BAC Information

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BAC

Clone NameB6Ng01-003G19
Chromosome16 (Build37)
Map Location 58,956,064 - 58,956,621
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181
Downstream geneOlfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6, Epha6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-003G19.bB6Ng01-003G19.g
ACCDH841139DH841140
length552221
definitionDH841139|Mus musculus domesticus DNA, BAC clone: B6Ng01-003G19, 5' end.DH841140|Mus musculus domesticus DNA, BAC clone: B6Ng01-003G19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taaggagaacaaagaaggtgttttatttttctagtctaattccaaaacta
cagcttctatgaataaaggcttatttgcagagctcattagtgactccaat
tacctgttccagatctccttgaactaactacatgcaagaattactgaact
tatccaagtcagcagtaatcataagtggaggagggatgaagatgaaatca
gaatgcacaatttctgtatgaaaagctatattttaaagtctggcttttct
actgactagtcataaaaccccggcaaagtcacctatgatctgttcttaca
ttttttcgttagtaaataggaatgaggtgtgagaatagtagtattatatt
ggagatattttgtgaggatttacacaatttgtatgattcaaacatcatat
ttcatgcaaagcttggcatgtacaaagagcatagcaatattgtgttgaag
catacaaatagttttcggaaaaccaatgactcattgaaattataaacata
atacctacatattgtagggtgaagatgatgacaaagacaactgaatggga
gg
cttgatccacgtagatttgatctgtctttttattcctcttggagctattt
tactctgttgaaatgccctgttgagactcagtaatagggtcttttccttg
tctgattgtacctagttttgttggttttggctgttgtctcttagaggcct
gctcctttctgaagggaaacagaaggagagtagatctggggaagagggaa
tgtaggtgggagctgggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_58956064_58956621
seq2: B6Ng01-003G19.b_44_601 (reverse)

seq1  CCTCCCATTCAGTTGTCTTTGTCATCATCTTCACCCTTCAATATGTAGGT  50
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCTCCCATTCAGTTGTCTTTGTCATCATCTTCACCCTACAATATGTAGGT  50

seq1  ATTTTGTTTATAATTTCAATGAGTCATTGGTTTTCCGAAAACTATTTGTA  100
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTTTATAATTTCAATGAGTCATTGGTTTTCCGAAAACTATTTGTA  100

seq1  TGCTTCAACACAATATTGCTATGCTCTTTGTACATGCCAAGCTTTGCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAACACAATATTGCTATGCTCTTTGTACATGCCAAGCTTTGCATG  150

seq1  AAATATGATGTTTGAATCATACAAATTGTGTAAATCCTCACAAAATATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGATGTTTGAATCATACAAATTGTGTAAATCCTCACAAAATATCT  200

seq1  CCAATATAATACTACTATTCTCACACCTCATTCCTATTTACTAACGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATAATACTACTATTCTCACACCTCATTCCTATTTACTAACGAAAA  250

seq1  AATGTAAGAACAGATCATAGGTGACTTTGCCGGGGTTTTATGACTAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGAACAGATCATAGGTGACTTTGCCGGGGTTTTATGACTAGTCA  300

seq1  GTAGAAAAGCCAGACTTTAAAATATAGCTTTTCATACAGAAATTGTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAAGCCAGACTTTAAAATATAGCTTTTCATACAGAAATTGTGCAT  350

seq1  TCTGATTTCATCTTCATCCCTCCTCCACTTATGATTACTGCTGACTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTTCATCTTCATCCCTCCTCCACTTATGATTACTGCTGACTTGGA  400

seq1  TAAGTTCAGTAATTCTTGCATGTAGTTAGTTCAAGGAGATCTGGAACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCAGTAATTCTTGCATGTAGTTAGTTCAAGGAGATCTGGAACAGG  450

seq1  TAATTGGAGTCACTAATGAGCTCTGCAAATAAGCCTTTATTCATAGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGGAGTCACTAATGAGCTCTGCAAATAAGCCTTTATTCATAGAAGC  500

seq1  TGTAGTTTTGGAATTAGACTAGAAAAATAAAACACCTTCTTTGTTCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTTGGAATTAGACTAGAAAAATAAAACACCTTCTTTGTTCTCCT  550

seq1  TAGAATTC  558
      ||||||||
seq2  TAGAATTC  558