NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCACTGTTCTTACTCTACCATCCTGAAACAATTGTCCCAATAGAA
TAGTAGAATGTCCTCTTGAATACTCATAAAGAACACTTGAAGAGTAGAAA
GACCCTATAAACTGAGATATGTTTCCTCAGGATTTTCTTTAGTTCCTCTA
AATCCTTTTACATCATAAAAATATTGTGATTTCTTTGAAAGATCAATTTT
CTTCCTCCCTGGGTCCATTAATCCAGGGATACATTTAGAATAGACACCAC
CAAATTCTTCTCACATTGAACCACTCTAAATATTTTTAATCTTTGTCCCT
GAGACCTTGTGTTTGTATTGGCCTAGATATTATATATTGAAGTGGAAGAA
TGTTTCTACCTACATACACACTAATTCTTTTGAACTGAATAGTAAGTCCA
GTACTGGCTTACTTTGGCTTCTCACATACCTGCCATGACAGGCAATCAAA
AGTGTTGCTGTATTCACTCAATTTTGATCCAGAGCACTAATGTTGTATGA
GACTGATACCACACATCACAGAGGAAGAGAAGTTATAGAACAATGGAGGC
TCCCCAAGTTATCCTGCAGCATTATACACTCCTATAATGAAAGTCAATGA
AAACGAGGAAAAGGGAACAAAACAAAACGAACAAAAGCCCGCACGGAACT
TAAAAATGTCTCCTTTGTCAAAAAAGAGGCAGTGGTGTGTGGCTCACAC

NNCCGATGCTGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXGGTTCAGAGTCTGTAAAACTGATTTA
AAATTGTGTGCCTGCCTGATACTCCAACAGTGCTTCTATGAAGTTTTGTT
TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTGTGTTG
TGTTGTGTTGTGTTGTGTTGTGTTGTGTTTTGTTTTCCTGAATGAAGAAA
ACAAAATTCAGCTTCTGGTCATCTGGCCTTCTTCTCAGGTGAATGTTACT
GATTGCTAAGAAGGCACAGGTAAGTCTTCATCTAGTGGGACCAGGTAGCA
AGCAATTGCAGTCTCACAATTCTTTTGAACTAAGGTCCTCCAAAATTGCT
TGCCTCTGTTCCATCATACTGTTGAAAACAAATCTTCCAGTGAATCTAGT
TCTTTCAGTGTCCTGGGTACAGTTTCATGTCTTTCTTCTACAGGACTGGA
CCAGAGTCTTTTACATGACATGATTCTGAAAATAATCTAAAATGGAGTGG
TTAAAGAACTTCGTAAGAGCTATCTCTTCTTTCTTGGTAAAGAAAGCTTT
ACCAAGTTGAGCTTGGCATAATGATATTTTATTNCACGTTCAAGAATATG
GCAAATAACTCCTTCAGTAGAATTTTTGTGCCTTCATTAAGACAGTAAGA
ACAAAACAATTCTCAAAGTGCCCTAAGAATTAAAAAGAGCCTGTA

Query= MSMg01no537_e08.g1 MSMg01no537_e08.g1 CHROMAT_FILE:
MSMg01no537_e08.g1 PHD_FILE: MSMg01no537_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:36 2005
         (640 letters)



>mm_chr15_14230495_14231534
          Length = 1040

 Score = 1089 bits (563), Expect = 0.0
 Identities = 607/641 (94%), Gaps = 32/641 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   ggttcagagtctgtaaaactgatttaaaattgtgtgcctgcctgatactccaacagtgct 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 ggttcagaatctgtaaaactgatttaaaattgtgtgcctgcctgatactccaacagtgct 913

                                                                       
Query: 61  tctatgaagttttgtttgttttgttttgttttgttttgttttgttttgttttgttttgtt 120
           |||||||||||||||||||||||||||||||||||||||||                   
Sbjct: 912 tctatgaagttttgtttgttttgttttgttttgttttgttt------------------- 872

                                                                       
Query: 121 gtgttgtgttgtgttgtgttgtgttgtgttgtgttttgttttcctgaatgaagaaaacaa 180
                      |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 -----------tgttgtgttgtgttgtgttgtgttttgttttcctgaatgaagaaaacaa 823

                                                                       
Query: 181 aattcagcttctggtcatctggccttcttctcaggtgaatgttactgattgctaagaagg 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 822 aattcagcttctggtcatctggccttcttctcaggtgaatgttgctgattgctaagaagg 763

                                                                       
Query: 241 cacaggtaagtcttcatctagtgggaccaggtagcaagcaattgcagtctcacaattctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 cacaggtaagtcttcatctagtgggaccaggtagcaagcaattgcagtctcacaattctt 703

                                                                       
Query: 301 ttgaactaaggtcctccaaaattgcttgcctctgttccatcatactgttgaaaacaaatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ttgaactaaggtcctccaaaattgcttgcctctgttccatcatactgttgaaaacaaatc 643

                                                                       
Query: 361 ttccagtgaatctagttctttcagtgtcctgggtacagtttcatgtctttcttctacagg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ttccagtgaatctagttctttcagtgtcctgggtacagtttcatgtctttcttctacagg 583

                                                                       
Query: 421 actggaccagagtcttttacatgacatgattctgaaaataatctaaaatggagtggttaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 actggaccagagtcttttacatgacatgattctgaaaataatctaaaatggagtggttaa 523

                                                                       
Query: 481 agaacttcgtaagagctatctcttctttcttggtaaagaaagctttaccaagttgagctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agaacttcgtaagagctatctcttctttcttggtaaagaaagctttaccaagttgagctt 463

                                                                       
Query: 541 ggcataatgatattttattnc-acgttcaagaatatggcaaataactccttcagtagaat 599
           ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ggcataatgatattttatt-caacgttcaagaatatggcaaataactccttcagtagaat 404

                                                    
Query: 600 ttttgtgccttcattaagacagtaagaacaaaacaattctc 640
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ttttgtgccttcattaagacagtaagaacaaaacaattctc 363


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 6
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)