MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-001A05
Chromosome	16 (Build37)
Map Location	85,340,950 - 85,341,535
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC665664, LOC547311, LOC100039893, LOC100039634, Mrpl39, Jam2, Atp5j, LOC100039950, Gabpa, Gm311, App
Downstream gene	Cyyr1, LOC100039994, LOC622000, Adamts1, Adamts5, LOC100040025, LOC100039780
Link	Open Mouse BAC browser

no map image available.

Click to get alignment info.

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-001A05.b	B6Ng01-001A05.g
ACC	DH839452	DH839453
length	1,212	586
definition	DH839452\|Mus musculus domesticus DNA, BAC clone: B6Ng01-001A05, 5' end.	DH839453\|Mus musculus domesticus DNA, BAC clone: B6Ng01-001A05, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagttctgagccccattttttaatggggttatttgatt ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc ctatctgatttaggataggtaaagatcctttcctaatctgttggtggtct ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc tctgtaggtcaggcatggtgattccaccagaggttcttttatccttgaga agagtttttgctatcctaggttttttgttattccagatgaatttgcaaat tgctccttctaattcgttgaagaattgagttggaattttgatggggattg cattgaatctgtagattgcttttggcaagatagccctttttacaatgttg atcctgccgatccatgagcatgggagatctttccatcttctgagatcttc tttaatttctttcttctgagacttgaagtttttatcatacagatctttca ctccttagtaagagaaacgccgagatatttataataatttgtgactaatg ggaggggttgcttccctaatttctatctagccagtttattcttgtgtgaa gaaagagcatgacttgttgagtaatttttatatcagcaacttcaccgaac gatatcagttgtggatttctccgggaggattttctgtcccttaactcact actatatactggaaagagagtatttgaattcccttctccaccttgatcca ccatgacgtccttggtatggaattgctctgcataccttaaggaatcaagt gtggcgacaaat	gaattctttttctgtcacagacgtagatctactcaccgtagtacattgaa atacaagaaattacaatggaaattgtgacatcaatctttgaaagagctcg ctccattaatacacacctccctggttcctttcttgctgtaatttgaatac tgtgattgtttgttttgttttaaatgtcagcttgccacaacttggaatca cctgagaacaaacatggcattgtctagatcaggttgggccaatggcatat ctgtgggggatagtctcaatgtagaaattgatgaaggaaaacccagtgca ctatgggtagcattgtggttaggctgagccctgaatttttgtaagcatgg gggttggggtgtagatgaagcagcaagcaggccacatgggtgccttcatt tttctctgattttgatggtgggtatgacaaactgtttatacttctgccta gactatcactcactgatgaactgtatcctgcgaatgtaagccaaataaaa cctttcctcaccaaaaatgctttggccagggcattttatcatagctacag aactgaagtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality values	Open. Hide. 37 29 24 20 61 61 47 52 43 37 37 43 31 24 31 43 43 43 38 37 55 36 41 52 49 43 32 43 49 43 41 43 49 43 35 41 59 52 59 59 52 45 49 49 45 45 52 43 36 52 45 43 45 45 43 59 43 32 43 45 38 39 52 59 49 49 52 49 45 52 52 43 43 36 45 30 36 30 43 45 52 59 52 