BAC Information

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BAC

Clone NameB6Ng01-007B21
Chromosome16 (Build37)
Map Location 39,983,540 - 40,145,066
singlet/doubletdoublet
Overlap genenone
Upstream geneIgsf11, LOC667400
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007B21.bB6Ng01-007B21.g
ACCDH843786DH843787
length795975
definitionDH843786|Mus musculus domesticus DNA, BAC clone: B6Ng01-007B21, 5' end.DH843787|Mus musculus domesticus DNA, BAC clone: B6Ng01-007B21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,144,272 - 40,145,066)(39,983,540 - 39,984,520)
sequence
gaattcactcattcccttgtagcactatacattaatttagagtgtgcttt
gttctattacgtgggtttcaaattacttccaagccacagaaatactgttt
ttgggttttttttttttttttttttggtaattgataaagtaactttctat
tcatttttttgctactttgccaaataaatttagcaacattatttcttggt
catatataatgatagctctatttgtgaaaaataattaactgataccacag
ctactatttaattatactggcttcctgggcttgctaagattaagttactt
ggtttcttttatacaattcacttttgtattccagttattaattccatcac
ttcatttcaacccctgctccacacagctcttgatagcgtaccattttgtt
tatgccctgcaagtaaagtatatgaccaaggtggacgcccagtttatagg
agtttcagatggaagatataatgggacgaaacgctctgatttcaaccatt
cgctctcagtcccctttaccgatgctgatgattgagggaattctattgac
ttagcaagggaaagaggaaaaacatttttcatctctatttagcacttgtt
ctctctgtcatgacatgcatgcatgcatgttagtcattctgagcaactaa
cagaaagccttctcctctcaagatccctgatcaagatcaaggacaaagga
taaatccacatgtcaaagtttaatgtcaagttgccctttcttttaaaacc
cattgggatttctcttagagaaatttggttggtggtggttgtttt
gaattcaacgggtacaatgtgctactagtgtcaaggtcagaaatatggca
gagacattacctgcagatctgaaagaaaccacagacaccatgatcacata
attcaaatattaaattgcatcactgaataaaatgaaatagttttgttagg
gtctccatccagcaaaattcccaggaagagatggaaaatccacctttgct
gcatccttgtgacttagaggagttctgactggcctctgctctcactagca
tgtgttcctgagtcattcattgagttggacatgtttggtaccccgctgag
aatttttctctgaatgtttagaagaaggtaggatgggtaggtttttcatg
ttggagttttctctctaaataacttcaaactagaggtgttaaagcaagaa
ggcagatgatgtaaacaagagaggccaagaagctgagctatgatagatag
ggtcagccatgtcaaaactggtttgacctagtgcttcaaaaccatacata
aaggattgggaatgctgtgtaatgtggaatggcattggataggatgaggc
ttcagatggccactagaatctcaaggtggaggtcactgtgacatttggag
gaggctttcaagcaatccttggctaagaagggagaggccagagagaaagg
gaaccacgggataagaagatgaacagtgagttccaagatttttctcccgc
gaaggggaaagtcaaatgtatgttgcgacaaggtcaaatcaaggtcttaa
gaagacaagggcttttcacctatgtttgctgagatgaaaggggactttgg
ctgcattggaccgacctctcacacacagcaaacccaggccgcggcgctgc
caggctgtgcgcactagatggcagtagcggggccctttcgctgggctccg
ggttctataagcgcttgcctgttaagtacagtctcatttagttgaagctg
caggggaataagggagagagggtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_40144272_40145066
seq2: B6Ng01-007B21.b_50_844 (reverse)

seq1  AAAACAACCACCACCAACCAAATTTCTCTAAGAGAAATCCCAATGGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACCACCACCAACCAAATTTCTCTAAGAGAAATCCCAATGGGTTT  50

seq1  TAAAAGAAAGGGCAACTTGACATTAAACTTTGACATGTGGATTTATCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAAGGGCAACTTGACATTAAACTTTGACATGTGGATTTATCCTT  100

