Query= MSMg01no542_a03.b1 MSMg01no542_a03.b1 CHROMAT_FILE:
MSMg01no542_a03.b1 PHD_FILE: MSMg01no542_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:53 2005
(650 letters)
>mm_chr15_99757687_99758736
Length = 1050
Score = 1218 bits (630), Expect = 0.0
Identities = 642/646 (99%)
Strand = Plus / Plus
Query: 5 gaattctaagccgacctctctcgaatgattatgctcttagtataactgctagtttaatgt 64
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaagccgacctctctcgaatggttatgctcttagtataactgctagtttaatgt 264
Query: 65 taggtgatgatatttgcaggtctaggaagagaacactgaccacctgagttcatctgcact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taggtgatgatatttgcaggtctaggaagagaacactgaccacctgagttcatctgcact 324
Query: 125 atgttgtaaatctaaacaccccctttgcttattcctctgtaatgcaggagaaagtcaaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgttgtaaatctaaacaccccctttgcttattcctctgtaatgcaggagaaagtcaaat 384
Query: 185 taggaagacagaagatgagactaacgaccccgtgaccagagtacccaaacctttactcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taggaagacagaagatgagactaacgaccccgtgaccagagtacccaaacctttactcac 444
Query: 245 tgtgaccggatggaagcaagagattttctgaaggtcgactgaatgtctaactgcagcagc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtgaccggatggaagcaagagattttctgaaggtcgactgaatgtctaactgcagcagc 504
Query: 305 ttgggaatatctgggtacccacccagctgggcccagagcgcactcatcggtgccttctct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgggaatatctgggtacccacccagctgggcccagagcgcactcatcggtgccttctct 564
Query: 365 attattgggtagcttgacgtagacaggtcagcgttccacacggcctccactgaagcttgt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attattgggtagcttgacgtagacaggtcagcgttccacacggcctccactgaagcttgt 624
Query: 425 ctatagagacagagagcgcacatcggcatgaagctctcagagctcactttggccaaaaca 484
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 625 ctatagagacagagagcgcacatcggcatgaagctctcagagctcacttcggtcaaaaca 684
Query: 485 cacaagcttcacacacctcctcaggtctgcactgtccttctgtgcccaagggagccctag 544
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 685 cacaagcttcacacacctcctcagatctgcactgtccttctgtgcccaagggagccctag 744
Query: 545 ctgtagccaccctggcagagatatgggaaaagcagaatttgctgatgtagttaccaaaac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctgtagccaccctggcagagatatgggaaaagcagaatttgctgatgtagttaccaaaac 804
Query: 605 acctctatggcctagtcatccattttcacaataccttcttagcctc 650
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 acctctatggcctagtcatccattttcacaataccttcttagcctc 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no542_a03.g1 MSMg01no542_a03.g1 CHROMAT_FILE:
MSMg01no542_a03.g1 PHD_FILE: MSMg01no542_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:21:53 2005
(581 letters)
>mm_chr15_99898842_99899821
Length = 980
Score = 919 bits (475), Expect = 0.0
Identities = 493/499 (98%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 83 aaggagggagagagggagactaagatagctccagtggaaacactgactcttccagaaaat 142
||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 980 aaggagggagagagggagaataagatagctccagtggaaacactggctcttccagaaaat 921
Query: 143 gcaggctcagttcccagcacccacatggtctctcagttccaggggatccagcatcttctg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 gcaggctcagttcccagcacccacatggtctctcagttccaggggatccagcatcttctg 861
Query: 203 tgttctatgagtaccagctacacacgtgctgcacatacctccatgaaggcaacacacgcc 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tgttctatgagtaccagctacacacgtgctgcacatacctccatgaaggcaacacacgcc 801
Query: 263 tacaaaaaaattaacaagaagaggctcctgcccaccaaattctctgacttcatggcacac 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tacaaaaaaattaacaagaagaggctcctgcccaccaaattctctgacttcatggcacac 741
Query: 323 atgtgccatgacatgcatgtgcaagcaggcacacagcacacacatgcacacaacccaaaa 382
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 740 atgtgccatgacatgcatgtgcaagcaggcacacagcacacacacgcacacaacccaaaa 681
Query: 383 ataaataaaataaatgtctaaaaaaaaagcctgccagagcactgtctcaggaaagacggt 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ataaataaaataaatgtctaaaaaaaaagcctgccagagcactgtctcaggaaagacggt 621
Query: 443 cactaggcaggccctgactgacagaacactctcgcacttcagcagggtagtctggggtct 502
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cactaggcagg-actgactgacagaacactctcgcacttcagcagggtagtctggggtct 562
Query: 503 gattctaccaagcctactcacttccctctgattaaactaatcccttcttgactccgttct 562
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gattctaccaaacctactcacttccctctgattaaactaatcccttcttgactccgttct 502
Query: 563 ccttctccaccctctttcc 581
|||||||||||||||||||
Sbjct: 501 ccttctccaccctctttcc 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space: 553870
Effective search space used: 553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
