ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTGCCCAGCTTTTAATTTTTTTCTATCTTTTATCATAAAAAAAAA
TTGCTTCAGAATCATCAAGATCAAATAGTAGAAATCATAATACTAGACAT
AAGATCACATTGAAAATAATGAAAATACTATTGATATGATATGGGGTTAT
GATTACTACATATTCAATGGTTGTTATATGGCAAATCAATCTTGATGGAA
AATATCTACAATCCTTTTATTTATATAAATAACAGCATAAGGCAGGTATT
AGTTTTATATGATACACCACATATACCAAATCAGAAAAGATTTCAGAACT
TATTGGGTACTTAGAAAAATAGAAAACACCAAAAATATAATTTTTAACAT
TGGAGATTAGATGAGATCAAATAACTGAATCTACTTTTTATCATCATAAT
AATTTTTAATACGCTGGAAATCTAACATAGGACCTCATATATTCAATTCA
GAAGCTGTTCAAACCCTTTATCAGTCTCCACCTCCTTTTAAAATTACCTG
TCACCTATTTTATACTCTGTGTACCTGAATTAAAGGTCCTCTAGTTAGAT
ACCATATACAATTTGTTTTCAGAAATTAGTTGGCATTTACTAAATAGGTT
ATGTTTATCAATAGACATCACATATGAAACTCCATATAATGGTTGATTAG
TAGTTGGTTAAAGAGCAAGTCACAATTTACACTGAGTAAAGTTTTCAGTG
TCATTGTGAAAGTAC

NCCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAGCTCTGTATCCCATT
ATTTAACTGGGTTATATGAGTTTTTGGAGGTTGACTTCTTGTGTTCTTTA
TAGATTTTGTATATTAGTCTTTGTAGCATGTAGAGTTAGTGAAGAATTTT
CCCCAATCTGTAGGTTACTGATTTGTCCTATTAATTGTGTCTTTTGCCTT
ACAGAAGCATTTTGGTTTCATGAGGCTCCATTTATCAATTGTTGACCTTA
GAGCCTGAGTCGTCATATTCTCTTTTATAATTAATTCAGAAAAAATATAT
ATTCATTTTTAAAATTAATTATTTTATGTATCTACATTCCAGACATTGCT
ACCCCTCCTGGTCCTACCTCCCACAGTTCCTCATCCCATTCTCTTTCCAC
TTTGCCTCTGAGATTATGTTCCCTCACTCTGGTATCCCCCTTCCCTGAGA
CCTCATGTCTCTACAGGATTATGTACATCATCTCCTACTCAGGCCAGAAA
GGCATTCCTCTGCTACATATGTGCCTGAGGATGCAGACCAACCTGTGTAT
GCTCCCAGTTTTGTAGCTTAGACTCTGGGAGCTCCCAGGGGTCCATGTTA
GCTCCCCTTCAGCTCCTTCAATCCTTCCCCCAATTCCTCCTCAGGGTCTC
TGACTACAGTCCAATATCTGGGTATAAGTATCTTCATCTGTCTCAATCAG
CTGCTGGTCGGGCCTCTCA

Query= MSMg01no530_d14.b1 MSMg01no530_d14.b1 CHROMAT_FILE:
MSMg01no530_d14.b1 PHD_FILE: MSMg01no530_d14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:28 2005
         (719 letters)



>mm_chr15_17462855_17463972
          Length = 1118

 Score = 1208 bits (625), Expect = 0.0
 Identities = 698/737 (94%), Gaps = 23/737 (3%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgcccagcttttaatttttttctatcttttatcataaaaaaaaattgcttcaga 64
           |||||||||||||| |||||| |||| ||||||||||||||| |||||||||||||||||
Sbjct: 830 gaattctgcccagcatttaatcttttcctatcttttatcatataaaaaaattgcttcaga 771

                                                                       
Query: 65  atcatcaagatcaaatagtagaaatcataatactagacataagatcacattgaaaataat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 atcatcaagatcaaatagtagaaatcataatactagacataagatcacattgaaaataat 711

                                                                       
Query: 125 gaaaatactattgatatgatatggggttatgattactacatattcaatggttgttatatg 184
           ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 710 gaaaatactattgatataatatggggttatgattactacatattcaatgattgttatatg 651

                                                                       
Query: 185 gcaaatcaatcttgatggaaaatatctacaatccttttatttatataaataacagcataa 244
           ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 650 gcaaatcaatcttcatggaaaatatctacaatcattttatttatataaataacagcataa 591

                                                                       
Query: 245 ggcaggtattagttttatatgatacaccacatataccaaatcagaaaagatttcagaact 304
           |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 590 ggcaggtattagttttatatgaaacatcacatataccaaatcagaaaagatttcagaact 531

                                                                       
Query: 305 tattgggtacttagaaaaatagaaaacaccaaaaatataatttttaacattggagattag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tattgggtacttagaaaaatagaaaacaccaaaaatataatttttaacattggagattag 471

                                                                       
Query: 365 atgagatcaaataactgaatctactttttatcatcataataatttttaatacgctggaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 470 atgagatcaaataactgaatctactttttatcatcataataatttttaatatgctggaaa 411

                                                                       
Query: 425 tctaacataggacctcatatattcaattcagaagctgttcaaaccctttatcagtctcca 484
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 410 tctaacataggacctcatatattcaattcacaagctgttcaaaccctttatcagtctcca 351

                                                                       
Query: 485 cctccttttaaaattacctgtcacctattttatactctgtgtacctgaattaaaggtcct 544
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 cctccttttaaaattacctctcacctattttatactctgtgtacctgaattaaaggtcct 291

                                                                       
Query: 545 ctagttagataccatatacaatttgttttcagaaattagttggcatttactaaataggtt 604
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 290 ctagttagataccatatacaatttgttttcagaaattagttgccatttactaaataggtt 231

                                                                       
Query: 605 atgtttatcaatagacatcaca-----------------------tatgaaactccatat 641
           |||||||||| |||||||||||                       |||||||||||||||
Sbjct: 230 atgtttatcattagacatcacaatgatcctcactgatcttgcagatatgaaactccatat 171

                                                                       
Query: 642 aatggttgattagtagttggttaaagagcaagtcacaatttacactgagtaaagttttca 701
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 170 aatggttgattagtagttggttaaagagcaagccacaatttacactgagtaaagttttca 111

                            
Query: 702 gtgtcattgtgaaagta 718
           |||||||||||||||||
Sbjct: 110 gtgtcattgtgaaagta 94


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 719
Length of database: 1118
Length adjustment: 10
Effective length of query: 709
Effective length of database: 1108
Effective search space:   785572
Effective search space used:   785572
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)