BAC Information

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BAC

Clone NameB6Ng01-002K24
Chromosome16 (Build37)
Map Location 60,026,919 - 60,028,050
singlet/doubletsinglet
Overlap geneEpha6
Upstream geneOlfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6
Downstream geneLOC100043804, EG668168, LOC668170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002K24.bB6Ng01-002K24.g
ACCDH840638DH840639
length1,1721,129
definitionDH840638|Mus musculus domesticus DNA, BAC clone: B6Ng01-002K24, 5' end.DH840639|Mus musculus domesticus DNA, BAC clone: B6Ng01-002K24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgatgaataccaaatggctgagaagcatctaaagaaatg
ttcaacattcttagtcatcagggaaatgcaaatcaaaactaccctgagat
tccacctcacaccagtcacagtggctaagattaaaaacttaggtgacagc
agatcctggtgagggtgtggagaaagaggaacatttatccactgctggtg
taattgcaagctggtacaaccactctgaaaatctgtttggctgttcctca
gaaaattggacatagtactactggaggacccatctataccactcttgggt
atatacccagaagatgttccaatatgtaataaggacaaatgttccacaat
attcatagcatccatatttataatagatagaagctggaaagaacccagat
gtctgtcaacagaggaatggatacagaaaatatagttcatttatacaact
attaaaaacaacgacttaatgaaattcgcaggcaaatggatggaacttga
gaatatcatcctgagtgaggtgactcagtcacaaaggaacacacatagta
ggcactcactgataagtgaatatttgtccagaagctcagaatactcaaga
tacaattcacaaactacatgaaactcaagaagaaggaagaccaaagtgta
gataccttcttagaagggggaacaaaaatacccatatgaggatatataga
gataaagtgtggagcagagactgaaggaaaggccatcaaaagactgcccc
atctggtgatccataccatatacagacactcaacccagactctgttttgt
ggattccaacaagtgcttgatggcaagagcctgatatagctgtctcctga
gaggatctgccagtgcctgacaaatatggaggtggatgctttcagctaag
catcggactgagcacaaggtccccaatggaggagctagaaaagtactgaa
ggagctgaaggagttgcagccccacaggaggaacacatatgatcatcagt
acctctaagttccaggactaaccaccaacggaaatgtgcacatggaggga
tcatgctccagttgcaatgtagcaaagatggcttttagacatcaattcag
agctctgtctgaaaaggtgatgtccatgttagggatgccagacaaggcaa
tggaggatggattgtgttgtct
gaattcatagttagaaaacataagtgttagctaacatggctttgctgtaa
gcagcgcctaactgtaggatttttaataaatgattaaataaaaataataa
ttttatttaatttaaaaataaattattttatttaaaaataataacttatt
tccaagttcttattactagaagatatttctagtttgaattttatagagaa
gagttaaataattctctgtatgagcatattcatattaagaaaacaaaatt
cattacttaaaagatataaagcgtaaatgaacctctattcataaagcacc
tatatgtaatgctgtttaaaacctagttgtcctaatggtttcaaaagtgt
ccttccttagtgctcctgcaagggagtctgagctaacagcctgttattat
gcactccttcctgagctgttaatagctttacagccttgcaaagaatacac
ctgctgctcataaaaacatttatgttggtaaagaatttggctgcatttta
atatcgtgtatttgcagtgaccttgtagaatgcatgctgttctgaaattt
tatgggaaagaaaaactaaaataagacggctatccatttatatgaacata
tcagtacaaaattagaaaatcatttggttattgtaaaggttctaatattt
taaaaggtttttttttaatcaatagtgttaaccaacttggtagctacctt
acattatttgagttcatttagagttttatacttaaatttttgttgcctta
tttacctatctaaaaaattaattttcctatagatttatcttggtaagaac
agaatgacttaaatcctatcagaaattccaatgtttccttgaggaaaaaa
aataagagttataattaattcggatctttcttacttaactaatagtaact
caaaggaatatagttagaaaaatataaaattttagctaaagagcattctg
cagttttccatggtaggatgccgtctaatttgtttcgactaagttttagt
tggcggaggcaagagttcccaggactggtacttgattcttttcacacact
ggacagtaattatagcagtcaaagaagtcccatgtcccttaatccttaca
ttttggggataaatacggtagatggatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_60026919_60028050
seq2: B6Ng01-002K24.g_69_1197 (reverse)

seq1  TCATTCATCTACTGTATTTATCCACAAAATTGTAAGAATTAAGGGACATG  50
      |||| ||||||| |||||||||| ||||| |||||| |||||||||||||
seq2  TCATCCATCTACCGTATTTATCCCCAAAA-TGTAAGGATTAAGGGACATG  49

seq1  TGATTTCTTTGACTGCTATATTTACATGTCC-GTGTGTGAAAAGAATCAA  99
       || |||||||||||||||| |||| ||||| ||||||||||||||||||
seq2  GGACTTCTTTGACTGCTATAATTAC-TGTCCAGTGTGTGAAAAGAATCAA  98

