Query= MSMg01no529_n18.b1 MSMg01no529_n18.b1 CHROMAT_FILE:
MSMg01no529_n18.b1 PHD_FILE: MSMg01no529_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:59 2005
(672 letters)
>mm_chr15_28302942_28304013
Length = 1072
Score = 513 bits (265), Expect = e-149
Identities = 298/309 (96%)
Strand = Plus / Minus
Query: 4 ggaattcattgtaactgaattttcctcttctccagatcaactgtttctgcactgttgttt 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ggaattcattgtaacagaattttcctcttctccagatcaactgtttctgcactgttgttt 250
Query: 64 tgttttgtcttgtttttaaaactgttagttttgattacaaaatatatgtgagggctaatc 123
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 249 tgttttgtcttgtttttagaactgttagctttgattacaaaatatatgtgagggctaatc 190
Query: 124 ttgattttgcaattcaagtgaatttatagtcactacagaactacatgtctaagcatactg 183
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 189 ttgattttgcaattcaagtgaatttacagtcactatagaactacatgtctaagcatactg 130
Query: 184 tgagtgattttctagatgagatcaattggatggaaaggcccaccctaaactcaataaaca 243
||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 129 tgagtgattttctagatgagatcaattggatggaaagacccaccctaaactcggtaaaca 70
Query: 244 gtcaaacgccaggtgagcagcaggattcttttcgctctctgctcactaactgcaggagca 303
|||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 69 gtcaaatgccaggtgagcaccaggattcttttcgctctctgcccactaactgcaggagca 10
Query: 304 atgtgatca 312
|||||||||
Sbjct: 9 atgtgatca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_n18.g1 MSMg01no529_n18.g1 CHROMAT_FILE:
MSMg01no529_n18.g1 PHD_FILE: MSMg01no529_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:59 2005
(689 letters)
>mm_chr15_28166531_28167622
Length = 1092
Score = 1276 bits (660), Expect = 0.0
Identities = 683/692 (98%), Gaps = 3/692 (0%)
Strand = Plus / Plus
Query: 1 atttcagaatttttctgtgtgatttttggcttgccatttttccctattgtgtaaattcta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 atttcagaatttttctgtgtgatttttggcttgccatttttccctattgtgtaaattcca 260
Query: 61 atcatgaaaaatgttgctaagccagttacggtagttcatggctacaatcctcatacttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcatgaaaaatgttgctaagccagttacggtagttcatggctacaatcctcatacttca 320
Query: 121 gagatgaagagatgaggagttttctgactaattgaaatgattctgccccaaaccagaacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagatgaagagatgaggagttttctgactaattgaaatgattctgccccaaaccagaacg 380
Query: 181 atgtttacaaccataagaccat---acactgacttgtagatattttgggtcagaggggaa 237
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtttacaaccataagaccatcatacactgacttgtagatattttgggtcagaggggaa 440
Query: 238 tattccctgggtaaatgagacacagaagtctatttgtgtgattaattgatatttcatgca 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattccctgggtaaatgagacacagaagtctatttgtgtgattaattgatatttcatgca 500
Query: 298 tattatttgaatgggcttgtgaaactaccaaatgaccagaaacttttgtaatagacgttg 357
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 501 tattatttgaatgggcttgtgaaactaccaaatgatcagaaacttttgtaatagacgttg 560
Query: 358 ttcaagtagtgtaagaagagaggaaattatatattgacccagctcccagcatacaatatg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcaagtagtgtaagaagagaggaaattatatattgacccagctcccagcatacaatatg 620
Query: 418 gttctaaaaccagcgggcaccaacatctggctaatattgccctgtctatactctcgcttt 477
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttctaaaaccagcaggcaccaacatctggctaatattgccctgtctatactctcgcttt 680
Query: 478 taagagttatttatttttattttatttgcatggaagttttgcttgcatatatgatatctg 537
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taagagttatttattttaattttatttgcatggaagttttgcttgcatatatgatatctg 740
Query: 538 tgtgccatgtgcatgtgcagcatctgaatatgctagaagaggatactaggtcccatagac 597
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 741 tgtgccatgtgcatgtgcagcatctgaatatgctagaagaggatactaggtcccctagac 800
Query: 598 ctggagttccagatggtttttagttcttccgtgggtgctgggaatctaacctgggtcttc 657
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 801 ctggagttccagatggtttttagttcttccatgggtgctgggaatctaacctgggtcttc 860
Query: 658 cataagtacaagaagtgttcttcatttctgag 689
||||||||||||||||||||||||||||||||
Sbjct: 861 cataagtacaagaagtgttcttcatttctgag 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1092
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1082
Effective search space: 734678
Effective search space used: 734678
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
