Query= MSMg01no540_e22.b1 MSMg01no540_e22.b1 CHROMAT_FILE:
MSMg01no540_e22.b1 PHD_FILE: MSMg01no540_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:32 2005
(639 letters)
>mm_chr15_13837237_13838275
Length = 1039
Score = 1062 bits (549), Expect = 0.0
Identities = 624/675 (92%), Gaps = 42/675 (6%)
Strand = Plus / Minus
Query: 7 gaattcttgcacttaaaacaccctggccattgtaaaataaattaataaaaggtaaattaa 66
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 gaatgcttgcacttaaaacaccctggccattgtaaaataaattaataaaaggtaaattaa 905
Query: 67 agttaaacgtaaggaggggtaaaaaaggtgaagggaagaaagagaatggaatgtatgctg 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 904 agttaaacgtaaggaggggtaaaaaaggtgaagggaagaaagagaatagaatgtatgctg 845
Query: 127 tggaaaaggacagaaggcatgaaaggaggaaagaaggaaagagggggaagagaagatgag 186
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tggaaggggacagaaggcatgaaaggaggaaagaaggaaagagggggaagagaagatgag 785
Query: 187 atagaaggatggaaggaaggaaacacattccaataaaacatgagcaaaaatagagacttc 246
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 atagaaggatagaaggaaggaaacacattccaataaaacatgagcaaaaatagagacttc 725
Query: 247 agtgtaacatttgccattctcagcacaaagatgtaggcttttccataagggaagagtaga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 agtgtaacatttgccattctcagcacaaagatgtaggcttttccataagggaagagtaga 665
Query: 307 agagagggaggtgtggccaaagcagagtttagccaaaaatgacctttgttgtttatttgc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 agagagggaggtgtggccaaagcagagtttagccaaaaatgacctttgttgtttatttgc 605
Query: 367 tttcaaaactcccatcagcgactagcagttctttcttttaagaagagctgtgtggattat 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tttcaaaactcccatcagcgactagcagttctttcttttaagaagagctgtgtggattat 545
Query: 427 caatagaatcaagtaatggaacataatgtatccagttaggacagatatgctattgtgata 486
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 544 caatagaatcaagtaatggaacataatgtatccagttaggacaaatatgctattgtgata 485
Query: 487 tgatatgtgaataagtcttagaaacatcttattagcatatacagactggcatcatactaa 546
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 484 tgatatgtgaataagtcttagaaacatcttattagcatatacagattggcatcatactaa 425
Query: 547 tagttatgcatgttca--g--------tg------------------------------- 565
|| |||||||| |||| | ||
Sbjct: 424 taattatgcatcttcaaagcgggaaaatgcaaatccagaaaggctaagactgggtatgta 365
Query: 566 -acctaagtcactgggaagtgtttgggggtttcttgggtcataatgatattcaacttatt 624
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cacctaagtcactgggaagtgtttgggggtttcttgggtcataatgatattcaacttatt 305
Query: 625 ggctggctgcccaaa 639
|||||||||||||||
Sbjct: 304 ggctggctgcccaaa 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no540_e22.g1 MSMg01no540_e22.g1 CHROMAT_FILE:
MSMg01no540_e22.g1 PHD_FILE: MSMg01no540_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:32 2005
(615 letters)
>mm_chr15_13689460_13690475
Length = 1016
Score = 1114 bits (576), Expect = 0.0
Identities = 606/616 (98%), Gaps = 1/616 (0%)
Strand = Plus / Plus
Query: 1 tgtgtagaaaagtctaaggtttccttgaaaggtatgaaaataacagtttgatgctggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgtagaaaagtctaaggtttccttgaaaggtatgaaaataacagtttgatgctggagg 260
Query: 61 aatttaaatattctagagcagagaaaatcaccccacagctatgtcctttgtaaggcttta 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatttaaatagtctagagcagagaaaatcaccccacagctatgtcctttgtaaggcttta 320
Query: 121 aattctaaacttctgattatgtaaggcagttcacagaatgctgactcagaggtagatttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattctaaacttctgattatgtaaggcagttcacagaatgctgactcagaggtagatttc 380
Query: 181 agttttgacatagttattaaaacaggaaaagtattgacatttgttcttaattgccagcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttttgacatagttattaaaacaggaaaagtattgacatttgttcttaattgccagcta 440
Query: 241 taactttccttttaattatgttagcacatgtgtggattcaattataatttcaaatgtttc 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 taactttccttttaattatgttagcacatgtgtggattcaattatactttcaaatgtttc 500
Query: 301 caaccactccaagaggcattgtgttctcgatataaaaagacaggagtatgtaattttcat 360
||||||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||
Sbjct: 501 caaccactccaagaggcattgtgttttcgacataataggacaggagtatgtaattttcat 560
Query: 361 gatcaaagagaagaagtatgaggaaaatatttaacactaatgacattttgaaaaactctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatcaaagagaagaagtatgaggaaaatatttaacactaatgacattttgaaaaactctc 620
Query: 421 gtggggaccggttactgcagaagcttattaaaatatgtacatacagaactctttaaatgg 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtggggactggttactgcagaagcttattaaaatatgtacatacagaactctttaaatgg 680
Query: 481 agctaacaataatgagaacgtcacttcttaagccattggctgcaaagaaccatgggacta 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 681 agctaacaataatgagaacgtcacttcttaagccattggctgcaaagaaccacgggacta 740
Query: 541 cataacctatacagaacaatatggtttgtagtttt-gaagttgaaaagtccttaggacaa 599
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 741 cataacctatacagaacaatatggtttgtagttttagaagttgaaaagtccttaggacaa 800
Query: 600 acattttgaaacagga 615
| ||||||||||||||
Sbjct: 801 atattttgaaacagga 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1016
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1006
Effective search space: 608630
Effective search space used: 608630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
