BAC Information

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BAC

Clone NameB6Ng01-005O04
Chromosome16 (Build37)
Map Location 57,389,384 - 57,390,477
singlet/doubletsinglet
Overlap gene2610528E23Rik, 4631422O05Rik
Upstream geneAbi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23, Tmem30c
Downstream geneCol8a1, LOC435480, LOC629342, LOC100043477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-005O04.bB6Ng01-005O04.g
ACCDH842899DH842900
length1,0691,186
definitionDH842899|Mus musculus domesticus DNA, BAC clone: B6Ng01-005O04, 5' end.DH842900|Mus musculus domesticus DNA, BAC clone: B6Ng01-005O04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatttctagtcagctctacaggcaattccaagatggcagcct
tcagacctcactttgaaggcggggtgttgtgttgtctcttaggcccctac
tgtgtagaactcttggtcctagtcttcctttaaccacatggctctgggca
aaaactatgcttcctgtaagtgcactgttttgtcctccctgtgaataact
ggggaggatatctgtgagtcatcttgcctctaaaactgtagccagtaatt
tcgatcagagttaaaaatacctccctttatcactggtgagcagaattctg
tctgctttaactctcgccatatgcctctctgcctcggtacatatgctccc
tctgttccgagttcttagatgttttgcatcctcctgagagagtgtgtggt
gcaaaatcagaactccagctgtccctttcctttttgatacgtacgcaccg
acatcagcatctacccagggcttctggcggcccgtccaacgtcagttctc
cattttgctgtatctcccttccattacaaagtctcatctgacttgtggag
ttgcgacagtcacccacttgctcctgacaagcttttgaggttccttccac
ccacttagttgggcctttgagtgcaaggctggtcggggtacgcttacgta
agtttgtttgcagattcccattgggtctctcaaggtcacagacagccgtc
ttttgaattttgtatcctttgaaagaataggcactcagacactagtattc
agcagcaagaccttaggaagagtaagaagttcacacacatgtgctctccc
attctgagcacaccgcacacacccgaattcacttcccaaacagtgacgca
tgccatgtttaggaaaaagactgcaatttttttaaaccttttacccctgt
tgtaatctgtgaagcagaatgcttcactcacttgatctcttagacaccac
cagatcaagagagctgtcacagaaatgtttagtcgcacgtgctgatgtgg
ctcagactatagcatacatcagctagaaaatatgttttcgattatagagt
ttacacactgagagagaag
gaattctgggcagtacaggtggttgtaagttttgcttggaaggagaagca
gccagatatgtgattgttcaacaattcatggactatggccaacggattgg
ctggatggtcaggggcttggaaagagcatgattgaaaaattgatgagaaa
gatgtcaacagaagaaatatgtagatagatctcgccaaataggtgaagga
tgtgaagataattgtgtcttatgtagtcatcaaaaggtgacttcagctaa
ggaggagttcagtaatcaagtagagaggatggcctcatctgcagaaaaca
gcctctttgcccagtcatgaatgaccatggtggcagagatgcatgagact
gatgacatggacttccactcatcacggctgacttggttatagctactgct
gaatgccagatctgccaataccagagaccaacactgagtcccagatatgg
tactattccctggggtgatcagccagtgacctgatgtcaggatgacttac
actgaaccacttatttcatggagaggataccgctctttttattggagaac
ttattttggtcatggatttgcttttgctgcatgtaatgcttctgcccaaa
ccaccaaacccaccagaatgccttctccaccatcatggtatttaacacag
cattgcttctggtccaggaagtcacttcacaaagaagtgtaacaatgggc
ccacaatcacggaatctactggttttaccatgttctccaccatcctgaag
catctggcctgatagaaagatggcatggccttttgaagacacagttatag
tgacactttggtagcagtagcatggagggctggggcagggtcctcctaaa
ggtagaaaattctttgagtccttatggttattcccatacccaggatccat
gggtccaggaatcaagggtggaaaaagaaacagttcactcactatcaccc
tagtaacccagaagaaaatgttgtttcctgtctgcactgaagtctgctgg
ctagaactttggttcaaaggggagcactctgcagaacatacaaaacatca
atggaactggaagctcaggcctcccttctagctacttggcttctggatgc
acgtgacaatgaatacaggttggaaggagtatgatcagatgatggaatga
attgtttccccaatgcagggtcgatggtatggtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57389384_57390477
seq2: B6Ng01-005O04.b_44_1112 (reverse)

seq1  CTTCT---TCAGTTGTGTAAACTCTATACATCTGAAAACATATTTTCTTA  47
      |||||   |||| ||||||||||||||| ||| |||||||||||||||  
seq2  CTTCTCTCTCAG-TGTGTAAACTCTATA-ATC-GAAAACATATTTTCT--  45

seq1  AGCTGATTGTATGCTATAAGTTCCCTGAAGGCCACATCCAGGCACGTGCG  97
      |||||| |||||||||| |||   ||||  ||||||||   |||||||||
seq2  AGCTGA-TGTATGCTAT-AGT---CTGA--GCCACATC--AGCACGTGCG  86

