Query= MSMg01no529_e13.b1 MSMg01no529_e13.b1 CHROMAT_FILE:
MSMg01no529_e13.b1 PHD_FILE: MSMg01no529_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:11 2005
(645 letters)
>mm_chr15_14017437_14018481
Length = 1045
Score = 1187 bits (614), Expect = 0.0
Identities = 633/644 (98%), Gaps = 9/644 (1%)
Strand = Plus / Plus
Query: 2 gagcctagagtcagtacctgatgcagaggccatagatggttgcagcttgctgactttctc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gagcctagagtcagtacctgatgcagaggccatagatggttgcagcttgctgactttctc 262
Query: 62 agcctgctttcatacagaacattggatcaccagcagggatggccccatctacaatgggtt 121
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 263 agcctgctttcatacagaacattggatcaccagcagggatggcccc-tctacaatgggtt 321
Query: 122 gggccctcacccataaatcactaatgagaaaatgccttacagggctgcctacaggctgat 181
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gggcccttgcccataaatcactaatgagaaaatgccttacagggctgcctacaggctgat 381
Query: 182 cttatggaggcattttctcaatcaaggccccattctttctgatgactctaatttgagtca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cttatggaggcattttctcaatcaaggccccattctttctgatgactctaatttgagtca 441
Query: 242 aggtgacataaaactagccagtaaaacttgagactcgtatagaagtcagagttcaattct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aggtgacataaaactagccagtaaaacttgagactcgtatagaagtcagagttcaattct 501
Query: 302 attaatttcctctttctattatgttgttccaagggatcaaactcaacctaagcaaacttg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 attaatttcctctttctattatgttgttccaagggatcaaactcaacctaagcaaacttg 561
Query: 362 accatcaggatggctctttagagatgtaacgtgtaatcatggtcatcagaaaccgcttat 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 accatcaggatggctctttagagatgtaacgtgtaatcatggtcatcagaaaccgcttat 621
Query: 422 tctgggataagtgactagatcacattttcatttcctttctaaattttctacatgcacatt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tctgggataagtgactagatcacattttcatttcctttctaaattttctacatgcacatt 681
Query: 482 taattattaagaaggtcctaatctgatgagggcaaaagcagtttctaggcttttatgcat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 taattattaagaaggtcctaatctgatgagggcaaaagcagtttctaggcttttatgcat 741
Query: 542 tctcagaattgtaagcgcctatacttcacatctgtggagatctaccctttatgttggagg 601
|||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 742 tctcagaattgtaagc--------ttcacatctgtggagatctaccctttatgttggagg 793
Query: 602 ctagataatcaagaatagttaaaagaaagagctattttgagaac 645
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 ctagataatcaagaatagttaaaagaaagagctattttgagaac 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_e13.g1 MSMg01no529_e13.g1 CHROMAT_FILE:
MSMg01no529_e13.g1 PHD_FILE: MSMg01no529_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:11 2005
(694 letters)
>mm_chr15_14146426_14147517
Length = 1092
Score = 978 bits (506), Expect = 0.0
Identities = 542/554 (97%), Gaps = 2/554 (0%)
Strand = Plus / Minus
Query: 5 agttcttaggaaacataaagaacaaatcacccttactgagtcatttgtgaggacagtaaa 64
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 552 agttcttaggaaacataaagaacaaatcacccttactgagtcatttatgaggacagtaaa 493
Query: 65 atcaactcaagagacaagctcagcgtatagctgctgtgaataaagtctttcagtgttgcc 124
|||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||
Sbjct: 492 atcaactcaagagacaagctcagcatatagctgctgtggataaagactttcagtgttgcc 433
Query: 125 tgcatgtgtctctgtgttctatccctattgaagctagaagaggccttccttgttattata 184
||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||
Sbjct: 432 tgcatgtgtctctgtgttctacccctattgaagctggaagaggccttccatgttattata 373
Query: 185 taaacttaccttcattttcaaaacttaatggctcaggtatggggtggaaagatggagtgg 244
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 372 taaac-taccttcattttcaaaacttaatgactcaggtatggggtggaaagatggagtgg 314
Query: 245 agtatcagcaacagcaacaaaattaatttaaaaatgatgaaatgaccacaacaaaagcca 304
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 313 agtatcagcaacagcaacaaaattaattt-aaaatgatgaaatgaccacaacaaaagcca 255
Query: 305 actttgtgtgtactagtaaaatattgtgtatttgtgtcttcgtacgattatgtgtatgtg 364
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 acattgtgtgtactagtaaaatattgtgtatttgtgtcttcgtacgattatgtgtatgtg 195
Query: 365 tgtgtttgtgtgtgtgtgtacacatgtacatgttacactttaagtcatcagcccatggaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 tgtgtttgtgtgtgtgtgtacacatgtacatgttacactttaagtcatcagcccatggaa 135
Query: 425 tgatgaagcagaaaagataagagagctaagcgagtgactggacaagagtgacaggcatag 484
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 134 tgatgaagcagaaaagataagagagctaagcgagtgactggacgagagtgacaggcatag 75
Query: 485 aaaagaaaagctgtggagatcagtctcatcgccctttcatgatctgaaaacagtcaagtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 aaaagaaaagctgtggagatcagtctcatcgccctttcatgatctgaaaacagtcaagtg 15
Query: 545 agggattcaaatat 558
||||||||||||||
Sbjct: 14 agggattcaaatat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1092
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1082
Effective search space: 740088
Effective search space used: 740088
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
