BAC Information

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BAC

Clone NameB6Ng01-006A13
Chromosome16 (Build37)
Map Location 60,775,923 - 60,776,481
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha6, LOC100043804, EG668168, LOC668170
Downstream geneLOC100043524, LOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006A13.bB6Ng01-006A13.g
ACCDH843004DH843005
length1,175889
definitionDH843004|Mus musculus domesticus DNA, BAC clone: B6Ng01-006A13, 5' end.DH843005|Mus musculus domesticus DNA, BAC clone: B6Ng01-006A13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatacagaatggctgagaagcacctgaaaaaatg
ttcagcctccttaatcatcagggaaatgcaaatcaaaacatccctgagat
tctacctcattccagtcagaatagtaagatcaaaaattcaggtgacagta
gatgctggcaaggatgtggataaagacgaacaccccttcattgttggtgg
gattgcaagcttgtttaaacactctggaaatcagtctggtggttcctcag
aaaattggacttagtactactggaggatcccgcagtatttctcctgggca
tatacccagaaagtgttccaaccagtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaaactggaaagaaacaaggat
gcccctcaacagaggagtgaatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctatggaa
atggatggacctggagagcatcatcctgagtgaggtaacccaatcacaat
agacgtcatacaatatgtactcactaataagtggatattaacccagaaac
ttaggatactcaagatataatatacaatttgcaaaccacatgaaactcaa
gaagaatgaagaccaaagtctggacactttgacccttcttataattggga
acaaaacacccatggaaggagtttcagagacaaagtttggacctgagaag
aaaggatggaccatctagagattgccatatccggggatccatcccataat
cagctttcaaacgctgacaccattgcatacaatagcaagattttgctgaa
aggacccttatatagctgtctcttgtgagaccatgctggggcgtagcaaa
cacagtagtggatggtcacagtcaactattggatggatcacaggccccaa
tgtaggagctagagaagtacccaagagttgagggaatctgcaaccctatt
ggtggaacaacaatctgaactaaccagtacccactggagcttgttttctt
tagctgcatatgtatcagaatgattgcctagttggcatcatggaaagaga
ggcccatgtcttggtaactttatttgcccttatacaggcgaagcagggcc
aagaattgaatgtattggttgaaga
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaatcctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggtttttttggttgggagactattaataactgcttctatttctt
taggtgatatgggactgtttagatggtcaacttgatcctgattcaacttt
ggtacctggtatctgtccagaaatttgtccatttcgtccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtctcccttttcatttctgattttgttaatt
aggattttgtccctgtgccctttagtgagtctagctaagggtttatctac
cttgttgattttctcaagaaccaactcctcgttggttaattctttgcata
tttcatcttgtttcacttggtgatttcaccccctgagtttgatatttcct
gccgtctactcctcttggggtggaattgctccctttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_60775923_60776481
seq2: B6Ng01-006A13.g_403_957 (reverse)

seq1  AAAAAAGGAAGCAAATTCA-CCCAAGAGGAGTAGACGGCAGGAAATAATC  49
      |||||||| ||||| | || |||||||||||||||||||||||||| |||
seq2  AAAAAAGGGAGCAATTCCACCCCAAGAGGAGTAGACGGCAGGAAAT-ATC  49

seq1  AAACTCA-GGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAA  98
      ||||||| ||||||||||| ||||||| ||||||||| ||| ||| ||||
seq2  AAACTCAGGGGGTGAAATC-ACCAAGT-GAAACAAGATGAAATATGCAAA  97

seq1  GAATTAACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGAT  148
      ||||||||| |||||||||||||||| ||||||||||||||||| |||||
seq2  GAATTAACC-AACGAGGAGTTGGTTC-TTGAGAAAATCAACAAGGTAGAT  145

seq1  AAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAA  195

seq1  CAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCC  245

seq1  AAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAA  295

seq1  AACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTT  345

seq1  GAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACCTAAAGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGGATCAAGTTGACCATCTAAACAGTCCCATATCACCTAAAGAAA  395

seq1  TAGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAAGCCCAGGACCAGAT  448
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAGAAGCAGTTATTAATAGTCTCCCAACCAAAAAAA-CCCAGGACCAGAT  444

seq1  GGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAGATCTAATTCCAAT  494

seq1  TCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCTACCCAACT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGTACTCTACCCAACT  544

seq1  CATTTTATGAA  559
      |||||||||||
seq2  CATTTTATGAA  555