seq1  ACTAAACATTTTCTTGTTGACAGCTTCTCTTTGAATCTGGTGGTTGTCCT  147
      |||||||| |||||   ||||||| ||||||   ||||||||| ||| ||
seq2  ACTAAACA-TTTCT--GTGACAGC-TCTCTT--GATCTGGTGG-TGT-CT  128

seq1  AAGAGATTCAAGTGAGGTGAAAGCATTTCTGCTTCACAGATTACAACAGG  197
      |||||| |||||||| ||| ||||| ||||||||||||||||||||||||
seq2  AAGAGA-TCAAGTGA-GTG-AAGCA-TTCTGCTTCACAGATTACAACAGG  174

seq1  GGTTAAAAGGTTTAAAAAAAATTGCAGTCTTTTTCCTAAACATGGCATGC  247
      || |||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GG-TAAAAGGTTT-AAAAAAATTGCAGTCTTTTTCCTAAACATGGCATGC  222

seq1  GTCACTGTTTGGGAAGTGAATTCGGGTGTGTGCGGTGTGCTCAGAATGGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGTTTGGGAAGTGAATTCGGGTGTGTGCGGTGTGCTCAGAATGGG  272

seq1  AGAGCACATGTGTGTGAACTTCTTACTCTTCCTAAGGTCTTGCTGCTGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACATGTGTGTGAACTTCTTACTCTTCCTAAGGTCTTGCTGCTGAA  322

seq1  TACTAGTGTCTGAGTGCCTATTCTTTCAAAGGATACAAAATTCAAAAGAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGTGTCTGAGTGCCTATTCTTTCAAAGGATACAAAATTCAAAAGAC  372

seq1  GGCTGTCTGTGACCTTGAGAGACCCAATGGGAATCTGCAAACAAACTTAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCTGTGACCTTGAGAGACCCAATGGGAATCTGCAAACAAACTTAC  422

seq1  GTAAGCGTACCCCGACCAGCCTTGCACTCAAAGGCCCAACTAAGTGGGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCGTACCCCGACCAGCCTTGCACTCAAAGGCCCAACTAAGTGGGTG  472

seq1  GAAGGAACCTCAAAAGCTTGTCAGGAGCAAGTGGGTGACTGTCGCAACTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAACCTCAAAAGCTTGTCAGGAGCAAGTGGGTGACTGTCGCAACTC  522

seq1  CACAAGTCAGATGAGACTTTGTAATGGAAGGGAGATACAGCAAAATGGAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTCAGATGAGACTTTGTAATGGAAGGGAGATACAGCAAAATGGAG  572

seq1  AACTGACGTTGGACGGGCCGCCAGAAGCCCTGGGTAGATGCTGATGTCGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACGTTGGACGGGCCGCCAGAAGCCCTGGGTAGATGCTGATGTCGG  622

seq1  TGCGTACGTATCAAAAAGGAAAGGGACAGCTGGAGTTCTGATTTTGCACC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTACGTATCAAAAAGGAAAGGGACAGCTGGAGTTCTGATTTTGCACC  672

seq1  ACACACTCTCTCAGGAGGATGCAAAACATCTAAGAACTCGGAACAGAGGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTCTCTCAGGAGGATGCAAAACATCTAAGAACTCGGAACAGAGGG  722

seq1  AGCATATGTACCGAGGCAGAGAGGCATATGGCGAGAGTTAAAGCAGACAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATGTACCGAGGCAGAGAGGCATATGGCGAGAGTTAAAGCAGACAG  772

seq1  AATTCTGCTCACCAGTGATAAAGGGAGGTATTTTTAACTCTGATCGAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGCTCACCAGTGATAAAGGGAGGTATTTTTAACTCTGATCGAAAT  822

seq1  TACTGGCTACAGTTTTAGAGGCAAGATGACTCACAGATATCCTCCCCAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCTACAGTTTTAGAGGCAAGATGACTCACAGATATCCTCCCCAGT  872

seq1  TATTCACAGGGAGGACAAAACAGTGCACTTACAGGAAGCATAGTTTTTGC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACAGGGAGGACAAAACAGTGCACTTACAGGAAGCATAGTTTTTGC  922

seq1  CCAGAGCCATGTGGTTAAAGGAAGACTAGGACCAAGAGTTCTACACAGTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCCATGTGGTTAAAGGAAGACTAGGACCAAGAGTTCTACACAGTA  972

seq1  GGGGCCTAAGAGACAACACAACACCCCGCCTTCAAAGTGAGGTCTGAAGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTAAGAGACAACACAACACCCCGCCTTCAAAGTGAGGTCTGAAGG  1022

seq1  CTGCCATCTTGGAATTGCCTGTAGAGCTGACTAGAAATGAAGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATCTTGGAATTGCCTGTAGAGCTGACTAGAAATGAAGAATTC  1069