BAC Information

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BAC

Clone NameB6Ng01-008N01
Chromosome16 (Build37)
Map Location 56,076,544 - 56,187,961
singlet/doubletdoublet
Overlap geneSenp7
Upstream geneLOC436421, Zpld1, Nfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1
Downstream geneImpg2, LOC672835, Abi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008N01.bB6Ng01-008N01.g
ACCDH844945DH844946
length1,0301,049
definitionDH844945|Mus musculus domesticus DNA, BAC clone: B6Ng01-008N01, 5' end.DH844946|Mus musculus domesticus DNA, BAC clone: B6Ng01-008N01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,076,544 - 56,077,582)(56,186,912 - 56,187,961)
sequence
gaattcattgagttgtttttgttttcttttctttttctgtttttgagaaa
aggtctccctgtgtaactcaagatggggtcatattcctattccccctgat
tacctcttctgaatggtggggttacaggcgacccccccccactttttcct
ctttctgtttttttgagacagagtttctctgtgtactcctggctatcctg
gaactcaatttgtagacctggctggcctcccaactcagagatatgcctgc
ttttgcctcccatgtcctggggtgttaaaggcttgcaccactaccaactg
agctcaacccattgtaaactttctcattatacggtttattttggtagagt
tagactcagcagttccaaatctatttaggtatgcccggtggcaatgtgtc
taaagctcttaaggctatgagcacagatctctgaggactcggtttgacag
agttgaactcccaagatctcttcatatgcaatcaattttatcaatatttt
tgtctttttttttttttttttgaggaatggtcgtcctcttgcagccttgg
agctcaggggtctcctgcgtcagacttttcccgtgctaggattttaggtg
tgttgctaccacgcctagccttttcccactgcgtattttaaagatactag
ctgttctttgcctttgaaatcatatttatgcaagacataaaggtgttttt
atatgcatgtctctactgatgagtttttgttttaatattcctgctccctg
gggtcaagtaaaattgacatactagaaaaatgcagtatctagtatcattt
ggggagtttttggatggagaacttcaggtgtgatcataatctcagtttaa
gatgcacagtttcctttcttaataaatacgttccatctcagcttggtgca
tttatacgtgttagtgtgttatattagatattagccttttctatccgttg
gcagaatctgtgccctcacccggttaaatcacttatatagtttattgatg
aaatgctttagaaatgctttttgagggctg
gaattccagagttggaagcatgaaaagtcccactaaaggctgtcctttag
gggagaacacagcttccagaacaactacgtttccataaggttaatttagt
ggcaaagttgagctacaactacaatgtcatttctcctgtttaacttgtgt
ttaactgctctggttgccatagaaggctaccttagactgtgctgtgtaaa
aggctagcacaatgccttgcatctcaaagcaggatagaagaacaaacggg
ctgccgtggaacatcagggtggacttactgactgacggtgaccctagggg
ccagtgcctgagtgatggactgatatttttgttagaatttgtattgcttt
cattatggaaatccagtagttcttcaagcctatagtgcacaaatgtacaa
gatacgggtttagaacttttagccaccttctcctaggaattttatattgt
gatcctgtacttaaaatgtattctattgactgagacgaccttaaatggaa
ttaaataacaaagtcagaatatgtcactaacaaggcccactgcatactat
aaacttcaaatcaaaatcaactagaaaacaatactagagggtcaaaactg
tcacaattaatgaagttccagtgtggaagaaaaaggagtctaagcacaat
gtaacaattacacgatggtttctctaaccatcttttactatgcagtgtca
tcccacacccacaccattaccccaacattaaaagtcccaagtgcagacaa
gaattctgtaaatagacttctggtcaaggcctgtcttcataagagacggt
gctagtgacagcactaagccctggctcctgccatttaaagatctgtcttt
aatgttgctacacgccatacagtgtctattggattagaaaataacggcca
tgcttctagttgtgcttctagttgttgtttcctcacctattgtgctctga
gagacttaagtaaatggggtcttttgcataaggattttttttcctttttg
cattttattctgccaccactcactagccctaaggactccaattagtaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_56076544_56077582
seq2: B6Ng01-008N01.b_46_1075

seq1  GAATTCATTGAGTTGTTTTTGTTTTCTTTTCTTTTTCTGTTTTTGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAGTTGTTTTTGTTTTCTTTTCTTTTTCTGTTTTTGAGAAA  50

seq1  AGGTCTCCCTGTGTAACTCAAGATGGGGTCATATTCCTATTCCCCCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTCCCTGTGTAACTCAAGATGGGGTCATATTCCTATTCCCCCTGAT  100

seq1  TACCTCTTCTGAATGGTGGGGTTACAGGCGACCCCCCCCCACTTTTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTTCTGAATGGTGGGGTTACAGGCGACCCCCCCCCACTTTTTCCT  150

