XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAA
TTCTTCATCTTCACAAAATGACATTTAAAGCAAAGTTTCACACTACAGTA
CACATAAAATTGGTAAAATGTTATGTCAGATGTTTTAAGGAAAGAAAAAA
TCATAGTGTGTGCCAGACAAGGTTAAGAGTGTCTTGAAAGATACCTAGAA
AGTTCTTTGTTGGGAGAAGATGCTTTTAACTTGGGTTTGGAGATACCTTG
CTGGTAACTAAAAGAAAGCTAAAGTTTAGGGTCTCCACTTCATTTTACAT
GTACCTCCTCTGTCTTGAAATTGAGGGTCAGATTCCTGCTAAACCCTGCT
TGTAAGCAAGTCAATCATTTAAGACATGCCTGTCTAAAACACATACACAG
CTTATTAGTTCCAAATTTACTACTCTACCCCATCTCTGTAGAGGAATTTT
TATCTAGCAACATGGCTACTCTGGCAAGGGATCATATCCAAATATATTCC
AGGTCTGTGTGATGTGGCTGCAATGACACACCTTTAATCCTAAACAATGA
GGATAAGGTTAGTGTGCAGAAAGAAGTAGCCATGTTTGAAAGTAACATCT
AATTTAGTCATGAATCTGAGAAAGATTTGACAAAATGAGTCAAAGATGGG
ATATGCCCAATTTTCACAAGAACAAGAAAGAAAGAGATACTTAAGAGCAG
CACAGAGTCAACACAATGTGTGCAGTAGAGTTGAATT

TGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCTTTTTGCCTCAGATATACAATTATTCTGTATTT
GATGCCTTTATACTTGATACCTTTAAACTGATTGATTGAAGCCCACTTTA
TCTGCTGACATAATAATCTCTTTTATGTAATATTATCTGCTCATAAACAT
TAGCCATATAAAATATCTTCACAACAAATTTAATATTCAGTTAATTTTTT
TTAGCATGACCCCAGCCAGTTCTGAGGCTGAGGCAGGTTTAATTTTTCCT
AATCTGCTTTTATACCATCTTAATTACATGCAAGTATTAAGAAAATACAT
ACAATGAGGAACAAGCAAGACAATAAACACAAATAGTCAAGGAACAAGGA
AGAGAATGAACAAAGTCGCATAATCTCTCCTGTGACCACCGTTTCTAAGA
GCTTATCAGAATGATCAAGATATATGAGCCTACTTCCCTGTCCTAGCCCA
AAGTCATATTCATGCCTGAAGCCTACTTTTTTTGTTCCACCCTAAGATTA
AGATTCCTGCCTGAGCCCATTTCCTTGTCCTTAAACAATGTCAGATTCCT
GCCAAGCAGCTCTCAAAGGCTCTCCACATCTCCCCCATTTTTATTTCATA
AGCAAGACTGTGCCTGTCTTAAGGGTTCTGACAAGAATGCCTTCCTTACT
TGTCATTGAATATGCATTATCAAAAGCAATGCACTTCTGTN

Query= MSMg01no538_h09.b1 MSMg01no538_h09.b1 CHROMAT_FILE:
MSMg01no538_h09.b1 PHD_FILE: MSMg01no538_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:17:07 2005
         (605 letters)



>mm_chr15_44890498_44891503
          Length = 1006

 Score = 1027 bits (531), Expect = 0.0
 Identities = 558/567 (98%), Gaps = 1/567 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   acaaaatgacatttaaagcaaagtttcacactacagtacacataaaattggtaaaatgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 acaaaatgacatttaaagcaaagtttcacactacagtacacataaaattggtaaaatgtt 516

                                                                       
Query: 61  atgtcagatgttttaagg-aaagaaaaaatcatagtgtgtgccagacaaggttaagagtg 119
           ||||| |||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 515 atgtcggatgttttaaggaaaaaaaaaaatcatagtgtgtgccagacaaggttaagagtg 456

                                                                       
Query: 120 tcttgaaagatacctagaaagttctttgttgggagaagatgcttttaacttgggtttgga 179
           ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tcttgaaaggtgcctagaaagttctttgttgggagaagatgcttttaacttgggtttgga 396

                                                                       
Query: 180 gataccttgctggtaactaaaagaaagctaaagtttagggtctccacttcattttacatg 239
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gatgccttgctggtaactaaaagaaagctaaagtttagggtctccacttcattttacatg 336

                                                                       
Query: 240 tacctcctctgtcttgaaattgagggtcagattcctgctaaaccctgcttgtaagcaagt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tacctcctctgtcttgaaattgagggtcagattcctgctaaaccctgcttgtaagcaagt 276

                                                                       
Query: 300 caatcatttaagacatgcctgtctaaaacacatacacagcttattagttccaaatttact 359
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 caatcattcaagacatgcctgtctaaaacacatacacagcttattagttccaaatttact 216

                                                                       
Query: 360 actctaccccatctctgtagaggaatttttatctagcaacatggctactctggcaaggga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 actctaccccatctctgtagaggaatttttatctagcaacatggctactctggcaaggga 156

                                                                       
Query: 420 tcatatccaaatatattccaggtctgtgtgatgtggctgcaatgacacacctttaatcct 479
           ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 155 tcatatccaaatatattccagatctgtgtgatctggctgcaatgacacacctttaatcct 96

                                                                       
Query: 480 aaacaatgaggataaggttagtgtgcagaaagaagtagccatgtttgaaagtaacatcta 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  aaacaatgaggataaggttagtgtgcagaaagaagtagccatgtttgaaagtaacatcta 36

                                      
Query: 540 atttagtcatgaatctgagaaagattt 566
           |||||||||||||||||||||||||||
Sbjct: 35  atttagtcatgaatctgagaaagattt 9


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1006
Length adjustment: 10
Effective length of query: 595
Effective length of database: 996
Effective search space:   592620
Effective search space used:   592620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)