seq1  TGTCCTTGATCTTGATCAGGGATCTTGAGAGGAGAAGGCTTTCTGTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGATCTTGATCAGGGATCTTGAGAGGAGAAGGCTTTCTGTTAGT  150

seq1  TGCTCAGAATGACTAACATGCATGCATGCATGTCATGACAGAGAGAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGAATGACTAACATGCATGCATGCATGTCATGACAGAGAGAACAA  200

seq1  GTGCTAAATAGAGATGAAAAATGTTTTTCCTCTTTCCCTTGCTAAGTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAAATAGAGATGAAAAATGTTTTTCCTCTTTCCCTTGCTAAGTCAA  250

seq1  TAGAATTCCCTCAATCATCAGCATCGGTAAAGGGGACTGAGAGCGAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTCCCTCAATCATCAGCATCGGTAAAGGGGACTGAGAGCGAATGG  300

seq1  TTGAAATCAGAGCGTTTCGTCCCATTATATCTTCCATCTGAAACTCCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATCAGAGCGTTTCGTCCCATTATATCTTCCATCTGAAACTCCTAT  350

seq1  AAACTGGGCGTCCACCTTGGTCATATACTTTACTTGCAGGGCATAAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGCGTCCACCTTGGTCATATACTTTACTTGCAGGGCATAAACAA  400

seq1  AATGGTACGCTATCAAGAGCTGTGTGGAGCAGGGGTTGAAATGAAGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTACGCTATCAAGAGCTGTGTGGAGCAGGGGTTGAAATGAAGTGAT  450

seq1  GGAATTAATAACTGGAATACAAAAGTGAATTGTATAAAAGAAACCAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAATAACTGGAATACAAAAGTGAATTGTATAAAAGAAACCAAGTA  500

seq1  ACTTAATCTTAGCAAGCCCAGGAAGCCAGTATAATTAAATAGTAGCTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATCTTAGCAAGCCCAGGAAGCCAGTATAATTAAATAGTAGCTGTG  550

seq1  GTATCAGTTAATTATTTTTCACAAATAGAGCTATCATTATATATGACCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGTTAATTATTTTTCACAAATAGAGCTATCATTATATATGACCAA  600

seq1  GAAATAATGTTGCTAAATTTATTTGGCAAAGTAGCAAAAAAATGAATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAATGTTGCTAAATTTATTTGGCAAAGTAGCAAAAAAATGAATAGA  650

seq1  AAGTTACTTTATCAATTACCAAAAAAAAAAAAAAAAAAAACCCAAAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACTTTATCAATTACCAAAAAAAAAAAAAAAAAAAACCCAAAAACA  700

seq1  GTATTTCTGTGGCTTGGAAGTAATTTGAAACCCACGTAATAGAACAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCTGTGGCTTGGAAGTAATTTGAAACCCACGTAATAGAACAAAGC  750

seq1  ACACTCTAAATTAATGTATAGTGCTACAAGGGAATGAGTGAATTC  795
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTAAATTAATGTATAGTGCTACAAGGGAATGAGTGAATTC  795

seq1: chr16_39983540_39984520
seq2: B6Ng01-007B21.g_64_1038

seq1  GAATTCAACGGGTACAATGTGCTACTAGTGTCAAGGTCAGAAATATGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGGGTACAATGTGCTACTAGTGTCAAGGTCAGAAATATGGCA  50

seq1  GAGACATTACCTGCAGATCTGAAAGAAACCACAGACACCATGATCACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATTACCTGCAGATCTGAAAGAAACCACAGACACCATGATCACATA  100

seq1  ATTCAAATATTAAATTGCATCACTGAATAAAATGAAATAGTTTTGTTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATATTAAATTGCATCACTGAATAAAATGAAATAGTTTTGTTAGG  150

