Query= MSMg01no537_l18.b1 MSMg01no537_l18.b1 CHROMAT_FILE:
MSMg01no537_l18.b1 PHD_FILE: MSMg01no537_l18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:11 2005
(572 letters)
>mm_chr15_52824132_52825103
Length = 972
Score = 878 bits (454), Expect = 0.0
Identities = 472/478 (98%)
Strand = Plus / Minus
Query: 5 gaattcactaggtatgtctgttggccttggacctggaattctctgttctgaacttaatga 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gaattcactaggtaggtttgttggccttggacctggaattctctgttctgaacttaatga 419
Query: 65 gggttgtggtttcaagtgtataccgccacacctggtattcatgtcactcctatttggcaa 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 418 gggttgtggtttcaagtgtataccaccacacctggtattcatgtcactcctatttggcaa 359
Query: 125 gatacatgcaggagacaattctgttttattttatagtgaattaaggtttatttgaagcat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gatacatgcaggagacaattctgttttattttatagtgaattaaggtttatttgaagcat 299
Query: 185 caaatttgagatcccctggaaaatacaaattcaagagatacatattcctattttatgcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 caaatttgagatcccctggaaaatacaaattcaagagatacatattcctattttatgcaa 239
Query: 245 gagctcagttcttgaggaaaaattgaatccatgatgatcttgaacaaattctctaacttc 304
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 238 gagctcagttcttgaggaaaaattgaatccatgatgttcttgaacaaattctctaacttc 179
Query: 305 tctgaatgtcaatttcttctttgagaaaatgagataatataaaacatacacctttttcca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 tctgaatgtcaatttcttctttgagaaaatgagataatataaaacatacacctttttcca 119
Query: 365 agagtggtgagaactgtgaagttattcatataaatcattagcacagtacttgccattcag 424
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 118 agagtggtgagaactgtgaagttattcatataaatcattagcacagcacttgtcattcag 59
Query: 425 tagtactttatccacgttaactgcagtttaatatcaccaatattgtcaatctgtcatg 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 tagtactttatccacgttaactgcagtttaatatcaccaatattgtcaatctgtcatg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no537_l18.g1 MSMg01no537_l18.g1 CHROMAT_FILE:
MSMg01no537_l18.g1 PHD_FILE: MSMg01no537_l18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:11 2005
(656 letters)
>mm_chr10_74325317_74326369
Length = 1053
Score = 302 bits (156), Expect = 7e-86
Identities = 483/608 (79%), Gaps = 57/608 (9%)
Strand = Plus / Plus
Query: 84 ttcttttcttctttcctttctttttacatgagaggatatttttattattttcctacat-- 141
||||||| || ||| ||| ||||||||||| ||| |||||||||| |||||||| ||
Sbjct: 268 ttcttttttttttt--tttttttttacatgaaagggtatttttatt-ttttcctatatac 324
Query: 142 --accatcttaatga--atacaccatgcacattttcccagctggc-aataagacacaagg 196
|||| |||||||| | |||||| |||||| | |||||||| |||||||||||| |
Sbjct: 325 caaccaccttaatgatggt--accatgtacatttactcagctggcaaataagacacaaag 382
Query: 197 caaaattttcttgatgct-gggagaatcaagagcagtcacctgtgtttgggaggattcag 255
||||| |||| || | | ||| |||| | ||| ||||| |||| ||||||||||||| |
Sbjct: 383 caaaa-tttcccgaagttcggg-gaattaggagtagtcatctgtttttgggaggattctg 440
Query: 256 tttcttatgac-acctgtgact-ctgtctgtgcaggtaccagcgatgctttgtagtgaag 313
||||||| ||| | |||||| | ||||| |||| |||||||||||||||| || ||| ||
Sbjct: 441 tttcttacgacga-ctgtga-tactgtccgtgcgggtaccagcgatgcttcgtggtgtag 498
Query: 314 aacacctcgc-cgagtttttctatcctgggcccttgctcaa--gtcatttgtgttttc-- 368
||||||| || | |||| ||||| | ||||||||||||| | | | ||| | ||||
Sbjct: 499 aacaccttgctc-agttgttctaacatgggcccttgctccagcggc--ttgcgctttcta 555
Query: 369 -cttctaa-tatggttttcagcacttat--tcgtgtgtttcctcctta-ta-g-aaaaga 421
||||||| | ||| |||| | | | | ||||| |||||||| ||| || | | ||||
Sbjct: 556 acttctaact-tggctttcggga--tctgctcgtgggtttcctcattattatgcagaaga 612
Query: 422 tctggttgagggat--------ag-gttcataggggatgtccacagaagggtggtagtag 472
||||| |||||| | || |||||||||||||||||||||||||||| ||||
Sbjct: 613 tctggctgaggggtgggtttggagtgttcataggggatgtccacagaagggtg---gtag 669
Query: 473 cacacaattgttttgcagtcagatgtcaaagcaaactctaccttgcaattgtagtcatct 532
||||| ||||| ||| ||| | |||||| || | || |||| |||||||||||||||
Sbjct: 670 cacactattgtcctgccgtcggctgtcaaggcgaggtccacctggcaattgtagtcatcc 729
Query: 533 ggaatagaagaatatgtagacttgtgacaaacactagataaaggtccattttggattgga 592
|||| |||||| ||||| || ||||||||| ||||||| |||| ||| ||||||||||||
Sbjct: 730 ggaagagaagagtatgtggatttgtgacaagcactagacaaagctccgttttggattgga 789
Query: 593 aataaatgcttccagataggtctgtttgatatc-cccaattttattgccaccatc---at 648
||||||||||||||||||| ||||||||||||| |||| ||||| ||| ||| | ||
Sbjct: 790 aataaatgcttccagatagttctgtttgatatcgccca-ttttactgc-acc--cgccat 845
Query: 649 gatcctta 656
||||||||
Sbjct: 846 gatcctta 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1053
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1043
Effective search space: 673778
Effective search space used: 673778
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
