Query= MSMg01no533_d07.b1 MSMg01no533_d07.b1 CHROMAT_FILE:
MSMg01no533_d07.b1 PHD_FILE: MSMg01no533_d07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:21 2005
(577 letters)
>mm_chr15_60717763_60718739
Length = 977
Score = 1100 bits (569), Expect = 0.0
Identities = 575/577 (99%)
Strand = Plus / Minus
Query: 1 ttccaagaagattaaagaatcataagatgtataagaacccagcagaggtaactctcagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ttccaagaagattaaagaatcataagatgtataagaacccagcagaggtaactctcagca 718
Query: 61 tgttgtggattagtctgaattgcactgtttaatccagaaattaacagccaacagaaaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgttgtggattagtctgaattgcactgtttaatccagaaattaacagccaacagaaaatg 658
Query: 121 agctgtgggtactagtgtagggaaagaatgggaaaagagatattcaactttcaaagatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 agctgtgggtactagtgtagggaaagaatgggaaaagagatattcaactttcaaagatgc 598
Query: 181 ttgcttctgtgaatatagaatgaccttgccacagacctgcaaggcagatgctcagggcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ttgcttctgtgaatatagaatgaccttgccacagacctgcaaggcagatgctcagggcag 538
Query: 241 atggaatgatctggtcccagtagggtcgttttcaagcaatctgttctgcatgatatggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atggaatgatctggtcccagtagggtcgttttcaagcaatctgttctgcatgatatggac 478
Query: 301 tgggatgtgagggttcaagataagaaggaaatagggaaagacagagatcaaatgagagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tgggatgtgagggttcaagataagaaggaaatagggaaagacagagatcaaatgagagaa 418
Query: 361 aggtagtaatggagaatgaagaagaaaccacgaggatttaacccgtcaaatgaggtgtaa 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 417 aggtagtaatggagaatgaagaagaaaccacgaggatttaacgcgtcaaatgaggtgtaa 358
Query: 421 ttttaccattgaattgttgacaaaattcctccccaataagtgaaagtgtctcttctacat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttttaccattgaattgttgacaaaattcctccccaataagtgaaagtgtctcttctacat 298
Query: 481 attcacctgaaatttaaaatataaaggagggataaaatcaaaaattttgtcttacacggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 297 attcacctgaaatttaaaatataaaggagggataaaatcaaaaattttgtcttacacagc 238
Query: 541 aaagaagctgaggagaatttgtaagaataaagtgcag 577
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 aaagaagctgaggagaatttgtaagaataaagtgcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no533_d07.g1 MSMg01no533_d07.g1 CHROMAT_FILE:
MSMg01no533_d07.g1 PHD_FILE: MSMg01no533_d07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:21 2005
(375 letters)
>mm_chr15_60538120_60538895
Length = 776
Score = 673 bits (348), Expect = 0.0
Identities = 369/378 (97%), Gaps = 5/378 (1%)
Strand = Plus / Plus
Query: 1 aactgtataaataaaggatcattgcaattaagtgggttttttttt---cactatatctaa 57
||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||
Sbjct: 201 aactgtataaataaaggatcattgcgattaagtg--ttttttttttttcactatatctaa 258
Query: 58 ctttatagatcctctggggctctttcctccagtctctgtgcctgcaaggcatgtgcttta 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctttatagatcctctggggctctttcctccagtctctgtgcctgcaaggcatgtgcttta 318
Query: 118 tccactaagtcatcgccccacctctccagatgacttgtgtataggaattaatgttcatgc 177
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 319 tccactaagtcatcgccccacctctccagctgacttgtgtataggaattaatgttcatgc 378
Query: 178 tgggtgtttgtgatgtatggctttaatcctagcattggagaggcagatgcaagtggatca 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tgggtgtttgtgatgtatggctttaatcctagcattggagaggcagatgcaagtggatca 438
Query: 238 ctgtgtgttaaagcccaaccttgtgtacatagtgagttacaggccagtcagggacacata 297
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 439 ctgtgtgttaaagcccaacctcgtgtacatagtgagttacaggctagtcagggacacata 498
Query: 298 gtgagactgtctttaaataaagatgggagagagagagagggtgggggaaaggaaggaagg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtgagactgtctttaaataaagatgggagagagagagagggtgggggaaaggaaggaagg 558
Query: 358 aaagaaggaaggaaggaa 375
||||||||||||||||||
Sbjct: 559 aaagaaggaaggaaggaa 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 776
Length adjustment: 9
Effective length of query: 366
Effective length of database: 767
Effective search space: 280722
Effective search space used: 280722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
