattagtgtgtatgtgtgtgc 473
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 catgtctggctcttatttcctccttttttatagcctttgcattagtgtgtatgtgtgtgt 671
Query: 474 atgcatgtgcatgtgcttgtgtgagtgtgtgtgtttgtgtgtgtgcgtgtatgcatgtgc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 atgcatgtgcatgtgcttgtgtgagtgtgtgtgtttgtgtgtgtgcgtgtatgcatgtgc 731
Query: 534 aga 536
|||
Sbjct: 732 aga 734
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 934
Length adjustment: 10
Effective length of query: 526
Effective length of database: 924
Effective search space: 486024
Effective search space used: 486024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no528_o14.g1 MSMg01no528_o14.g1 CHROMAT_FILE:
MSMg01no528_o14.g1 PHD_FILE: MSMg01no528_o14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:04:39 2005
(588 letters)
>mm_chr15_102685185_102686173
Length = 989
Score = 1048 bits (542), Expect = 0.0
Identities = 571/590 (96%), Gaps = 17/590 (2%)
Strand = Plus / Minus
Query: 1 tccagatgtgccagaaggacacagagtatgcctttcttcgtattctgcatgcttgcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 tccagatgtgccagaaggacacagagtatgcctttcttcgtattctgcatgcttgcttct 795
Query: 61 tcagctggccctgagatgggcttcagccagtcacacaaaatcgctctaaatgtgcaggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tcagctggccctgagatgggcttcagccagtcacacaaaatcgctctaaatgtgcaggca 735
Query: 121 aaggccacatgaccagcacagggtagagtatgctcccgcaactaaagcccagcattacgg 180
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 aaggccacatgaccagcacagggtagagtatgctcccgcaactaaa-------------- 689
Query: 181 gtaggacgaccttctcagccacgtctgtgcacccccatcgtggttggaatttcttctccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gtaggacgaccttctcagccacgtctgtgcacccccatcgtggttggaatttcttctccc 629
Query: 241 tgcaacaagcattcaggacttactttagaatccagctctgtaaattctcagctgagaaca 300
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 628 tgcaacaagcattcaggacttactttagaatccagctctgt-aattctcagctgagaaca 570
Query: 301 tttcttgaaatgagagaac--attttttttttaaataagagtctttctaccacaagtcag 358
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tttcttgaaatgagagaactttttttttttttaaataagagtctttctaccacaagtcag 510
Query: 359 ccccttagctcccactccagtgtgttgcttgctcatcaggctaagagtttccaaatgacc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 ccccttagctcccactccagtgtgttgcttgctcatcaggctaagagtttccaaatgacc 450
Query: 419 agagctaagccattctttaaaaattaaacatattgtacatctatgggtacctatgttatg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agagctaagccattctttaaaaattaaacatattgtacatctatgggtacctatgttatg 390
Query: 479 gtgcatgtgtgtggtggtcagttctctccttctaccatatggattctggggatttgaact 538
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 389 gtgcatgtgtgtggtggtcagttctctccttctaccatatgggttctggggatttgaact 330
Query: 539 tggggtgtcaggctgagtagcaggcaccgttacttactgagccatctcag 588
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tggggtgtcaggctgagtagcaggcaccgttacttactgagccatctcag 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 989
Length adjustment: 10
Effective length of query: 578
Effective length of database: 979
Effective search space: 565862
Effective search space used: 565862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