49 43 37 37 44 38 59 49 49 52 49 49 36 45 59 52 52 43 38 45 45 49 45 52 59 49 49 59 44 44 59 59 39 39 36 52 37 43 49 43 39 59 45 43 44 36 44 52 43 43 39 43 43 39 41 45 52 39 41 55 59 49 59 59 45 39 30 38 28 31 31 39 27 39 29 24 44 36 39 43 49 38 26 41 23 36 36 36 36 36 41 43 43 39 41 37 37 38 39 36 18 43 36 52 52 59 44 44 31 21 32 24 37 41 43 45 38 59 59 52 34 59 45 39 36 37 36 52 52 45 45 39 39 31 36 49 49 36 39 36 29 45 45 39 36 38 52 59 45 41 49 52 52 59 49 45 43 52 43 43 41 52 36 39 52 43 45 43 49 59 43 49 41 43 34 52 59 49 52 59 49 43 41 39 39 43 39 52 59 45 45 43 39 45 43 59 39 45 33 36 30 35 31 39 39 59 29 45 52 59 59 45 45 45 45 39 39 59 49 45 49 43 49 45 45 45 30 36 36 36 36 23 45 45 36 43 33 28 36 52 34 43 36 43 45 59 59 45 45 45 43 45 41 49 43 59 59 59 49 36 45 45 45 43 41 43 52 52 49 59 49 59 59 41 41 31 52 43 36 36 38 52 52 52 41 39 41 35 30 52 43 49 49 49 52 52 36 59 43 34 43 24 29 31 43 43 43 43 37 37 30 52 43 43 49 24 41 49 52 49 52 49 52 49 43 43 52 43 52 52 52 43 49 52 52 49 52 52 52 49 43 43 43 49 36 49 43 43 31 52 52 49 37 37 26 37 41 41 52 37 41 37 39 37 52 52 52 52 52 41 43 32 41 43 41 43 52 37 43 43 39 36 41 38 55 49 55 50 55 61 38 49 37 41 43 32 49 49 50 50 50 37 43 50 37 37 19 49 43 19 47 43 43 49 34 37 37 50 47 49 49 37 37 29 22 43 31 50 43 50 43 55 55 47 47 49 55 49 50 43 34 37 28 37 43 32 31 49 35 29 35 27 43 35 43 43 21 23 24 23 24 16 14 31 43 50 36 35 50 43 50 45 36 43 39 31 45 35 50 50 35 35 39 28 35 38 33 53 31 37 32 42 40 52 47 23 50 50 50 24 34 21 31 28 27 27 38 47 32 20 52 31 33 28 32 45 31 34 39 34 43 27 34 27 30 24 20 22 24 40 32 36 39 43 31 24 39 43 38 33 39 45 32 47 52 28 28 33 14 39 31 30 45 33 34 32 30 30 38 33 27 42 27 47 47 30 50 38 24 47 30 34 30 38 33 27 32 43 32 22 32 47 33 42 45 23 34 28 28 30 36 30 32 38 27 31 33 17 28 30 31 24 12 50 27 30 38 30 24 21 14 21 20 20 38 38 32 47 52 50 30 39 34 23 34 37 17 28 19 17 26 28 21 24 33 31 28 45 30 52 16 32 36 39 37 22 45 38 38 38 50 33 24 50 30 35 32 31 27 30 30 17 19 32 15 20 26 17 14 16 24 30 24 28 20 23 19 29 28 31 20 34 18 20 33 30 25 29 17 17 27 23 19 32 35 17 34 15 38 11 10 20 11 10 19 14 24 36 31 33 23 29 24 31 17 20 28 35 28 33 24 33 47 28 22 5 52 36 33 22 28 24 29 30 10 27 24 27 35 30 6 47 27 25 16 29 18 30 28 23 24 27 22 47 12 27 38 24 25 30 25 23 17 27 18 27 32 14 17 12 26 23 24 28 26 22 10 13 17 19 13 17 12 5 8 29 14 30 10 17 13 23 19 27 31 48 31 27 16 22 10 27 12 11 10 10 12 8 8 29 23 15 33 35 28 27 14 10 14 9 13 11 15 29 16 19 26 24 11 29 12 6 5 9 