Query= MSMg01no537_e20.b1 MSMg01no537_e20.b1 CHROMAT_FILE:
MSMg01no537_e20.b1 PHD_FILE: MSMg01no537_e20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:38 2005
(636 letters)
>mm_chr15_88057179_88058214
Length = 1036
Score = 1154 bits (597), Expect = 0.0
Identities = 624/633 (98%)
Strand = Plus / Minus
Query: 4 ggaattctgtaggattctgttgcagggccattctctttactagacactcagcattacaat 63
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ggaattctgtcggaagctgttgcagggccattctctttactagacactcagcattacaat 777
Query: 64 aaagaaattggcaaagcacttgctttcctgtaaaaatttcccaaacagcctatgtttatc 123
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 776 aaagaaattggcaaagcacttgctttcctgtaaaaacttcccaaacagcctatgtttatc 717
Query: 124 tctgaggcaatggagccatggtcaacagtgcagaggcaggaggtgtgagtcatgaggagt 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 716 tctgaggcaatggagccatggtcaacagtgcagaggcaggaggcgtgagtcatgaggagt 657
Query: 184 gcccgggcacagaaaggctctcaggccattgctgctcatgaaagaggtggcatctggctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gcccgggcacagaaaggctctcaggccattgctgctcatgaaagaggtggcatctggctc 597
Query: 244 ctaggtaccctggcaatattcattgcctctcagagctggaagattctgaaaactgctgca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ctaggtaccctggcaatattcattgcctctcagagctggaagattctgaaaactgctgca 537
Query: 304 taagaaacttgaaactttcccccagtaggctctgacatcatctgtggccctgaccatgcc 363
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 taagaaacctgaaactttcccccagtaggctctgacatcatctgtggccctgaccatgcc 477
Query: 364 cctcctgcatgtatgatctccttgtccacaagacctcttacatctgagagcagtatttgc 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cctcctgcatgcatgatctccttgtccacaagacctcttacatctgagagcagtatttgc 417
Query: 424 agcctgtggtccttcctcccacagcctctcccctcacttactccaaagtctgtttcctct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agcctgtggtccttcctcccacagcctctcccctcacttactccaaagtctgtttcctct 357
Query: 484 tatttccccaaggtccccttgaaatcaactctctctgcagctcaaattggcagagacaga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tatttccccaaggtccccttgaaatcaactctctctgcagctcaaattggcagagacaga 297
Query: 544 aagaaagcgtgtttttcttcctggactgaattgcagcatcttcagaggctatccctcaac 603
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 296 aagaaaacgtgtttttcttcctggattgaattgcagcatcttcagaggctatccctcaac 237
Query: 604 ctgtgttcccctgtgtccagatgggtttctgtg 636
|||||||||||||||||||||||||||||||||
Sbjct: 236 ctgtgttcccctgtgtccagatgggtttctgtg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_e20.g1 MSMg01no537_e20.g1 CHROMAT_FILE:
MSMg01no537_e20.g1 PHD_FILE: MSMg01no537_e20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:38 2005
(511 letters)
>mm_chr15_87939264_87940174
Length = 911
Score = 891 bits (461), Expect = 0.0
Identities = 496/514 (96%), Gaps = 13/514 (2%)
Strand = Plus / Plus
Query: 1 ctcacagaggaatctctcagctgagattttgttggatgattcagggctgtgtcaggttga 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 ctcacagaggaatctctcagctgagattttgttggatgactcagggctgtgtcaggttga 260
Query: 61 cagctgtagctgactaggacacataaccttttgtttgctattttctgaagtactaaatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagctgtagctgactaggacacataaccttttgtttgctattttctgaagtactaaatat 320
Query: 121 acacattcatgttgagcaatgcctcagaatccactggaccctaaaaaacccaaaatctat 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 acacattcatgttgagcaatgcctcagaatccactggaccctaaaaaccccaaaatctat 380
Query: 181 ccatgtctgtgcagat-gacccttatata--aatccatagtttctgcgtgtaacctatgc 237
||||||||||||| || | ||||||| |||||||||||||||||||||||||||||
Sbjct: 381 ccatgtctgtgcatatag----ttatatataaatccatagtttctgcgtgtaacctatgc 436
Query: 238 acgtcctcttaaaacccttaatcattctaggttacttatacctaatacagaataaatgct 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 acgtcctcttaaaacccttaatcattctaggttacttatacctaatacagaataaatgct 496
Query: 298 gagcaaatatgtactctgggtggccaattgcaagaagaaagtctgcgtaggttaaataca 357
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 497 gagcaaatatgtactctgggtggccaattgcaagaagaaaatctgcgtaggttaaataca 556
Query: 358 ggtgaggtcttgctccttaatattccagatccttgatttgaccaattctgtgggtttata 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ggtgaggtcttgctccttaatattccagatccttgatttgaccaattctgtgggtttata 616
Query: 418 tggagacatagagactggctatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 477
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 617 tggagacatagagactggct------gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 670
Query: 478 gtgtgtgtgtgtgtgtgctcatgncctcacatgt 511
||||||||||||||||||||||| ||||||||||
Sbjct: 671 gtgtgtgtgtgtgtgtgctcatgtcctcacatgt 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
