XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCATGGCTTAATATACAAAAAAAGAAGTAAACTTAAAACCTTACTGAAAA
AGATGTGTGGATATGTATGTATGCATGTAAAACTTTTTAAAAACATGATA
AAGCACTGGGGCTATCTAATTAGGTAAATTTTCTATAGAATGATATTTAA
ATGTATAAGGATATAATATTGGGGTATAGGAAACAGTTCATTGTTTAAAG
GCCTCTCCAATCACGAGGAACTGAGTTTGTACCCCCAGCACCTGTAAAAG
CTGGGCTTGGCTGCATGTGCCTATAGCCTCACCGATAGAGGACAAAGGCA
GGCAGCCTGTTGTGGCATCTTGGTAGTCATCCAGTTACTAAATTAGTAAG
ACTCTGGTTTATCTGAGACCCTGCCTCAGTGCACAAAGTCTGAGAGCCAT
AGAGGAAGATATCTGATGTCTGGCTCAACAAGCATGTTCATGGCCATGTA
CCCCTACCTGTACTTATGCATGCATTAAAAAAGTTAAGTCTAGTTTTCCT
TTCAGATTTCTCAAGGGTTTTAATATAGAAAATCGTAAGCATTATTAATC
TAAAAATAACGAACAAGAAATTTGAACCCACCTTAAAGATTTTGGCCCTG
TATCAACTTACCCACATTTATGTTTGATCTTAGTTAATGTCAGAGAGAGA
ACTGTGTATAATAGTTAGGATCTGAGAAATAGGG

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCACCTGAGGAATAACGAATGGCTGAGAATCA
CCTGAAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAA
ACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAA
TTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCC
TTCATTGTTGGTGGGATTGCAAACTTGTACAACCACTCTGGAAATCAGTC
TGGTGGTTCCTCAAAAAATTGGACATAGTACTACGGGAGGATGCCGCAAT
ACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCAGTAAGAAGGACA
CATGTTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGG
AAAGAACCCAGATGCCCCTCAACAGAGGAATTGATACAAAAAATGTGGTA
CATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGA
AATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA
ACACAATCTCCAAAGAACTCATATAATATATACTCACTGATAACTGGATA
TTAGGCCAGAAACTTAGTATAGTGGGATATAATGTACAATTTTGTAAACA
CTTGATATTTGAATAATAACGAATACCAAAGTGGGGTCTT

Query= MSMg01no546_a07.b1 MSMg01no546_a07.b1 CHROMAT_FILE:
MSMg01no546_a07.b1 PHD_FILE: MSMg01no546_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:10 2005
         (514 letters)



>mm_chr15_41685421_41686333
          Length = 913

 Score =  971 bits (502), Expect = 0.0
 Identities = 508/510 (99%), Gaps = 1/510 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccatggcttaatatacaaaaaaagaagtaaacttaaaaccttactgaaaaagatg 64
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccatggcttaatatacaaaaaa-gaagtaaacttaaaaccttactgaaaaagatg 263

                                                                       
Query: 65  tgtggatatgtatgtatgcatgtaaaactttttaaaaacatgataaagcactggggctat 124
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 264 tgtggatatgtatgtatgcatgtaaaacttttaaaaaacatgataaagcactggggctat 323

                                                                       
Query: 125 ctaattaggtaaattttctatagaatgatatttaaatgtataaggatataatattggggt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctaattaggtaaattttctatagaatgatatttaaatgtataaggatataatattggggt 383

                                                                       
Query: 185 ataggaaacagttcattgtttaaaggcctctccaatcacgaggaactgagtttgtacccc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataggaaacagttcattgtttaaaggcctctccaatcacgaggaactgagtttgtacccc 443

                                                                       
Query: 245 cagcacctgtaaaagctgggcttggctgcatgtgcctatagcctcaccgatagaggacaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cagcacctgtaaaagctgggcttggctgcatgtgcctatagcctcaccgatagaggacaa 503

                                                                       
Query: 305 aggcaggcagcctgttgtggcatcttggtagtcatccagttactaaattagtaagactct 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggcaggcagcctgttgtggcatcttggtagtcatccagttactaaattagtaagactct 563

                                                                       
Query: 365 ggtttatctgagaccctgcctcagtgcacaaagtctgagagccatagaggaagatatctg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggtttatctgagaccctgcctcagtgcacaaagtctgagagccatagaggaagatatctg 623

                                                                       
Query: 425 atgtctggctcaacaagcatgttcatggccatgtacccctacctgtacttatgcatgcat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgtctggctcaacaagcatgttcatggccatgtacccctacctgtacttatgcatgcat 683

                                         
Query: 485 taaaaaagttaagtctagttttcctttcag 514
           ||||||||||||||||||||||||||||||
Sbjct: 684 taaaaaagttaagtctagttttcctttcag 713


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 913
Length adjustment: 10
Effective length of query: 504
Effective length of database: 903
Effective search space:   455112
Effective search space used:   455112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)