12 28 17 24 11 29 19 7 5 14 12 7 27 21 15 25 8 13 18 17 16 29 8 14 11 27 26 24 18 12 14 16 12 5 4 19 19 18 11 16 8 12 29 6 13 10 13 30 18 8 21 12 12 10 10 15 10 17 28 18 18 10 7 18 35 14 20 8 24 6 19 13 11 9 12 17 6 5 16 14 9 8 8 6 20 35 26 12 7 7 36 8 15 17 14 6 6 10 10 12 10 6 7 5 15 9 18 8 28 33 32 11 10 7 6 4 4 5 8 6 5 5 21 10 12 8 17 25 20 16 7 8 6 3 4 18 7 6 14 6 6 8 12 6 12 9 13 10 5 9 11 7 8 6 8 22 20 18 9 14 9 22 22 29 20 27 8 4 3 2 4 8 21 6 8 6 11 10 12 6 7 13 19 6 10 16 7 10 4 4 4 7 6 5 7 4 18 9 9 13 5 4 4 6 5 24 27 25 14 8 5 9 6 7 14 8 9 4 4 20 9 15 11 4 4 11 4 7 6 9 6 12 6 11 5 2 6 3 7 9 6 3 5 4 3 7 4 2 3 3 3 1 3 3 15 8 6 5 1 2 3 4 3 3 2 5 5 6 12 4 5 10 7 5 8 4 1 3 1 2 3 4 6 3 6 3 3 3 6 7 3 9 13 19 3	Open. Hide. 55 47 52 49 61 61 33 28 33 25 22 27 20 23 25 32 24 59 43 36 59 59 49 52 52 32 59 59 52 59 52 59 59 59 59 59 59 59 49 59 39 59 52 59 52 59 59 59 59 59 52 59 59 59 52 49 36 59 52 59 59 59 52 59 59 43 44 59 36 37 49 59 59 59 61 59 59 59 59 52 59 59 43 52 59 59 52 52 52 52 59 59 59 59 61 59 59 59 59 49 59 59 59 59 52 59 59 52 52 59 59 59 52 61 59 61 59 59 59 59 59 59 59 59 52 59 59 59 59 59 59 52 52 52 59 59 61 49 45 43 45 59 59 59 52 59 59 59 61 61 55 59 49 52 59 59 59 59 59 59 59 59 59 52 52 59 59 59 59 59 59 52 59 59 59 59 59 59 52 39 59 59 59 59 59 59 49 49 39 38 49 52 41 49 33 61 59 59 59 52 59 59 59 59 61 45 61 59 59 59 59 59 59 52 59 59 59 39 52 59 59 59 59 59 59 59 43 59 59 52 52 43 59 52 52 59 59 59 59 59 52 59 59 61 59 52 52 59 52 59 59 59 59 52 59 59 59 59 59 59 59 43 30 33 36 36 43 52 52 59 61 52 52 39 59 59 59 59 59 59 59 59 59 61 59 49 61 61 59 59 59 59 49 49 39 27 39 52 59 52 59 59 59 59 45 49 44 44 45 43 59 52 59 59 59 52 59 59 52 52 52 52 59 52 59 59 61 49 59 59 59 59 59 59 59 59 59 59 59 59 59 59 49 59 45 59 52 59 55 59 59 59 59 59 59 59 61 59 59 59 61 39 45 31 52 39 45 59 52 34 45 52 39 49 39 34 39 39 41 28 52 52 59 49 34 23 30 41 36 44 39 52 43 45 41 36 36 27 43 45 45 43 43 49 39 49 39 43 49 39 43 33 43 49 59 49 52 49 36 52 43 45 27 39 45 35 59 52 36 41 52 49 59 59 49 45 49 45 45 43 43 39 36 43 43 52 41 43 37 43 28 49 45 49 49 49 52 23 37 31 27 19 23 31 52 49 49 43 59 59 49 52 59 43 43 49 43 43 43 52 33 14 41 43 36 43 24 26 36 24 43 38 43 36 35 36 36 52 41 37 37 39 39 37 37 41 41 43 43 36 37 36 39 29 37 36 49 43 49 43 43 37 24 32 32 23 27 24 19 19 34 26 43 41 55 50 43 43 32 37 22 26 38 19 37 49 34 49 23 31 50 49 37 43 26 31 16 14 31 33 35 34 31 31 23 35 35 33 42 50 50 50 50 39 39 24 23 24 21 21 20 24 28 35 21 17

