Query= MSMg01no539_h09.b1 MSMg01no539_h09.b1 CHROMAT_FILE:
MSMg01no539_h09.b1 PHD_FILE: MSMg01no539_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:25 2005
(537 letters)
>mm_chr15_38273449_38274386
Length = 938
Score = 988 bits (511), Expect = 0.0
Identities = 529/535 (98%), Gaps = 1/535 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctttctcaa-cacaagttgattgggaacaattccggatgactagttatgact 62
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctttcagaagcacaagttgattgggaacaattccggatgactagttatgact 263
Query: 63 tcaaggggaattcacagagttatacagttttggaagagaggccctgcttataaactgggt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tcaaggggaattcacagagttatacagttttggaagagaggccctgcttataaactgggt 323
Query: 123 catctcacagctctgcgtctaataatttaattagctccatacatagcgagaccttatcag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catctcacagctctgcgtctaataatttaattagctccatacatagcgagaccttatcag 383
Query: 183 tttcagcgcggcatggcaaattgatggttttgcaatcagcgtgtggaaggcttggcagtc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttcagcgcggcatggcaaattgatggttttgcaatcagcgtgtggaaggcttggcagtc 443
Query: 243 tttcctgtgaatagcagttgcctcctgtggcggtgccacagaggttgggtgtactccggg 302
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 tttcctgtgaatagcagttgcctcctgtggcggtgccatagaggttgggtgtactccggg 503
Query: 303 ctcccctggggttccccagcaaatcctcttagagtcactccacatacaccactctcctgt 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 504 ctcccctggggttccccagcaaatcctcttagagtcactccacatacaccactcacctgt 563
Query: 363 tttccacttgatctcaagtcagaaaattcttcatttcagccaagactagtatgtgtaatt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttccacttgatctcaagtcagaaaattcttcatttcagccaagactagtatgtgtaatt 623
Query: 423 gtgtacgtatgcatgtgtgttcatgtgcatagagctgtgcatgtgtgtgcctgtggatgc 482
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtgtacatatgcatgtgtgttcatgtgcatagagctgtgcatgtgtgtgcctgtggatgc 683
Query: 483 ctggaggacaaccaggcactgttctcagatactgtctgtccaccagtggccctga 537
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctggaggacaaccaggcactgttctcagatactgtctgtccaccagtggccctga 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 938
Length adjustment: 10
Effective length of query: 527
Effective length of database: 928
Effective search space: 489056
Effective search space used: 489056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_h09.g1 MSMg01no539_h09.g1 CHROMAT_FILE:
MSMg01no539_h09.g1 PHD_FILE: MSMg01no539_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:25 2005
(453 letters)
>mm_chr15_38462250_38463102
Length = 853
Score = 617 bits (319), Expect = 0.0
Identities = 358/371 (96%)
Strand = Plus / Minus
Query: 1 ctgttccagcagtcacagaagaaagatgtgagaaaggagcgtgtggaagcactgaatgct 60
|||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 371 ctgttccagcaggcacagaagaaagatgtgagaaaggagcgtgcagaagcaccgaatgct 312
Query: 61 gtcatcagtgaagagagaaggtggcttcatgggggctgcagggaatctgggaccttaagg 120
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 311 gtcatcagtgaagagagaaggtggcttcatgggggctgcagggaatcccggaccttaagg 252
Query: 121 acctgtggtgtcaagttgagcaccatggaaacagacctcctgcctgcatgtgtgtcagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 acctgtggtgtcaagttgagcaccatggaaacagacctcctgcctgcatgtgtgtcagat 192
Query: 181 cccctggaactggatctgctgccacctgggtgctgggaattaaacccgggtcctctggaa 240
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 191 cctctggaactggatctgctgccacctgggtgctgggaattaaaccctggtcctctggaa 132
Query: 241 gagcagtccgtgctttgaagtgctaaaccacctttccagcccctgaaaatagcatttaag 300
|||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 131 gagcagtctgtgctttgaagtgctgaaccatctttccagcccctgaaaatagcatttaag 72
Query: 301 gaagataagtgtgagacagtagaaggagagaactgactcctgcaagttgtcccttgtcgt 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 71 gaagataagtgtgagacagtagaaggagagaactgactcctgcaagatgtcccttgtcgt 12
Query: 361 tcctgttaaag 371
||||| |||||
Sbjct: 11 tcctgctaaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
