ACTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATTTATATTATTTAGGATTTTAAGACTCTGTCAGTCCAGTATT
CCATCAATTCAATAAGAATATACAGAATAGCTGATGAAATATTATGCCCT
GAGGATGAAAAGCAAAATAATACAATAATTAGGAATTTGGTTTTATGAAT
TAGGAATTTGTTCTTGATTCACATCTTACTTGATCTTACAATTTGTTTTC
TTGTCTCTTTGTACCTGAGATGTTGCTGTCATTCAAGTAAAACCTACTTT
GTATCATTGTTATAAAGATTTAATGAGGTAATCATTATAAAGAAGACCTA
CCCTGAGGCTGGATCATAGTAAGATTCCAATAATTGTATATCTTATTAAT
AGCAATCTATGAAAATCATTTATCTGGTCCTTTTAAACAAGATGCATAGG
TATACTTCTATGTGTTGGGCAAACCTTAAAGAAAGACACTTTAATCTTAT
CAAAAGAGGTAAGCTTAAGAGTATCAAATCTGAACTTCCAATTCTTGCCA
TGGAAAAGCCATTTGAACTTGGAGACTAATAGTCTACTCTCCAAGGATTT
TTCTCACAGATGCTCACAGATTTTGGAAGAAAGAACCTCTTTNAATCTTC
GTGTTACATAATTTCTTCATTTCTAAACAGGTCAGAATTAAGGCCAGTAA
AGCTTGGCAGTCATTCCCTGCTGTCCACTCTCCCTATTATTAACACCAGA
GGACAACAATG

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAGAACTTTTATCAT
GAATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGA
TCATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATA
GATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTA
GTCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAA
TTTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAG
TTCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATTGT
GGCTTCATAGAATGAGTTGCGTAGAGTTCCTTCTACTTCTATTTTGTGGA
ATAGTTTGTGCAGATCTGGAATTAGATCTTCTTTGAAGGTGTGGTAGAAC
TCTGCACTAAACCCATCCTGGTCCTGTCCTTTTTTTGGCTGGGAGACTAT
TAATGACTGCTTCTACTTCTTTAGGGTATATGGGACTGTTTAGATCATTA
ACTTGATCCTGATTTAACTTTGGTACCTGCTATCTGTCTAGAAATTTATC
CATTTCATCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGG
ATCTGATGGTGTTTTGGATTTCTTCAGGATCTGNTGTTATGTCTCCCTTT
TCATTTCTG

Query= MSMg01no535_m03.b1 MSMg01no535_m03.b1 CHROMAT_FILE:
MSMg01no535_m03.b1 PHD_FILE: MSMg01no535_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:13:40 2005
         (635 letters)



>mm_chr15_43677541_43678575
          Length = 1035

 Score = 1185 bits (613), Expect = 0.0
 Identities = 627/632 (99%), Gaps = 2/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatttatattatttaggattttaagactctgtcagtccagtattccatcaattca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttatattatttaggattttaagactctgtcagtccagtattccatcaattca 264

                                                                       
Query: 65  ataagaatatacagaatagctgatgaaatattatgccctgaggatgaaaagcaaaataat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 ataagaatatacagaatagctgatgaaatattatgccctgaggatgaaaagcaaaatgat 324

                                                                       
Query: 125 acaataattaggaatttggttttatgaattaggaatttgttc-ttgattcacatcttact 183
           |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 325 acaataattaggaatttggttttatgaattaggaattt-ttccttgattcacatcttact 383

                                                                       
Query: 184 tgatcttacaatttgttttcttgtctctttgtacctgagatgttgctgtcattcaagtaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgatcttacaatttgttttcttgtctctttgtacctgagatgttgctgtcattcaagtaa 443

                                                                       
Query: 244 aacctactttgtatcattgttataaagatttaatgaggtaatcattataaagaagaccta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacctactttgtatcattgttataaagatttaatgaggtaatcattataaagaagaccta 503

                                                                       
Query: 304 ccctgaggctggatcatagtaagattccaataattgtatatcttattaatagcaatctat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ccctgaggctggatcatagtaagattccaataattgtatatcttattaatagcaatctat 563

                                                                       
Query: 364 gaaaatcatttatctggtccttttaaacaagatgcataggtatacttctatgtgttgggc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaaaatcatttatctggtccttttaaacaagatgcataggtatacttctatgtgttgggc 623

                                                                       
Query: 424 aaaccttaaagaaagacactttaatcttatcaaaagaggtaagcttaagagtatcaaatc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaaccttaaagaaagacactttaatcttatcaaaagaggtaagcttaagagtatcaaatc 683

                                                                       
Query: 484 tgaacttccaattcttgccatggaaaagccatttgaacttggagactaatagtctactct 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgaacttccaattcttgccatggaaaagccatttgaacttggagactaatagtctactct 743

                                                                       
Query: 544 ccaaggatttttctcacagatgctcacagattttggaagaaagaacctctttnaatcttc 603
           ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 744 ccaaggattttgctcacagatgctcacagattttggaagaaagaacctctttaaatcttc 803

                                           
Query: 604 gtgttacataatttcttcatttctaaacaggt 635
           ||||||||||||||||||||||||||||||||
Sbjct: 804 gtgttacataatttcttcatttctaaacaggt 835


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space:   640625
Effective search space used:   640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)