Alignment Information

BAC End 1	BAC End 2
	seq1: chr16_85340950_85341535 seq2: B6Ng01-001A05.g_68_653 (reverse) seq1 CACACACACACACACACACACACACACACTTCAGTTCTGTAGCTATGATA 50 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CACACACACACACACACACACACACACACTTCAGTTCTGTAGCTATGATA 50 seq1 AAATGCCCTGGCCAAAGCATTTTTGGTGAGGAAAGGTTTTATTTGGCTTA 100 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AAATGCCCTGGCCAAAGCATTTTTGGTGAGGAAAGGTTTTATTTGGCTTA 100 seq1 CATTCGCAGGATACAGTTCATCAGTGAGTGATAGTCTAGGCAGAAGTATA 150 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CATTCGCAGGATACAGTTCATCAGTGAGTGATAGTCTAGGCAGAAGTATA 150 seq1 AACAGTTTGTCATACCCACCATCAAAATCAGAGAAAAATGAAGGCACCCA 200 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 AACAGTTTGTCATACCCACCATCAAAATCAGAGAAAAATGAAGGCACCCA 200 seq1 TGTGGCCTGCTTGCTGCTTCATCTACACCCCAACCCCCATGCTTACAAAA 250 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 TGTGGCCTGCTTGCTGCTTCATCTACACCCCAACCCCCATGCTTACAAAA 250 seq1 ATTCAGGGCTCAGCCTAACCACAATGCTACCCATAGTGCACTGGGTTTTC 300 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 ATTCAGGGCTCAGCCTAACCACAATGCTACCCATAGTGCACTGGGTTTTC 300 seq1 CTTCATCAATTTCTACATTGAGACTATCCCCCACAGATATGCCATTGGCC 350 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CTTCATCAATTTCTACATTGAGACTATCCCCCACAGATATGCCATTGGCC 350 seq1 CAACCTGATCTAGACAATGCCATGTTTGTTCTCAGGTGATTCCAAGTTGT 400 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 CAACCTGATCTAGACAATGCCATGTTTGTTCTCAGGTGATTCCAAGTTGT 400 seq1 GGCAAGCTGACATTTAAAACAAAACAAACAATCACAGTATTCAAATTACA 450 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GGCAAGCTGACATTTAAAACAAAACAAACAATCACAGTATTCAAATTACA 450 seq1 GCAAGAAAGGAACCAGGGAGGTGTGTATTAATGGAGCGAGCTCTTTCAAA 500 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GCAAGAAAGGAACCAGGGAGGTGTGTATTAATGGAGCGAGCTCTTTCAAA 500 seq1 GATTGATGTCACAATTTCCATTGTAATTTCTTGTATTTCAATGTACTACG 550 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GATTGATGTCACAATTTCCATTGTAATTTCTTGTATTTCAATGTACTACG 550 seq1 GTGAGTAGATCTACGTCTGTGACAGAAAAAGAATTC 586 \|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\|\| seq2 GTGAGTAGATCTACGTCTGTGACAGAAAAAGAATTC 586

BAC End 1

BAC End 2

seq1: chr16_85340950_85341535
seq2: B6Ng01-001A05.g_68_653 (reverse)

seq1  CACACACACACACACACACACACACACACTTCAGTTCTGTAGCTATGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACTTCAGTTCTGTAGCTATGATA  50

seq1  AAATGCCCTGGCCAAAGCATTTTTGGTGAGGAAAGGTTTTATTTGGCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCCTGGCCAAAGCATTTTTGGTGAGGAAAGGTTTTATTTGGCTTA  100

seq1  CATTCGCAGGATACAGTTCATCAGTGAGTGATAGTCTAGGCAGAAGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGCAGGATACAGTTCATCAGTGAGTGATAGTCTAGGCAGAAGTATA  150

seq1  AACAGTTTGTCATACCCACCATCAAAATCAGAGAAAAATGAAGGCACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTGTCATACCCACCATCAAAATCAGAGAAAAATGAAGGCACCCA  200

seq1  TGTGGCCTGCTTGCTGCTTCATCTACACCCCAACCCCCATGCTTACAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCTGCTTGCTGCTTCATCTACACCCCAACCCCCATGCTTACAAAA  250

seq1  ATTCAGGGCTCAGCCTAACCACAATGCTACCCATAGTGCACTGGGTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGGCTCAGCCTAACCACAATGCTACCCATAGTGCACTGGGTTTTC  300

seq1  CTTCATCAATTTCTACATTGAGACTATCCCCCACAGATATGCCATTGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATCAATTTCTACATTGAGACTATCCCCCACAGATATGCCATTGGCC  350

seq1  CAACCTGATCTAGACAATGCCATGTTTGTTCTCAGGTGATTCCAAGTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTGATCTAGACAATGCCATGTTTGTTCTCAGGTGATTCCAAGTTGT  400

seq1  GGCAAGCTGACATTTAAAACAAAACAAACAATCACAGTATTCAAATTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCTGACATTTAAAACAAAACAAACAATCACAGTATTCAAATTACA  450

seq1  GCAAGAAAGGAACCAGGGAGGTGTGTATTAATGGAGCGAGCTCTTTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAAGGAACCAGGGAGGTGTGTATTAATGGAGCGAGCTCTTTCAAA  500

seq1  GATTGATGTCACAATTTCCATTGTAATTTCTTGTATTTCAATGTACTACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGATGTCACAATTTCCATTGTAATTTCTTGTATTTCAATGTACTACG  550

seq1  GTGAGTAGATCTACGTCTGTGACAGAAAAAGAATTC  586
      ||||||||||||||||||||||||||||||||||||
seq2  GTGAGTAGATCTACGTCTGTGACAGAAAAAGAATTC  586

BAC Information

Search Parameter

Search Result

BAC

no map image available.

BAC End Information

Alignment Information