Query= MSMg01no547_d22.b1 MSMg01no547_d22.b1 CHROMAT_FILE:
MSMg01no547_d22.b1 PHD_FILE: MSMg01no547_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:49 2005
(624 letters)
>mm_chr15_20932319_20933342
Length = 1024
Score = 1174 bits (607), Expect = 0.0
Identities = 616/619 (99%)
Strand = Plus / Minus
Query: 6 gaattcacttaaaattcatttcagtaaggtagcatctgcataggtagaaagaacatattg 65
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 909 gaattcacttaaaattcatttcagtaaggtagcatctgcatagggagaaagaacatattg 850
Query: 66 gtaatttttattaattttataatatctagagttggtatacatccaaatgattttttttcc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 gtaatttttattaattttataatatctagagttggtatacatccaaatgattttttttcc 790
Query: 126 aaaattgtcattatcaaggataatgaataagggaaaggacaaagaaatttgcatagaaat 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 aaaattgtcattatcaaggataatgaataagggaaaggacaaagaaatttgcatagaaat 730
Query: 186 gttgtagtggttatctattctgatgtttctaaggatcccctaaaatacgcaagagcattt 245
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 729 gttgtagtggttatctattctgatgtttctaaggatcccctaaaatatgcaagagcattt 670
Query: 246 aaatgaaaggacttgtgcaaaaataaatattgacaaaatgataatagtatgatttcaagt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aaatgaaaggacttgtgcaaaaataaatattgacaaaatgataatagtatgatttcaagt 610
Query: 306 aaatgatatggtgataacttattaacaaaatagattttgttaagcatgcatgtcattaat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aaatgatatggtgataacttattaacaaaatagattttgttaagcatgcatgtcattaat 550
Query: 366 ctgtatgttttctacatgtgcattagggctaggaatctcctgagcaagccatatgactaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ctgtatgttttctacatgtgcattagggctaggaatctcctgagcaagccatatgactaa 490
Query: 426 gttctaagttctgacatggtggcttttcactagcaggctgcacttcttttcagtaacagg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gttctaagttctgacatggtggcttttcactagcaggctgcacttcttttcagtaacagg 430
Query: 486 taatgtgtttaatttgtgctctgtcaaacagtgctattttcctaccattatgataaatgt 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 taatgtgtttaatttgtgctctgtcaaacagtgctattttcctaccattatgataaatgt 370
Query: 546 ctaaagccaaaaagctgaagatatattttccagaatcatttctcattagtaatcccttct 605
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 369 ctaaagccaaaaagctgaagatatattttccagaatcatttatcattagtaatcccttct 310
Query: 606 aattgatgaagctggaagt 624
|||||||||||||||||||
Sbjct: 309 aattgatgaagctggaagt 291
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_d22.g1 MSMg01no547_d22.g1 CHROMAT_FILE:
MSMg01no547_d22.g1 PHD_FILE: MSMg01no547_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:49 2005
(608 letters)
>mm_chr15_20714404_20715410
Length = 1007
Score = 1152 bits (596), Expect = 0.0
Identities = 605/608 (99%), Gaps = 1/608 (0%)
Strand = Plus / Plus
Query: 1 ttctgatgattaagcaaagtagcatgtttaaagtgaagagctgaatgcttgctgcacttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctgatgattaagcaaagtagcatgtttaaagtgaagagctgaatgcttgctgcacttc 260
Query: 61 ttgaaaagctttaatgtttttaaaatttaatttaaaagtgttgtctgatcatgatgcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 ttgaaaagctttaatgtttttaaaatttaatttaaaagtgttgtctgatcatggtgcata 320
Query: 121 ggtttcttcatatgcaaatatataattgctttgagcaatctgctatcatgtttattctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtttcttcatatgcaaatatataattgctttgagcaatctgctatcatgtttattctta 380
Query: 181 cctccctattcattgttttgtgatgcttccctgctccacagtttccattctactcttaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctccctattcattgttttgtgatgcttccctgctccacagtttccattctactcttaca 440
Query: 241 aaatctgtaaatacatgattttatatatcagttgcccatcaatggatgaatgaataaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatctgtaaatacatgattttatatatcagttgcccatcaatggatgaatgaataaaga 500
Query: 301 aactttggtatagttacaaaattaaacctttttagtcaaaaggaacaatgaatttatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aactttggtatagttacaaaattaaacctttttagtcaaaaggaacaatgaatttatgga 560
Query: 361 gcttctcattctcttaaggttttctgattcctggcagaaggtatttcaatatttctagcc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttctcattctcttaaggttttctgattcctggcagaaggtatttcaatatttctagcc 620
Query: 421 tttgacattatttgtctttgggaattttaagtttttttttttcagactaaataattgcaa 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 tttgacattatttgtctttgggaattttaagtttttttttt-cagactaaataattgcaa 679
Query: 481 tcactcaatgttggtctatctctgtgcttatgtttttcttttaattattttatttacatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcactcaatgttggtctatctctgtgcttatgtttttcttttaattattttatttacatt 739
Query: 541 ccagttgttgctcccctatgtctcctcttctgaatttcctcatcccattcctcctactcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ccagttgttgctcccctatgtctcctcttctgaatttcctcatcccattcctcctactcc 799
Query: 601 ttgcctcc 608
||||||||
Sbjct: 800 ttgcctcc 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1007
Length adjustment: 10
Effective length of query: 598
Effective length of database: 997
Effective search space: 596206
Effective search space used: 596206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
