BAC Information

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BAC

Clone NameB6Ng01-005B22
Chromosome16 (Build37)
Map Location 71,119,311 - 71,303,924
singlet/doubletdoublet
Overlap genenone
Upstream geneEG664930, Gbe1, D16Ertd519e, LOC100039231
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005B22.bB6Ng01-005B22.g
ACCDH842346DH842347
length1,2061,117
definitionDH842346|Mus musculus domesticus DNA, BAC clone: B6Ng01-005B22, 5' end.DH842347|Mus musculus domesticus DNA, BAC clone: B6Ng01-005B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,119,311 - 71,120,509)(71,302,812 - 71,303,924)
sequence
gaattctcaacagaggaatcttgaatgggagagaagcacttaaagaaatg
ttctttagtcatcagagaaatgcaaatcaaaatgacctggagattgcacc
ttatacccatcagaatggctaagatcaaaatctcaagtgacaacacctgc
tggcaaggatttggagaaagaaggatactccttcattgctggtaggattg
caaactggtacaaccaatcaggaaatcaagctggcctcttcctcagtgag
ttggaaatacttttacctgaagatccagctataccacacctcaactcagc
tatatttaagggcttggccactgggattttgaccatgctccaatgagttt
aagggcaacataaattggacctggagtacattttatctttttttaagtat
ttttttcagggtggggtggggaacaaaaaatgtgaaagcagacctgggag
gaatggtatgtgagtatgatcagggttcagtttatgaaatttccaattaa
ttaataaaaatattatgcctgatgactctgctaagtaggtaaagaagttt
gctggcaaatctaagaacccgagattgattcctaagatccacatggtaaa
aaaaagaacagactccctcaagttgtcctctagcctctggcatcacagtg
cattgcattgtgatatgtacaggtatacacacacacacacacacacacac
acacacacacacactcagaaacacacacactcagaaacacacacaacata
atttccaaaaagatgaatgggctcatcagtaaagcatgattttgcttaaa
tatttacaaaagtaaatacaaagttgtgaaatgaagaaaatacatgtgca
tagttagttattcattgattttggaatttatctacaatgtatttttatag
atatagaaatatgctgatactgctcctcacagatacacactctttccttt
ctgtttatgaactcagtgataaaacccactaggacacagctgaatccttg
ttatcaaataagttctcttattaataccatattaaataatgaatatcacg
gatgatgacttctagacctacagaaaaagtcaataagtcgattcagcctt
ttgtacttgccatagaccattgaagaaataacctcatttaaaggttcctt
tttatcatggtattgacagactttcggaagtatcatttgagaagacgcat
atgtag
gaattcatggctaggttggtataaaggaaatttcaggaacagaaaaagtt
aggtcccagcatggtggtacatgcctttacttatggcactcaggagacag
agacattcctctgttcagtcagggagttgggagtcagtgtagtgtgtgcg
gtacagtagagttgagagtttgtgcagttcagtccagctcaacagaggca
gttggatccaaacaataagaaggagtcagaagactagaacaaaatgccag
agttagtttgaggccaagaagaacaattcagtgagaaactaagagaagcc
agattgcatctttcagtttggagaagagttcgagccagaaatgctgagtt
gagccaccctggagaattcagaaagaactagacagggtgggatactcaac
attaagcatcccagacagcatattaatcaggtgaaaaaaagttgttcgat
gtcatgataacatacagaaaaattatggtccccaaatgtaggaaaaatta
gggaaaaatgacaaagagaaaagacagatttatatagcttaatacaagga
acaatcacatggcatctctgtgctttaacctgctatttctaacgcctggt
acagagcacacaccacctaagcaatttgtagtcaataacttagaatccat
tccatcctggtcttagcctaaggccttggaatcttcctaaaatgagagac
tatgtagtttttaatctcatcaattctttttatatattgtactacaggca
tgatatcctatgtagtaactgagaggactgtattccatccttttaggatg
gaaatagtaagtaaatagtaaattttcaaaaattaaaacttttttttttc
aagggacccttgccatttctcagtcatgagacagaggttatatttagatt
gaaatcagagaataaggactattgacccacacagtgacaaatcctaaacc
agggatgtcaccctgagagaaggacccctagtcctgcaaccatctttaga
ccaataatacataaaacctccttgggagataaaacaccactgattgccat
tcctgtaagagacttgttggtcatttgattgcattttatggagaagtcaa
gcctaaaggtaattata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71119311_71120509
seq2: B6Ng01-005B22.b_63_1251