seq1  CTTTCTGTTTTTTTGAGACAGAGTTTCTCTGTGTACTCCTGGCTATCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTTTTTTTGAGACAGAGTTTCTCTGTGTACTCCTGGCTATCCTG  200

seq1  GAACTCAATTTGTAGACCTGGCTGGCCTCCCAACTCAGAGATATGCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAATTTGTAGACCTGGCTGGCCTCCCAACTCAGAGATATGCCTGC  250

seq1  TTTTGCCTCCCATGTCCTGGGGTGTTAAAGGCTTGCACCACTACCAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCTCCCATGTCCTGGGGTGTTAAAGGCTTGCACCACTACCAACTG  300

seq1  AGCTCAACCCATTGTAAACTTTCTCATTATACGGTTTATTTTGGTAGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAACCCATTGTAAACTTTCTCATTATACGGTTTATTTTGGTAGAGT  350

seq1  TAGACTCAGCAGTTCCAAATCTATTTAGGTATGCCCGGTGGCAATGTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCAGCAGTTCCAAATCTATTTAGGTATGCCCGGTGGCAATGTGTC  400

seq1  TAAAGCTCTTAAGGCTATGAGCACAGATCTCTGAGGACTCGGTTTGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCTCTTAAGGCTATGAGCACAGATCTCTGAGGACTCGGTTTGACAG  450

seq1  AGTTGAACTCCCAAGATCTCTTCATATGCAATCAATTTTATCAATATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAACTCCCAAGATCTCTTCATATGCAATCAATTTTATCAATATTTT  500

seq1  TGTCTTTTTTTTTTTTTTTTTGAGGAATGGTCGTCCTCTTGCAGCCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTTTTTTTTTTTTTTGAGGAATGGTCGTCCTCTTGCAGCCTTGG  550

seq1  AGCTCAGGGGTCTCCTGCGTCAGACTTTTCCCGTGCTAGGATTTTAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGGGGTCTCCTGCGTCAGACTTTTCCCGTGCTAGGATTTTAGGTG  600

seq1  TGTTGCTACCACGCCTAGCCTTTTCCCACTGCGTATTTTAAAGATACTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTACCACGCCTAGCCTTTTCCCACTGCGTATTTTAAAGATACTAG  650

seq1  CTGTTCTTTGCCTTTGAAATCATATTTATGCAAGACATAAAGGTGTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTTTGCCTTTGAAATCATATTTATGCAAGACATAAAGGTGTTTTT  700

seq1  ATATGCATGTCTCTACTGATGAGTTTTTGTTTTAATATTCCTGCTCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATGTCTCTACTGATGAGTTTTTGTTTTAATATTCCTGCTCCCTG  750

seq1  GGGTCAAGTAAAATTGACATACTAGAAAAATGCAGTATCTAGTATCATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAAGTAAAATTGACATACTAGAAAAATGCAGTATCTAGTATCATTT  800

seq1  -GGGAGTTTTTGGATGGAGAACTTCAGGTGTGATCATAATCTCAGTTTAA  849
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGTTTTTGGATGGAGAACTTCAGGTGTGATCATAATCTCAGTTTAA  850

seq1  GATGCACAGTT--CCTTCTTAATAAATACGTTCCATCTCAGCTTGGTGCA  897
      |||||||||||  | |||||||||||||||||||||||||||||||||||
seq2  GATGCACAGTTTCCTTTCTTAATAAATACGTTCCATCTCAGCTTGGTGCA  900

seq1  TTTATACGTGTTAGTGTGTTATATTAAGATATTAGCCTTTTCTATCCGTT  947
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTATACGTGTTAGTGTGTTATATT-AGATATTAGCCTTTTCTATCCGTT  949

seq1  GGCAGAATCTGTGCCCCTCACCCGGTTATATTCACTTATTATAGTTTATT  997
      ||||||||||||| |||||||||||||| | ||||||| ||||||||| |
seq2  GGCAGAATCTGTG-CCCTCACCCGGTTA-AATCACTTA-TATAGTTTA-T  995

seq1  TGATGGATATGCTTTTTAGAAATATGCTTTTTTGAAGGGCTG  1039
      |||| || ||||  |||||||  |||||||||   |||||||
seq2  TGAT-GAAATGC--TTTAGAA--ATGCTTTTT--GAGGGCTG  1030

seq1: chr16_56186912_56187961
seq2: B6Ng01-008N01.g_67_1115 (reverse)

seq1  TTTACATAATTGGAGTCCTAGAGGCTTAGTGAAGTGGT-GCAG-ATAAAA  48
      ||||| |||||||||||||  |||  ||||| |||||| |||| ||||||
seq2  TTTAC-TAATTGGAGTCCT-TAGGGCTAGTG-AGTGGTGGCAGAATAAAA  47

