Query= MSMg01no537_j11.b1 MSMg01no537_j11.b1 CHROMAT_FILE:
MSMg01no537_j11.b1 PHD_FILE: MSMg01no537_j11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:59 2005
(544 letters)
>mm_chr15_75916903_75917846
Length = 944
Score = 1015 bits (525), Expect = 0.0
Identities = 537/541 (99%)
Strand = Plus / Plus
Query: 4 ggaattccctggccttgccttcaactccaagctatctagtctacagttctccaatcaggt 63
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccctggccatgggttcaactccaagctatctagtctacagttctccaatcaggt 263
Query: 64 caggtctggtctgcctgatgcccagcactgtgacacctgaattcaggctccttccctagg 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 264 caggtctggtctgcctgatgcccagcactgtgacacctgagttcaggctccttccctagg 323
Query: 124 tttctatgccacctgaaggcatggctgttgtctagtaccagatggagcggttcccctaac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttctatgccacctgaaggcatggctgttgtctagtaccagatggagcggttcccctaac 383
Query: 184 tgacctgtatccactctcgtccaggctcagggctccatcaccaccccagggtcccacact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgacctgtatccactctcgtccaggctcagggctccatcaccaccccagggtcccacact 443
Query: 244 gctgcagaaagctggggggtgggggtgtcttcactagcagggcctgtgttcagttccagg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctgcagaaagctggggggtgggggtgtcttcactagcagggcctgtgttcagttccagg 503
Query: 304 gaacacaggcagaaggcagctttgagcagtgtgggggctctttgccaagtggacaaccct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaacacaggcagaaggcagctttgagcagtgtgggggctctttgccaagtggacaaccct 563
Query: 364 gagcccctgtatctctgctgggccgtcaggactgggaaggtcacgcttgcgtccctcggt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagcccctgtatctctgctgggccgtcaggactgggaaggtcacgcttgcgtccctcggt 623
Query: 424 acttgagaaaagtggtctccagaaaggctgctagctttgtcctgtcatcctgcagtggat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acttgagaaaagtggtctccagaaaggctgctagctttgtcctgtcatcctgcagtggat 683
Query: 484 gagtagggaagcatggtagtaccgggcagctcggcagaccctgcacctttccacacccaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gagtagggaagcatggtagtaccgggcagctcggcagaccctgcacctttccacacccaa 743
Query: 544 a 544
|
Sbjct: 744 a 744
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space: 498756
Effective search space used: 498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_j11.g1 MSMg01no537_j11.g1 CHROMAT_FILE:
MSMg01no537_j11.g1 PHD_FILE: MSMg01no537_j11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:00 2005
(586 letters)
>mm_chr15_76069765_76070754
Length = 990
Score = 1122 bits (580), Expect = 0.0
Identities = 586/590 (99%), Gaps = 4/590 (0%)
Strand = Plus / Minus
Query: 1 ccaggagttccaagatgtggtgcgggccttttatagcaccctggatgctgtccacggcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 ccaggagttccaagatgtggtgcgggccttttatagcaccctggatgctgtccacggcag 731
Query: 61 gatccgcattgttcgagtgagttcatgtcctgtgttgctggccttgtgcctggtgtacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gatccgcattgttcgagtgagttcatgtcctgtgttgctggccttgtgcctggtgtacag 671
Query: 121 aactcttctttatattagtgttggttgaccaaaagctgcttaaagtggatcttcgaaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aactcttctttatattagtgttggttgaccaaaagctgcttaaagtggatcttcgaaagt 611
Query: 181 ggatagaatggatctccatatccatgcctggctctagggccgtggacatgaccgggggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggatagaatggatctccatatccatgcctggctctagggccgtggacatgaccgggggca 551
Query: 241 ttgagggagtgaagaaaagacaaacacagggttgcacaggatgctgggatgaggtctggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ttgagggagtgaagaaaagacaaacacagggttgcacaggatgctgggatgaggtctggg 491
Query: 301 ctcttagatggagaaacttcagcacctcagagttgagtgtcgttatcatatggagtggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ctcttagatggagaaacttcagcacctcagagttgagtgtcgttatcatatggagtggac 431
Query: 361 caggaagtggggttat----tgcagctgcacaaggaggcagggttattatatacagataa 416
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 caggaagtggggttattgcatgcagctgcacaaggaggcagggttattatatacagataa 371
Query: 417 acacggatttgtggattgggaaggcaggtttagcaaatctctgttgggagtagtctttgg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 acacggatttgtggattgggaaggcaggtttagcaaatctctgttgggagtagtctttgg 311
Query: 477 gcagtaaatattctagcagagaaagctatgggggacatttttctgcacacaccatcaata 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcagtaaatattctagcagagaaagctatgggggacatttttctgcacacaccatcaata 251
Query: 537 tccataattggacaagaggaaggctttgccatgcctctgaatgtttacgg 586
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tccataattggacaagaggaaggctttgccatgcctctgaatgtttacgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 990
Length adjustment: 10
Effective length of query: 576
Effective length of database: 980
Effective search space: 564480
Effective search space used: 564480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