seq1  ATCTTGAATGGGAGAGAAGCACTTAAAGAAATGTTCTTTAGTCATCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAATGGGAGAGAAGCACTTAAAGAAATGTTCTTTAGTCATCAGAG  50

seq1  AAATGCAAATCAAAATGACCTGGAGATTGCACCTTATACCCATCAGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAAATCAAAATGACCTGGAGATTGCACCTTATACCCATCAGAATG  100

seq1  GCTAAGATCAAAATCTCAAGTGACAACACCTGCTGGCAAGGATTTGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGATCAAAATCTCAAGTGACAACACCTGCTGGCAAGGATTTGGAGA  150

seq1  AAGAAGGATACTCCTTCATTGCTGGTAGGATTGCAAACTGGTACAACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGATACTCCTTCATTGCTGGTAGGATTGCAAACTGGTACAACCAA  200

seq1  TCAGGAAATCAAGCTGGCCTCTTCCTCAGTGAGTTGGAAATACTTTTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAATCAAGCTGGCCTCTTCCTCAGTGAGTTGGAAATACTTTTACC  250

seq1  TGAAGATCCAGCTATACCACACCTCAACTCAGCTATATTTAAGGGCTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATCCAGCTATACCACACCTCAACTCAGCTATATTTAAGGGCTTGG  300

seq1  CCACTGGGATTTTGACCATGCTCCAATGAGTTTAAGGGCAACATAAATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGGATTTTGACCATGCTCCAATGAGTTTAAGGGCAACATAAATTG  350

seq1  GACCTGGAGTACATTTTATCTTTTTTTAAGTATTTTTTTCAGGGTGGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGAGTACATTTTATCTTTTTTTAAGTATTTTTTTCAGGGTGGGGT  400

seq1  GGGGAACAAAAAATGTGAAAGCAGACCTGGGAGGAATGGTATGTGAGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAACAAAAAATGTGAAAGCAGACCTGGGAGGAATGGTATGTGAGTAT  450

seq1  GATCAGGGTTCAGTTTATGAAATTTCCAATTAATTAATAAAAATATTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGGGTTCAGTTTATGAAATTTCCAATTAATTAATAAAAATATTATG  500

seq1  CCTGATGACTCTGCTAAGTAGGTAAAGAAGTTTGCTGGCAAATCTAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATGACTCTGCTAAGTAGGTAAAGAAGTTTGCTGGCAAATCTAAGAA  550

seq1  CCCGAGATTGATTCCTAAGATCCACATGGTAAAAAAAAGAACAGACTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGATTGATTCCTAAGATCCACATGGTAAAAAAAAGAACAGACTCCC  600

seq1  TCAAGTTGTCCTCTAGCCTCTGGCATCACAGTGCATTGCATTGTGATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGTCCTCTAGCCTCTGGCATCACAGTGCATTGCATTGTGATATG  650

seq1  TACAGGTATACACACACACACACACACACACACACACACACACACACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTATACACACACACACACACACACACACACACACACACACACTCA  700

seq1  GAAACACACACACTCAGAAACACACACAACATAATTTCCAAAAAGATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACACACACTCAGAAACACACACAACATAATTTCCAAAAAGATGAA  750

seq1  TGGGCTCATCAGT-AAGCATGATTTTGCTTAAATTATTTACAAAAGTAAA  799
      ||||||||||||| ||||||||||||||||||| ||||||||||||||||
seq2  TGGGCTCATCAGTAAAGCATGATTTTGCTTAAA-TATTTACAAAAGTAAA  799

