Query= MSMg01no545_b07.b1 MSMg01no545_b07.b1 CHROMAT_FILE:
MSMg01no545_b07.b1 PHD_FILE: MSMg01no545_b07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:58 2005
(673 letters)
>mm_chr15_25580261_25581338
Length = 1078
Score = 1230 bits (636), Expect = 0.0
Identities = 663/674 (98%), Gaps = 5/674 (0%)
Strand = Plus / Plus
Query: 5 gaattcccagttagctgccggggacgaacttgctattgcttgtgtttgtgcctgcattct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccagttagctgccggggacgaacttgctattgcttgtgtttgtgcctgcattct 264
Query: 65 ttaaaattaaaatgtccttgttcggagtgtgttgtggatggagtgtggagtgtatattca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaaaattaaaatgtccttgttcggagtgtgttgtggatggagtgtggagtgtatattca 324
Query: 125 tatgaggaagtgaacatacacaggtcagccctgagttccttcctccattgcttctataca 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgaggaagagaacatacacaggtcagccctgagttccttcctccattgcttctataca 384
Query: 185 ttctttcttca-tccccc----cccccccacccagcacccctgcaccctccccctttttt 239
||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||||
Sbjct: 385 ttctttcttcattcccccccaacccccccccccagcacccctgcacccttcccctttttt 444
Query: 240 taggcagggcttctcactgaccctggaggagacctactcctgtctgcctttctagaacta 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taggcaggacttctcactgaccctggaggagacctactcctgtctgcctttctagaacta 504
Query: 300 agatttcagacttcgtctccatgcctggcttttttccccctgggcactggggatctgaaa 359
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 505 agatttcagacttcgtctccatgcctggcttttatccccctgggcactggggatctgaaa 564
Query: 360 tcaggtccccatgcatgcacggctaacatttgccagcctgagcctcagtatatgtgcaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcaggtccccatgcatgcacggctaacatttgccagcctgagcctcagtatatgtgcaga 624
Query: 420 cagcagcagtagcaaaaaacccttaagcgtccttttgctctcccttcagatttctctatt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagcagcagtagcaaaaaacccttaagcgtccttttgctctcccttcagatttctctatt 684
Query: 480 tttacgttctagtgcatttacctgcttatgtagacatgaattacatgtgtaactcatgtt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttacgttctagtgcatttacctgcttatgtagacatgaattacatgtgtaactcatgtt 744
Query: 540 caccaaagcccgaaggcggtgtaggctcccttggaacggtatttccaggcagttctgagc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 caccaaagcccgaaggcggtgtaggctcccttggaacggtatttccaggcagttctgagc 804
Query: 600 cgccacgtgtgtagtgggaactgaatgctggggttctggaaaaccagcgggtgctcccaa 659
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 805 cgccacgtgtgtagtgggaactgaatgctgggcttctggaaaaccagcgggtgctcccaa 864
Query: 660 ccaactgcttgagc 673
||||||||||||||
Sbjct: 865 ccaactgcttgagc 878
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1078
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1068
Effective search space: 708084
Effective search space used: 708084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_b07.g1 MSMg01no545_b07.g1 CHROMAT_FILE:
MSMg01no545_b07.g1 PHD_FILE: MSMg01no545_b07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:58 2005
(660 letters)
>mm_chr15_25757771_25758826
Length = 1056
Score = 1125 bits (582), Expect = 0.0
Identities = 640/662 (96%), Gaps = 8/662 (1%)
Strand = Plus / Minus
Query: 1 ctcagggtgtgttaacattctaatacatattaagtgcaatgaaggagaacagcgggcagc 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 856 ctcagggtgtgttaacattctaatacgtattaagtgcaatgaaggagaacagcgggcagc 797
Query: 61 agatccggacagctcgttgaaagagaggtaggggtggtcagggaagtgatgttttgagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 agatccggacagctcgttgaaagagaggtaggggtggtcagggaagtgatgttttgagtc 737
Query: 121 gagagacggaaagcaacacagtcacgtgacattcaggaagccaggccatggcagacagag 180
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 736 gagagatggaaagcaacacagtcacgtgacattcaggaagccaggccatgtcagacagag 677
Query: 181 caaagggggagtgtgtgagtctcaaagcttagactgtcttgcaaataactactcaagaaa 240
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 caaaggggaagtgtgggagtctcaaagcttagactgtcttgcaaataactactcaagaaa 617
Query: 241 ccacaggaacatcgaagcagaagcagctgaacagagagggcaagggcaggaggcagagga 300
|||||||||||||| ||| |||||||||||||||| |||||||||||||| ||| |
Sbjct: 616 ccacaggaacatcg---cag---cagctgaacagagaggtcaagggcaggaggcggagaa 563
Query: 301 atgatagcaatgagcccacagagctagtggaagagaacactcacatggagagaacgctca 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 562 atgatagcaatgagcccacagagctagtggaagagaacgctcacatggagagaacgctca 503
Query: 361 catggcgaacaagcacttgtgaaacagtggtggcatgcttgccagtgttccattggcatg 420
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 502 catggcaaacaagcacttgtgaaacagtggtgacatgcttgccagtgttccattggcatg 443
Query: 421 acaaatccctgagaaggt-aactgcagggcgggcgggttagctatattttactcatagtt 479
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 442 acaaatccctgagaaggtcaactgcagggcgggcgggttagctatattttactcacagtt 383
Query: 480 tcgaaggtttcagtctgaagtcagttagaaccactgtttctgagccagcacagcatagtg 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 382 tcgaaggtttcagtctgaagtcagttagaaccactgtttctgagccagcacagcattgtg 323
Query: 540 agggtgtatactgcaaagctactcacctcgtggtggtcaagaaggaagagtagcagggag 599
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agggtgtatactgcaaagctgctcacctcgtggtggtcaagaaggaagagtagcagggag 263
Query: 600 ggccc-gttgcattgtgtatgtctttaagagcacactctactttcctccaactcaatccc 658
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggccccgttgcattgtgtatgtctttaagagcacactctactttcctccaactcaatccc 203
Query: 659 ac 660
||
Sbjct: 202 ac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1056
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1046
Effective search space: 679900
Effective search space used: 679900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
