BAC Information

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BAC

Clone NameB6Ng01-008B14
Chromosome16 (Build37)
Map Location 60,338,998 - 60,460,266
singlet/doubletdoublet
Overlap geneEpha6, LOC100043804
Upstream geneOlfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6
Downstream geneEG668168, LOC668170, LOC100043524, LOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008B14.bB6Ng01-008B14.g
ACCDH844470DH844471
length8841,137
definitionDH844470|Mus musculus domesticus DNA, BAC clone: B6Ng01-008B14, 5' end.DH844471|Mus musculus domesticus DNA, BAC clone: B6Ng01-008B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,338,998 - 60,339,881)(60,459,103 - 60,460,266)
sequence
gaattcctttcctgatcagagtgacaaaattcctataaccaaaattgtac
ctttcatcctccctcttcatctttataaagtttttcctttctttttagat
attcaatgtctcctttttcatttactttgcaatgaactcacaaaaatact
taagtgcattgctttcatcattaagcaagaaataataaaaagagatttca
atgctcagtttttattgattcattaccatttacctgtttgtccttttgtg
tgtgtaagtgcatgcacacatgtatgtacatgtagggacccaaggacaac
tccaagtattggtctgtaggtccttattattattattattatttactttt
tgttgttgttgttttgaattgttcttttatcttctaaaacgcagtgttca
ctttgaatctctcagtttctggggattcacctagtaggctaggctggcag
ccagggagtaccagggacgatcctatctctacttctctgctatgagatta
taggtacgctctaccatacacagctgctttattttggggattaatgccag
atccccctgcttgaagaaaggacttttatcaactgagctatctctgggag
ttccttaccttaacattcattgatatgccttttgcatcctacaatctata
gtctttattgtagaaagagttgtatcaaagatcagtttaactagtaattt
tctccatatcatatttttctgatgtttaaaaaaattctctgttcctacag
tataatgctaaccacgattttctcttgggttgcttattctgctagctatg
tgtgttatctctgggtaccattagttcctacaccatgatctatctctctc
tctctctctctctctctctctctctctctcacac
gaattcacatatgcacacacaaatacacatacccccccacacacacacat
acacaaatatttatatttgcctaatttacatgatgtatttaatgatatgc
ttaaaatgaatatatgttcttaaaactagaataatttacttatttaataa
tttatttccctcttcatagtacagcatgaataactaatgaattaattata
aacttcaatgtatattattggctttgtcatttcacttttacacaattatt
ttgcaacctttactatatcctgaaacaagtctacaattagagtgtagggt
ttagtgttgtcacctttgtcagatgttgtgttcacctgggagatttgcct
ttgaacatgtctatggaggattggcttatttggaagatggacccactgag
ggtgctatcattccctaagtagaggatcctggatttagaactatgagaaa
ggaagctgagcattagcaaatattatgacttctttgttttctgcttttta
attgtagagacattattatcagatgccttgtgctcctgctgcttttgttt
cctatcaatgatggaccataacctgggactaagagacaaaataaaacagt
tctcttctaaactgtttctttgagaataatttgtcaatgcaaaggaaaaa
gacactaaggcatgtagtttctagataagaatcttaagtaccatttcagt
attcataaatatgttgtcctgtttgttgtttattggtgccgctaatcatg
tatcaatgctatttattttagaaattccagtcactttcagtatttatgaa
gtatttttagtctttaccctattatcaagatactattgtggtacagtatg
tgtgtagatgtattttaattattatgagattcattcttgaaaacacactt
caagttgtttgatcccaatacactcatttttagaaatgttggggggttca
aatatttcaaaagatgatatgatgttctaaaacagtctttggaagggaaa
tatgggcaggattaggcagtattaaatttggctattcatatcgtggtact
cttagcactggtatgggtaatcaatgtttctttgacatgagctgttgcat
cactaataagttgtaaattcctccctagaaactcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_60338998_60339881
seq2: B6Ng01-008B14.b_46_929

seq1  GAATTCCTTTCCTGATCAGAGTGACAAAATTCCTATAACCAAAATTGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCCTGATCAGAGTGACAAAATTCCTATAACCAAAATTGTAC  50

seq1  CTTTCATCCTCCCTCTTCATCTTTATAAAGTTTTTCCTTTCTTTTTAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATCCTCCCTCTTCATCTTTATAAAGTTTTTCCTTTCTTTTTAGAT  100