seq1  TACAAAGTTGTGAAATGAAGAAAATACATGTGCATAGTTAGTTATTCATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTTGTGAAATGAAGAAAATACATGTGCATAGTTAGTTATTCATT  849

seq1  GATTTTGGAATTTATCTACAATGTA-TTTTATAGATATAGAAATATGCTG  898
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GATTTTGGAATTTATCTACAATGTATTTTTATAGATATAGAAATATGCTG  899

seq1  ATACTGCTCCTCACAGATACACACTCTTTCCTTCCTGTTTATGAACTCAG  948
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATACTGCTCCTCACAGATACACACTCTTTCCTTTCTGTTTATGAACTCAG  949

seq1  TGATAAAAACCCACTAGGAACACAGCTGAATCCTTGTTATCAAATATAGT  998
      |||| ||||||||||||| ||||||||||||||||||||||||||| |||
seq2  TGAT-AAAACCCACTAGG-ACACAGCTGAATCCTTGTTATCAAATA-AGT  996

seq1  TCTCTTAATTAATTACCATATTAAATAATGAATATCACGGGATGAATTGA  1048
      |||||| ||||| ||||||||||||||||||||||||| ||||||  |||
seq2  TCTCTT-ATTAA-TACCATATTAAATAATGAATATCAC-GGATGA--TGA  1041

seq1  CTTCTAGACTTACAGAAAAAGTCAATAAAGGTCGAATTCAG-CTTTTGTA  1097
      ||||||||| ||||||||||||||||||  |||| |||||| ||||||||
seq2  CTTCTAGACCTACAGAAAAAGTCAATAA--GTCG-ATTCAGCCTTTTGTA  1088

seq1  CTTGGCATAGACCATTGAAGAAATTAGCCTCATT--AAAGTTTCTTTTTA  1145
      |||| |||||||||||||||||| || |||||||  || ||| |||||||
seq2  CTTGCCATAGACCATTGAAGAAA-TAACCTCATTTAAAGGTTCCTTTTTA  1137

seq1  TCAT-GTATTGACAGTCTCCAGAAAGTTATCATTTTGAAGAGTAGGTATA  1194
      |||| |||||||||| ||   | ||| ||||||||   |||  | | |||
seq2  TCATGGTATTGACAGACTTTCGGAAG-TATCATTT--GAGAAGACGCATA  1184

seq1  TGTAG  1199
      |||||
seq2  TGTAG  1189

seq1: chr16_71302812_71303924
seq2: B6Ng01-005B22.g_67_1183 (reverse)

seq1  TATAATATACCCTTTAGCTTGACTTTCTCAT-AAATGC-ATCAAATGA-C  47
      |||||| |||| ||  |||||||||   ||| |||||| ||||||||| |
seq2  TATAAT-TACCTTTAGGCTTGACTTCTCCATAAAATGCAATCAAATGACC  49

seq1  AAC-AGTCTCCTTTACA-GAAT-GCAATCAGT-GTGTTTTATCTCCCAA-  92
      ||| ||||||  ||||| |||| ||||||||| |||||||||||||||| 
seq2  AACAAGTCTC--TTACAGGAATGGCAATCAGTGGTGTTTTATCTCCCAAG  97

seq1  GAAGTTTTATGTATTATTGGTCTAAAGATGGTTGCAGGACTAGGGGTCCT  142
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTTATGTATTATTGGTCTAAAGATGGTTGCAGGACTAGGGGTCCT  147

seq1  TCTCTCAGGGTGACATCCCTTGTTTAGGATTTGTCACTGTGTTGGGTCAA  192
      |||||||||||||||||||| |||||||||||||||||||| ||||||||
seq2  TCTCTCAGGGTGACATCCCTGGTTTAGGATTTGTCACTGTG-TGGGTCAA  196

seq1  TAGTCCTTATTCTTCTGATTTCAATCTAAATATAACCTCTGTCTCATGAC  242
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTTATTC-TCTGATTTCAATCTAAATATAACCTCTGTCTCATGAC  245

