Query= MSMg01no530_m13.b1 MSMg01no530_m13.b1 CHROMAT_FILE:
MSMg01no530_m13.b1 PHD_FILE: MSMg01no530_m13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:13 2005
(512 letters)
>mm_chr15_68528260_68529171
Length = 912
Score = 669 bits (346), Expect = 0.0
Identities = 373/382 (97%), Gaps = 2/382 (0%)
Strand = Plus / Minus
Query: 132 cttatattcaaagatacagggactctcacctctcgtcagtttttcaaaagacagaagcta 191
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 912 cttatattcaaagatacagggactctcacctctcgtcagtttttcaaaagacagaaacta 853
Query: 192 ttacagagatcaataacggatcacattgcagagagtaatgatggtgtgctgcctacctcc 251
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct: 852 ttacagagatcaataacagatcacattgcagagagtaatgatggtgtgttgcctacctcc 793
Query: 252 agtccatacaactacaacacaaaccctatacctaaggctttgggaacactgtggaagaat 311
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 agtccatacatctacaacacaaaccctatacctaaggctttgggaacactgtggaagaat 733
Query: 312 aactggaagactcgaagaacactcttactggctgcaaaatggtcttctagacaaaagcat 371
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 aactggaagactcaaagaacactcttactggctgcaaaatggtcttctagacaaaagcat 673
Query: 372 ggtgcactaa-tggatctcaacagtatgaatactttcacaagaatttcataatgatatca 430
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ggtgcac-aagtggatctcaacagtatgaatactttcacaagaatttcataatgatatca 614
Query: 431 gtgtatataccaacaggggtgagggaactttcacaaggctctacccctgcataatgagct 490
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gtgtatataccaacatgggtgagggaactttcacaaggctctacccctgcataatgagct 554
Query: 491 ataggcagcctatgtctgcaga 512
|||||||||| |||||||||||
Sbjct: 553 ataggcagccaatgtctgcaga 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no530_m13.g1 MSMg01no530_m13.g1 CHROMAT_FILE:
MSMg01no530_m13.g1 PHD_FILE: MSMg01no530_m13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:13 2005
(443 letters)
>mm_chr15_68369042_68369884
Length = 843
Score = 787 bits (407), Expect = 0.0
Identities = 434/443 (97%)
Strand = Plus / Plus
Query: 1 tcattgctgctttgttcctaacaagggtgacacgtcttgtcaccaactcctgggagtctt 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattgctgctttgttcctaacaaaggtgacacgtcttgtcaccaactcctgggagtctt 260
Query: 61 cttttcaatgtccacttgtttgaaaaaagagcctctctttaagtttcatactccatgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttttcaatgtccacttgtttgaaaaaagagcctctctttaagtttcatactccatgtct 320
Query: 121 ccctccatgaaaatcttttttaactcttccaagaaaggagggttgttgcatctctgaatt 180
||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctctataaaaatctttttgaactcttccaagaaaggagggttgttgcatctctgaatt 380
Query: 181 cccaaaaattgtgtcccatttttaaaaataactcctaaggttctgggatgacagttaagc 240
||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccaaaaatcgtgtcccattttttaaaataactcctaaggttctgggatgacagttaagc 440
Query: 241 catatcatcccagatttcattttcttcgtctgtgaaatgggaaagcattttactcctcac 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catatcaccccagatttcattttcttcgtctgtgaaatgggaaagcattttactcctcac 500
Query: 301 ggcgactatatgtagttgtgtgagcctaggcagatcaactgggctggtgagtatgttgtc 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 ggcgactatatgtagttgtgtgagcctaggcagatcaactgggctggtaagtatgttgtc 560
Query: 361 aaacgtgccagtgagctttgcgatacaaagctacatttgctgccacactgtaaagcatca 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaacttgccagtgagctttgcgatacaaagctacatttgctgccacactgtaaagcatca 620
Query: 421 gtgagcttctccttcctataggt 443
|||||||||||||||||||||||
Sbjct: 621 gtgagcttctccttcctataggt 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