seq1  ATTCAATGTCTCCTTTTTCATTTACTTTGCAATGAACTCACAAAAATACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATGTCTCCTTTTTCATTTACTTTGCAATGAACTCACAAAAATACT  150

seq1  TAAGTGCATTGCTTTCATCATTAAGCAAGAAATAATAAAAAGAGATTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCATTGCTTTCATCATTAAGCAAGAAATAATAAAAAGAGATTTCA  200

seq1  ATGCTCAGTTTTTATTGATTCATTACCATTTACCTGTTTGTCCTTTTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCAGTTTTTATTGATTCATTACCATTTACCTGTTTGTCCTTTTGTG  250

seq1  TGTGTAAGTGCATGCACACATGTATGTACATGTAGGGACCCAAGGACAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAAGTGCATGCACACATGTATGTACATGTAGGGACCCAAGGACAAC  300

seq1  TCCAAGTATTGGTCTGTAGGTCCTTATTATTATTATTATTATTTACTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTATTGGTCTGTAGGTCCTTATTATTATTATTATTATTTACTTTT  350

seq1  TGTTGTTGTTGTTTTGAATTGTTCTTTTATCTTCTAAAACGCAGTGTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTGTTTTGAATTGTTCTTTTATCTTCTAAAACGCAGTGTTCA  400

seq1  CTTTGAATCTCTCAGTTTCTGGGGATTCACCTAGTAGGCTAGGCTGGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATCTCTCAGTTTCTGGGGATTCACCTAGTAGGCTAGGCTGGCAG  450

seq1  CCAGGGAGTACCAGGGACGATCCTATCTCTACTTCTCTGCTATGAGATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAGTACCAGGGACGATCCTATCTCTACTTCTCTGCTATGAGATTA  500

seq1  TAGGTACGCTCTACCATACACAGCTGCTTTATTTTGGGGATTAATGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTACGCTCTACCATACACAGCTGCTTTATTTTGGGGATTAATGCCAG  550

seq1  ATCCCCCTGCTTGAAGAAAGGACTTTTATCAACTGAGCTATCTCTGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCTGCTTGAAGAAAGGACTTTTATCAACTGAGCTATCTCTGGGAG  600

seq1  TTCCTTACCTTAACATTCATTGATATGCCTTTTGCATCCTACAATCTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTACCTTAACATTCATTGATATGCCTTTTGCATCCTACAATCTATA  650

seq1  GTCTTTATTGTAGAAAGAGTTGTATCAAAGATCAGTTTAACTAGTAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTATTGTAGAAAGAGTTGTATCAAAGATCAGTTTAACTAGTAATTT  700

seq1  TCTCCATATCATATTTTTCTGATGTTTAAAAAAATTCTCTGTTCCTACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATATCATATTTTTCTGATGTTTAAAAAAATTCTCTGTTCCTACAG  750

seq1  TATAATGCTAACCACGATTTTCTCTTGGGTTGCTTATTCTGCTAGCTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGCTAACCACGATTTTCTCTTGGGTTGCTTATTCTGCTAGCTATG  800

seq1  TGTGTTATCTCTGGGTACCATTAGTTCCTACACCATGATCTATCTCTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTATCTCTGGGTACCATTAGTTCCTACACCATGATCTATCTCTCTC  850

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTC  884
      |||||||||||||||||||||||||||||||| |
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACAC  884

seq1: chr16_60459103_60460266
seq2: B6Ng01-008B14.g_68_1204 (reverse)

seq1  AATGAGTTTCTAGAGAAGAGAATGTTAAACAACATTTAAATAAGTGATAC  50
      ||||||||||||| ||   |||| |   ||||| |    || |||||| |
seq2  AATGAGTTTCTAGGGA--GGAATTT---ACAACTT----ATTAGTGATGC  41

seq1  GAACAAGCTCATGTCAAAAGAAACATTTGATTTACCCAATACCAGTTGCT  100
       ||| |||||||||| ||||||||| |||| |||||| ||||||| ||||
seq2  -AAC-AGCTCATGTC-AAAGAAACA-TTGA-TTACCC-ATACCAG-TGCT  84

seq1  ATAGAGTACACAGATTATGAAATAAGCCAAATTTAATACTGCCTAATTCC  150
      | ||||||| ||   ||||||   |||||||||||||||||||||||  |
seq2  A-AGAGTAC-CACGATATGAA--TAGCCAAATTTAATACTGCCTAAT--C  128

