Query= MSMg01no531_e08.b1 MSMg01no531_e08.b1 CHROMAT_FILE:
MSMg01no531_e08.b1 PHD_FILE: MSMg01no531_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:51 2005
(399 letters)
>mm_chr15_76837285_76838082
Length = 798
Score = 687 bits (355), Expect = 0.0
Identities = 388/401 (96%), Gaps = 5/401 (1%)
Strand = Plus / Minus
Query: 1 gagggaattgagggatcacatgaggccactggggagacaccaaccacccagggtccagag 60
||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct: 598 gagggaattgagggatcacatgaggtcaccggggagacaccaaccacccagggtccagag 539
Query: 61 tctagaacccacgaacacttggggaacaggttccattgtccctcctatgttttcatgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tctagaacccacgaacacttggggaacaggttccattgtccctcctatgttttcatgtga 479
Query: 121 cattttcagaggcatagagcaggtgaggaacttgcctgaggtgactgagaataggagctg 180
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||
Sbjct: 478 cattttcagaggcatagagcaggtaaggaacttgcctgaggtgactgagagtaggagctg 419
Query: 181 gagccaggacccaggcaaaggtcaagccccgtgaagctcattcagctctgagaagctcag 240
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 418 gagccaggacccaggcaaaggtcaacccccgtgaagctcattcagctctgagaagctcag 359
Query: 241 tttctttccattaacccttgaccctgggtgctgtgaggacccagaagcctctagagaggc 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 358 tttctttccattaacccttgaccccgggtgctgtgaggacccagaagcctctagagaggc 299
Query: 301 aagaacagtttgagggtccccccccc--aaggctccatctttgtcctgccgttgtctttg 358
|||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||||
Sbjct: 298 aagaacagcttgag---cccccccccccaaggctccatctttgtcctgccattgtctttg 242
Query: 359 acacagacaatagagcccctgagtcctttcctgtgcgcacc 399
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acacagacaatagagcccctgagtcctttcctgtgcgcacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 798
Length adjustment: 9
Effective length of query: 390
Effective length of database: 789
Effective search space: 307710
Effective search space used: 307710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_e08.g1 MSMg01no531_e08.g1 CHROMAT_FILE:
MSMg01no531_e08.g1 PHD_FILE: MSMg01no531_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:51 2005
(147 letters)
>mm_chr15_76689526_76690072
Length = 547
Score = 269 bits (139), Expect = 6e-77
Identities = 145/147 (98%)
Strand = Plus / Plus
Query: 1 tggtttcccttttaagtgacattactcaagatctccccaaggggctcagacacctattag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtttcccttttaagtgacattactcaagatctccccaaggggctcagacacctattag 260
Query: 61 ctgccaggaggcctaaacaatcagaaaaagcgttgtcatcaacgcagcctcctcttccac 120
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 ctgccaggaggcctaaccaatcagaaaaagcgtcgtcatcaacgcagcctcctcttccac 320
Query: 121 caaagcaaccagttctctgcttcacac 147
|||||||||||||||||||||||||||
Sbjct: 321 caaagcaaccagttctctgcttcacac 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 147
Length of database: 547
Length adjustment: 8
Effective length of query: 139
Effective length of database: 539
Effective search space: 74921
Effective search space used: 74921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
