NTTTTTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCCTCCCCTGCCAGGAGAAGGTCAGCCACTTTTTTTCCACTTA
GGATTCCAATTTCTAGGACAGGCCCAAGCAGATTAGAGAGGCTTTCGGCT
TTACTCTACCTACAGATTCAAATGCCAGTCTCTCCTGGAATAGTCTCACA
GCACATGCAGAATAATGTCTAAGAATTTGTCCAGTGCATCTGAACATGAA
ATTAGCCATTAAACCTAATTGATTTCCCATTGAATTATAACACAATATAT
AATTAACAAGGCCTTATGGTTACTTTCTGTCAGTTCTAGAGTCAGATCCT
ACTTGCTTTAACAAACCTGTACCTCCAAGGTTTAGAACATGGCTTACAGA
GAAGCTGTTGTTATTAAATAAATGACCAATAACACTTAATCACAATCACA
AATTCATGAAAAAAATAATCAGTCATGAAGAATTGATTATACAGTGCACA
ATAGAAAATAACAATGAAGGAATGTTCTGTGACTACCTCTGGGGCATGAG
GAAAATCGCCTTCCAAGGCCTGAAGCCCACAAGTGTATCAGCTGCTAATC
TTGCTACTCTGACAAAATGCTTGACAAAGGCAAGTGGAAGGGTCACGCTG
ACTCATGGNTGGATGATACAGGCTTAGTCTCTTCCCCTGTAGCTGTGATA
AATACTCGGACAAAGCAATTTATGATGAAAAAGGAAGCTTNATTATTTAG
GATATAGGCAAN

ATTATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCATGA
ATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGATC
ATGTGGTTTTTGTCTTTGAGTTTGTTTATATAGTGGATTACATTGATGGA
TTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGGT
CAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAATT
TTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGATGTT
CTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTGG
CTTCATAAAATGAGTTGGGTAGAGTACTTTCTACTTCTATCTTGTGAAAA
AGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACTC
TGCACTAAACCCGTCTGGTCCTGGGCTTTTTTTGGCTGGGAGACTATTTA
TAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAACT
TGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCAT
TTCATCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGATC
TGATGGNGTTTTGGATTTCTTCAGGACCTGTTGTTATGTCTCCTTTTTCA
CCTCTGATTTTGTTAATAAGAATTTGC

Query= MSMg01no539_k19.b1 MSMg01no539_k19.b1 CHROMAT_FILE:
MSMg01no539_k19.b1 PHD_FILE: MSMg01no539_k19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:18:43 2005
         (564 letters)



>mm_chr15_26252389_26253352
          Length = 964

 Score = 1031 bits (533), Expect = 0.0
 Identities = 554/561 (98%), Gaps = 1/561 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccctcccctgccaggagaaggtcagccactttttttccacttaggattccaatt 63
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 ggaattccct-ccctgccaggagaaggtcagccactttttttccacttaggattccaatt 876

                                                                       
Query: 64  tctaggacaggcccaagcagattagagaggctttcggctttactctacctacagattcaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 tctaggacaggcccaagcagattagagaggctttcggctttactctacctacagattcaa 816

                                                                       
Query: 124 atgccagtctctcctggaatagtctcacagcacatgcagaataatgtctaagaatttgtc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 atgccagtctctcctggaatagtctcacagcacatgcagaataatgtctaagaatttgtc 756

                                                                       
Query: 184 cagtgcatctgaacatgaaattagccattaaacctaattgatttcccattgaattataac 243
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 cagggcatctgaacatgaaattagccattaaacctaattgatttcccattgaattataac 696

                                                                       
Query: 244 acaatatataattaacaaggccttatggttactttctgtcagttctagagtcagatccta 303
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 695 acaatatataattaacaaggccttatggttactttctgtcagttctagagtcggatccta 636

                                                                       
Query: 304 cttgctttaacaaacctgtacctccaaggtttagaacatggcttacagagaagctgttgt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cttgctttaacaaacctgtacctccaaggtttagaacatggcttacagagaagctgttgt 576

                                                                       
Query: 364 tattaaataaatgaccaataacacttaatcacaatcacaaattcatgaaaaaaataatca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tattaaataaatgaccaataacacttaatcacaatcacaaattcatgaaaaaaataatca 516

                                                                       
Query: 424 gtcatgaagaattgattatacagtgcacaatagaaaataacaatgaaggaatgttctgtg 483
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 515 gtcatgaagaattgattatacagtgcacaatagaaaataacaacaaaggaatgttctgtg 456

                                                                       
Query: 484 actacctctggggcatgaggaaaatcgccttccaaggcctgaagcccacaagtgtatcag 543
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 gctacctctggggcatgaggaaaatcgccttccaaggcctgaagcccacaagtgtatcag 396

                                
Query: 544 ctgctaatcttgctactctga 564
           ||||| |||||||||||||||
Sbjct: 395 ctgcttatcttgctactctga 375


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space:   528516
Effective search space used:   528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)