seq1  CTGCCCATAATTTCCTTTCCAAAGACTGTTTTTAGAACATCATATTCATC  200
      |||||||| |||||| |||||||||||| ||||||||||||||| |||||
seq2  CTGCCCAT-ATTTCCCTTCCAAAGACTG-TTTTAGAACATCATA-TCATC  175

seq1  TTTTGAAAATATTTGAAACCCCCCAACATTTCTAAAAATGAGTGTATTGG  250
      ||||| ||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTTG-AAATATTTG-AACCCCCCAACATTTCTAAAAATGAGTGTATTGG  223

seq1  GATCAAACAACTTGAAGTGTGTTTTCAAGAATGAATCTCATAATAATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAACAACTTGAAGTGTGTTTTCAAGAATGAATCTCATAATAATTAA  273

seq1  AATACATCTACACACATACTGTACCACAATAGTATCTTGATAATAGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATCTACACACATACTGTACCACAATAGTATCTTGATAATAGGGTA  323

seq1  AAGACTAAAAATACTTCATAAATACTGAAAGTGACTGGAATTTCTAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAAAAATACTTCATAAATACTGAAAGTGACTGGAATTTCTAAAAT  373

seq1  AAATAGCATTGATACATGATTAGCGGCACCAATAAACAACAAACAGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCATTGATACATGATTAGCGGCACCAATAAACAACAAACAGGACA  423

seq1  ACATATTTATGAATACTGAAATGGTACTTAAGATTCTTATCTAGAAACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTATGAATACTGAAATGGTACTTAAGATTCTTATCTAGAAACTA  473

seq1  CATGCCTTAGTGTCTTTTTCCTTTGCATTGACAAATTATTCTCAAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTAGTGTCTTTTTCCTTTGCATTGACAAATTATTCTCAAAGAAA  523

seq1  CAGTTTAGAAGAGAACTGTTTTATTTTGTCTCTTAGTCCCAGGTTATGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTAGAAGAGAACTGTTTTATTTTGTCTCTTAGTCCCAGGTTATGGT  573

seq1  CCATCATTGATAGGAAACAAAAGCAGCAGGAGCACAAGGCATCTGATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATTGATAGGAAACAAAAGCAGCAGGAGCACAAGGCATCTGATAAT  623

seq1  AATGTCTCTACAATTAAAAAGCAGAAAACAAAGAAGTCATAATATTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTCTACAATTAAAAAGCAGAAAACAAAGAAGTCATAATATTTGCT  673

seq1  AATGCTCAGCTTCCTTTCTCATAGTTCTAAATCCAGGATCCTCTACTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCAGCTTCCTTTCTCATAGTTCTAAATCCAGGATCCTCTACTTAG  723

seq1  GGAATGATAGCACCCTCAGTGGGTCCATCTTCCAAATAAGCCAATCCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGATAGCACCCTCAGTGGGTCCATCTTCCAAATAAGCCAATCCTCC  773

seq1  ATAGACATGTTCAAAGGCAAATCTCCCAGGTGAACACAACATCTGACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACATGTTCAAAGGCAAATCTCCCAGGTGAACACAACATCTGACAAA  823

seq1  GGTGACAACACTAAACCCTACACTCTAATTGTAGACTTGTTTCAGGATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAACACTAAACCCTACACTCTAATTGTAGACTTGTTTCAGGATAT  873

seq1  AGTAAAGGTTGCAAAATAATTGTGTAAAAGTGAAATGACAAAGCCAATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGGTTGCAAAATAATTGTGTAAAAGTGAAATGACAAAGCCAATAA  923

seq1  TATACATTGAAGTTTATAATTAATTCATTAGTTATTCATGCTGTACTATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTGAAGTTTATAATTAATTCATTAGTTATTCATGCTGTACTATG  973

seq1  AAGAGGGAAATAAATTATTAAATAAGTAAATTATTCTAGTTTTAAGAACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGAAATAAATTATTAAATAAGTAAATTATTCTAGTTTTAAGAACA  1023

seq1  TATATTCATTTTAAGCATATCATTAAATACATCATGTAAATTAGGCAAAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCATTTTAAGCATATCATTAAATACATCATGTAAATTAGGCAAAT  1073

seq1  ATAAATATTTGTGTATGTGTGTGTGTGGGGGGGTATGTGTATTTGTGTGT  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATTTGTGTATGTGTGTGTGTGGGGGGGTATGTGTATTTGTGTGT  1123

seq1  GCATATGTGAATTC  1164
      ||||||||||||||
seq2  GCATATGTGAATTC  1137