Query= MSMg01no548_j16.b1 MSMg01no548_j16.b1 CHROMAT_FILE:
MSMg01no548_j16.b1 PHD_FILE: MSMg01no548_j16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:33 2005
(350 letters)
>mm_chr15_91339012_91339761
Length = 750
Score = 617 bits (319), Expect = 0.0
Identities = 340/347 (97%), Gaps = 2/347 (0%)
Strand = Plus / Minus
Query: 5 gaattcaatcctgcctccacctctgaacctctggaattacagatttgtg-cccaatgcct 63
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 550 gaattcaatcctgcctccacctctgaacctctggaattacagatttgtgccccaatgcct 491
Query: 64 gactttcctgtgaaaacagcccccgttgaaataagtctcctgacacttgtctttttaaaa 123
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 490 gactttcccgtgaaaacagcccccgttgaaataagtctcctgacacttgtcttttt-aaa 432
Query: 124 gagctcctgtccttgtgaaattaaataaccctgctttgttcaaaatgtctgatgcgtagg 183
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 431 gagctcctgtccttgtgaaattaaataaccttgctttgttcaaaatgtctgatgcgtagg 372
Query: 184 ctctaagaggcaaggggtacttgttcatgactgcatccctgtaatctccagcttaaacct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 371 ctctaagaggcaaggggtacttgttcatgactgcatccctgtaatctccagcttaaaact 312
Query: 244 ttgcatggaagactctccgagaatctaggggtcatagtcaaacaacgtctctgtctctgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttgcatggaagactctccgagaatctaggggtcatagtcaaacaacgtctctgtctctgt 252
Query: 304 gtgtctctgcttctctctctcacctacacacacacacctgagtgagt 350
||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 251 gtgtctctgtttctctctctcacctacacacacatacctgagtgagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_j16.g1 MSMg01no548_j16.g1 CHROMAT_FILE:
MSMg01no548_j16.g1 PHD_FILE: MSMg01no548_j16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:34 2005
(580 letters)
>mm_chr15_91200817_91201795
Length = 979
Score = 1046 bits (541), Expect = 0.0
Identities = 571/581 (98%), Gaps = 3/581 (0%)
Strand = Plus / Plus
Query: 1 tgagatcagtgtctcacaaactgcatcatatttcccacgaagtggcatatacaaggttgg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tgagatcagtgtctcacaaactgcatcatatttcccacgaagtggcatatacgaggttgg 260
Query: 61 ttttatatgtgtccgtagaacaggctatttcagaagacatttgttcacaaaaggctcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttatatgtgtccgtagaacaggctatttcagaagacatttgttcacaaaaggctcatt 320
Query: 121 tcctttcttcaaagtgaacagagctaaattatcatatctgaaaaatgcgtaataagggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctttcttcaaagtgaacagagctaaattatcatatctgaaaaatgcgtaataagggaa 380
Query: 181 agagacagcagtaaaaggccacaggaataacttcagtccaattagcaaattagggggggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 agagacagcagtaaaaggccacaggaataacttcagtccaattagcaaatt-gggggggg 439
Query: 241 ggaa-taaggtaaaaaatctaagttgatctgatcagaatagtctcgattactcatggaaa 299
|||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ggaaataaggtcaaaaatctaagttgatctgatcagaatagtctcgattactcatggaaa 499
Query: 300 attctgcaaggttttatgaactggatcacattaattttttataggatttaataaaagtac 359
| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 500 actctgcaagattttatgaactggatcacgttaattttttataggatttaataaaagtac 559
Query: 360 aaaaaaagatttcagaagcaaactttaaaaatctgcctcttttttgtttgtttgtgtgtt 419
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 560 aaaaaaagatttcagaagcaaactttaaaa-tctgcctcttttttgtttgtttgtgtgtt 618
Query: 420 tgtttgcttgttatttttcaagacagggtttctctgtgtagctctgactgtcccggaact 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgtttgcttgttatttttcaagacagggtttctctgtgtagctctgactgtcccggaact 678
Query: 480 cactctgttgaccaggctggccttgaactcagaaatctgcctgcctctgcctcccaagtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 679 cactctgttgaccaggctggccttgaactcagaaatctgcctgcctctgcctcccgagtg 738
Query: 540 ctgggattaaaggcgtgtgccaccactgcccgactcaaaat 580
||||||||||||||||| |||||||||||||||||||||||
Sbjct: 739 ctgggattaaaggcgtgcgccaccactgcccgactcaaaat 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 979
Length adjustment: 10
Effective length of query: 570
Effective length of database: 969
Effective search space: 552330
Effective search space used: 552330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