seq1  GTCTCCATCCAGCAAAATTCCCAGGAAGAGATGGAAAATCCACCTTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCATCCAGCAAAATTCCCAGGAAGAGATGGAAAATCCACCTTTGCT  200

seq1  GCATCCTTGTGACTTAGAGGAGTTCTGACTGGCCTCTGCTCTCACTAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTTGTGACTTAGAGGAGTTCTGACTGGCCTCTGCTCTCACTAGCA  250

seq1  TGTGTTCCTGAGTCATTCATTGAGTTGGACATGTTTGGTACCCCGCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCCTGAGTCATTCATTGAGTTGGACATGTTTGGTACCCCGCTGAG  300

seq1  AATTTTTCTCTGAATGTTTAGAAGAAGGTAGGATGGGTAGGTTTTTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTCTGAATGTTTAGAAGAAGGTAGGATGGGTAGGTTTTTCATG  350

seq1  TTGGAGTTTTCTCTCTAAATAACTTCAAACTAGAGGTGTTAAAGCAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTTTTCTCTCTAAATAACTTCAAACTAGAGGTGTTAAAGCAAGAA  400

seq1  GGCAGATGATGTAAACAAGAGAGGCCAAGAAGCTGAGCTATGATAGATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATGATGTAAACAAGAGAGGCCAAGAAGCTGAGCTATGATAGATAG  450

seq1  GGTCAGCCATGTCAAAACTGGTTTGACCTAGTGCTTCAAAACCATACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCCATGTCAAAACTGGTTTGACCTAGTGCTTCAAAACCATACATA  500

seq1  AAGGATTGGGAATGCTGTGTAATGTGGAATGGCATTGGATAGGATGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTGGGAATGCTGTGTAATGTGGAATGGCATTGGATAGGATGAGGC  550

seq1  TTCAGATGGCCACTAGAATCTCAAGGTGGAGGTCACTGTGACATTTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATGGCCACTAGAATCTCAAGGTGGAGGTCACTGTGACATTTGGAG  600

seq1  GAGGCTTTCAAGCAATCCTTGGCTAAGAAGGGAGAGGCCAGAGAGAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTTCAAGCAATCCTTGGCTAAGAAGGGAGAGGCCAGAGAGAAAGG  650

seq1  GAACCACGGGATAAGAAGATGAACAGTGAGTTCCAAGATTTTTCTCCCGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACGGGATAAGAAGATGAACAGTGAGTTCCAAGATTTTTCTCCCGC  700

seq1  GAAGGGGAAAGTCAAATGTATGTTGCGACAAGGTCAAATCAAGGTCTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGAAAGTCAAATGTATGTTGCGACAAGGTCAAATCAAGGTCTTAA  750

seq1  GAAGACAAGGGCTTTTCACCTATGTTTGCTGAGATGAAAGGGGACTTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAAGGGCTTTTCACCTATGTTTGCTGAGATGAAAGGGGACTTTGG  800

seq1  CTGCATTGGACCGACCTCTCACACACAAGCAAACCCAGGGCCGCGGCGCT  850
      |||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  CTGCATTGGACCGACCTCTCACACAC-AGCAAACCCA-GGCCGCGGCGCT  848

seq1  GCCAGGCTGTGCGCACTAGATGGCAGTAGCGGGGCCCTTTCGGCTGGGCT  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GCCAGGCTGTGCGCACTAGATGGCAGTAGCGGGGCCCTTTC-GCTGGGCT  897

seq1  CCGGGTCCTATAAGGCGCTTGCTTGTTTAAGTACAGTCTCATTTAGTTGG  950
      |||||| |||||| |||||||| || ||||||||||||||||||||||| 
seq2  CCGGGTTCTATAA-GCGCTTGCCTG-TTAAGTACAGTCTCATTTAGTTGA  945

seq1  AGCTGCAGGGGAGTAAGGGAGAGGAGGGTAG  981
      |||||||||||| ||||||||| ||||||||
seq2  AGCTGCAGGGGAATAAGGGAGA-GAGGGTAG  975