seq1  TGAGAAATGGCAAGAGTCCCTTG-AAAAAAAAAGTTTTAATTTTTGAAAA  291
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  TGAGAAATGGCAAGGGTCCCTTGAAAAAAAAAAGTTTTAATTTTTGAAAA  295

seq1  TTTACTATTTACTTACTATTTCCATCCTAAAAGGATGGAATACAGTCCTC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATTTACTTACTATTTCCATCCTAAAAGGATGGAATACAGTCCTC  345

seq1  TCAGTTACTACATAGGATATCATGCCTGTAGTACAATATATAAAAAGAAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTACTACATAGGATATCATGCCTGTAGTACAATATATAAAAAGAAT  395

seq1  TGATGAGATTAAAAACTACATAGTCTCTCATTTTAGGAAGATTCCAAGGC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGATTAAAAACTACATAGTCTCTCATTTTAGGAAGATTCCAAGGC  445

seq1  CTTAGGCTAAGACCAGGATGGAATGGATTCTAAGTTATTGACTACAAATT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGCTAAGACCAGGATGGAATGGATTCTAAGTTATTGACTACAAATT  495

seq1  GCTTAGGTGGTGTGTGCTCTGTACCAGGCGTTAGAAATAGCAGGTTAAAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGTGGTGTGTGCTCTGTACCAGGCGTTAGAAATAGCAGGTTAAAG  545

seq1  CACAGAGATGCCATGTGATTGTTCCTTGTATTAAGCTATATAAATCTGTC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGATGCCATGTGATTGTTCCTTGTATTAAGCTATATAAATCTGTC  595

seq1  TTTTCTCTTTGTCATTTTTCCCTAATTTTTCCTACATTTGGGGACCATAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTTTGTCATTTTTCCCTAATTTTTCCTACATTTGGGGACCATAA  645

seq1  TTTTTCTGTATGTTATCATGACATCGAACAACTTTTTTTCACCTGATTAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGTATGTTATCATGACATCGAACAACTTTTTTTCACCTGATTAA  695

seq1  TATGCTGTCTGGGATGCTTAATGTTGAGTATCCCACCCTGTCTAGTTCTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGTCTGGGATGCTTAATGTTGAGTATCCCACCCTGTCTAGTTCTT  745

seq1  TCTGAATTCTCCAGGGTGGCTCAACTCAGCATTTCTGGCTCGAACTCTTC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTCTCCAGGGTGGCTCAACTCAGCATTTCTGGCTCGAACTCTTC  795

seq1  TCCAAACTGAAAGATGCAATCTGGCTTCTCTTAGTTTCTCACTGAATTGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAACTGAAAGATGCAATCTGGCTTCTCTTAGTTTCTCACTGAATTGT  845

seq1  TCTTCTTGGCCTCAAACTAACTCTGGCATTTTGTTCTAGTCTTCTGACTC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGGCCTCAAACTAACTCTGGCATTTTGTTCTAGTCTTCTGACTC  895

seq1  CTTCTTATTGTTTGGATCCAACTGCCTCTGTTGAGCTGGACTGAACTGCA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATTGTTTGGATCCAACTGCCTCTGTTGAGCTGGACTGAACTGCA  945

seq1  CAAACTCTCAACTCTACTGTACCGCACACACTACACTGACTCCCAACTCC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCTCAACTCTACTGTACCGCACACACTACACTGACTCCCAACTCC  995

seq1  CTGACTGAACAGAGGAATGTCTCTGTCTCCTGAGTGCCATAAGTAAAGGC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGAACAGAGGAATGTCTCTGTCTCCTGAGTGCCATAAGTAAAGGC  1045

seq1  ATGTACCACCATGCTGGGACCTAACTTTTTCTGTTCCTGAAATTTCCTTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCACCATGCTGGGACCTAACTTTTTCTGTTCCTGAAATTTCCTTT  1095

seq1  ATACCAACCTAGCCATGAATTC  1113
      ||||||||||||||||||||||
seq2  ATACCAACCTAGCCATGAATTC  1117