seq1  GTACAAGTTCTGGGAACTCTTGCCTCTGCCAACTAAAACTTAGTCAAAAC  149
      |||| ||| ||||||||||||||||| |||||||||||||||||| ||||
seq2  GTACCAGTCCTGGGAACTCTTGCCTCCGCCAACTAAAACTTAGTCGAAAC  148

seq1  AAATTTAGACGGCATCCTACCATGGAAAACTGCAGAATGCTTCTTTAGCT  199
      ||| |||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAA-TTAGACGGCATCCTACCATGGAAAACTGCAGAATGC-TCTTTAGCT  196

seq1  AAAATTTTATATTTTTCTAACTATATTCCTTTGAGTTACTATTAGTTAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTATATTTTTCTAACTATATTCCTTTGAGTTACTATTAGTTAAG  246

seq1  TAAGAAAGATCCGAATTAATTATAACTCTTATTTTTTTTCCTCAAGGAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGATCCGAATTAATTATAACTCTTATTTTTTTTCCTCAAGGAAA  296

seq1  CATTGGAATTTCTGATAGGATTTAAGTCATTCTGTTCTTACCAAGATAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAATTTCTGATAGGATTTAAGTCATTCTGTTCTTACCAAGATAAA  346

seq1  TCTATAGGAAAATTAATTTTTTAGATAGGTAAATAAGGCAACAAAAATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGGAAAATTAATTTTTTAGATAGGTAAATAAGGCAACAAAAATTT  396

seq1  AAGTATAAAACTCTAAATGAACTCAAATAATGTAAGGTAGCTACCAAGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAAAACTCTAAATGAACTCAAATAATGTAAGGTAGCTACCAAGTT  446

seq1  GGTTAACACTATTGATTAAAAAAAAACCTTTTAAAATATTAGAACCTTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAACACTATTGATTAAAAAAAAACCTTTTAAAATATTAGAACCTTTA  496

seq1  CAATAACCAAATGATTTTCTAATTTTGTACTGATATGTTCATATAAATGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACCAAATGATTTTCTAATTTTGTACTGATATGTTCATATAAATGG  546

seq1  ATAGCCGTCTTATTTTAGTTTTTCTTTCCCATAAAATTTCAGAACAGCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCGTCTTATTTTAGTTTTTCTTTCCCATAAAATTTCAGAACAGCAT  596

seq1  GCATTCTACAAGGTCACTGCAAATACACGATATTAAAATGCAGCCAAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTACAAGGTCACTGCAAATACACGATATTAAAATGCAGCCAAATT  646

seq1  CTTTACCAACATAAATGTTTTTATGAGCAGCAGGTGTATTCTTTGCAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCAACATAAATGTTTTTATGAGCAGCAGGTGTATTCTTTGCAAGG  696

seq1  CTGTAAAGCTATTAACAGCTCAGGAAGGAGTGCATAATAACAGGCTGTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAGCTATTAACAGCTCAGGAAGGAGTGCATAATAACAGGCTGTTA  746

seq1  GCTCAGACTCCCTTGCAGGAGCACTAAGGAAGGACACTTTTGAAACCATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGACTCCCTTGCAGGAGCACTAAGGAAGGACACTTTTGAAACCATT  796

seq1  AGGACAACTAGGTTTTAAACAGCATTACATATAGGTGCTTTATGAATAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAACTAGGTTTTAAACAGCATTACATATAGGTGCTTTATGAATAGA  846

seq1  GGTTCATTTACGCTTTATATCTTTTAAGTAATGAATTTTGTTTTCTTAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATTTACGCTTTATATCTTTTAAGTAATGAATTTTGTTTTCTTAAT  896

seq1  ATGAATATGCTCATACAGAGAATTATTTAACTCTTCTCTATAAAATTCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATATGCTCATACAGAGAATTATTTAACTCTTCTCTATAAAATTCAA  946

seq1  ACTAGAAATATCTTCTAGTAATAAGAACTTGGAAATAAGTTATTATTTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGAAATATCTTCTAGTAATAAGAACTTGGAAATAAGTTATTATTTTT  996

seq1  AAATAAAATAATTTATTTTTAAATTAAATAAAATTATTATTTTTATTTAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATAATTTATTTTTAAATTAAATAAAATTATTATTTTTATTTAA  1046

seq1  TCATTTATTAAAAATCCTACAGTTAGGCGCTGCTTACAGCAAAGCCATGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATTAAAAATCCTACAGTTAGGCGCTGCTTACAGCAAAGCCATGT  1096

seq1  TAGCTAACACTTATGTTTTCTAACTATGAATTC  1132
      |||||||||||||||||||||||||||||||||
seq2  TAGCTAACACTTATGTTTTCTAACTATGAATTC  1129