seq1  TACAAAAAGAAAAAAAATTCCTTATGCAAAAGA-CCCATTTACTTAAGTC  97
      | ||||||| ||||||| ||||||||||||||| ||||||||||||||||
seq2  TGCAAAAAGGAAAAAAAATCCTTATGCAAAAGACCCCATTTACTTAAGTC  97

seq1  TCTCAGAGCACCATAGCTGAGGAAAC-ACAACTAGAAGCACAACTAGAAG  146
      ||||||||||| |||| ||||||||| |||||||||||||||||||||||
seq2  TCTCAGAGCACAATAGGTGAGGAAACAACAACTAGAAGCACAACTAGAAG  147

seq1  CATGGCCGTTATTTTCTAATCC-ATAGACACTGTATTGGCGTGTAGCAAC  195
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  CATGGCCGTTATTTTCTAATCCAATAGACACTGTA-TGGCGTGTAGCAAC  196

seq1  ATTAAAGACAGATCTTTAAATGGCAGGGAGCCAAGGCTTAGTGCTGTCAC  245
      ||||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  ATTAAAGACAGATCTTTAAATGGCA-GGAGCCAGGGCTTAGTGCTGTCAC  245

seq1  TAGCACCGTCTCTTATGAAGACAGGCCTTTGACCAGAAGTCTATTTACAG  295
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TAGCACCGTCTCTTATGAAGACAGGCC-TTGACCAGAAGTCTATTTACAG  294

seq1  AATTCTTGTCTGCACTTGGGACTTTTAATGTTGGGGTAATGGTGTGGGTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTGTCTGCACTTGGGACTTTTAATGTTGGGGTAATGGTGTGGGTG  344

seq1  TGGGATGACACTGCATAGTAAAAGATGGTTAGAGAAACCATCGTGTAATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGACACTGCATAGTAAAAGATGGTTAGAGAAACCATCGTGTAATT  394

seq1  GTTACATTGTGCTTAGACTCCTTTTTCTTCCACACTGGAACTTCATTAAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACATTGTGCTTAGACTCCTTTTTCTTCCACACTGGAACTTCATTAAT  444

seq1  TGTGACAGTTTTGACCCTCTAGTATTGTTTTCTAGTTGATTTTGATTTGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAGTTTTGACCCTCTAGTATTGTTTTCTAGTTGATTTTGATTTGA  494

seq1  AGTTTATAGTATGCAGTGGGCCTTGTTAGTGACATATTCTGACTTTGTTA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATAGTATGCAGTGGGCCTTGTTAGTGACATATTCTGACTTTGTTA  544

seq1  TTTAATTCCATTTAAGGTCGTCTCAGTCAATAGAATACATTTTAAGTACA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTCCATTTAAGGTCGTCTCAGTCAATAGAATACATTTTAAGTACA  594

seq1  GGATCACAATATAAAATTCCTAGGAGAAGGTGGCTAAAAGTTCTAAACCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCACAATATAAAATTCCTAGGAGAAGGTGGCTAAAAGTTCTAAACCC  644

seq1  GTATCTTGTACATTTGTGCACTATAGGCTTGAAGAACTACTGGATTTCCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTGTACATTTGTGCACTATAGGCTTGAAGAACTACTGGATTTCCA  694

seq1  TAATGAAAGCAATACAAATTCTAACAAAAATATCAGTCCATCACTCAGGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAAGCAATACAAATTCTAACAAAAATATCAGTCCATCACTCAGGC  744

seq1  ACTGGCCCCTAGGGTCACCGTCAGTCAGTAAGTCCACCCTGATGTTCCAC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCCCTAGGGTCACCGTCAGTCAGTAAGTCCACCCTGATGTTCCAC  794

seq1  GGCAGCCCGTTTGTTCTTCTATCCTGCTTTGAGATGCAAGGCATTGTGCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCCGTTTGTTCTTCTATCCTGCTTTGAGATGCAAGGCATTGTGCT  844

seq1  AGCCTTTTACACAGCACAGTCTAAGGTAGCCTTCTATGGCAACCAGAGCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTTACACAGCACAGTCTAAGGTAGCCTTCTATGGCAACCAGAGCA  894

seq1  GTTAAACACAAGTTAAACAGGAGAAATGACATTGTAGTTGTAGCTCAACT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAACACAAGTTAAACAGGAGAAATGACATTGTAGTTGTAGCTCAACT  944

seq1  TTGCCACTAAATTAACCTTATGGAAACGTAGTTGTTCTGGAAGCTGTGTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACTAAATTAACCTTATGGAAACGTAGTTGTTCTGGAAGCTGTGTT  994

seq1  CTCCCCTAAAGGACAGCCTTTAGTGGGACTTTTCATGCTTCCAACTCTGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTAAAGGACAGCCTTTAGTGGGACTTTTCATGCTTCCAACTCTGG  1044

seq1  AATTC  1050
      |||||
seq2  AATTC  1049