BAC Information

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BAC

Clone NameB6Ng01-008P01
Chromosome16 (Build37)
Map Location 76,768,503 - 76,899,864
singlet/doubletdoublet
Overlap gene1700063K16Rik
Upstream geneLOC546667, Samsn1, 4930578N18Rik, LOC100039457, Nrip1, LOC100039316
Downstream geneLOC665120, Usp25, 2810055G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008P01.bB6Ng01-008P01.g
ACCDH845025DH845026
length8361,023
definitionDH845025|Mus musculus domesticus DNA, BAC clone: B6Ng01-008P01, 5' end.DH845026|Mus musculus domesticus DNA, BAC clone: B6Ng01-008P01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,768,503 - 76,769,356)(76,898,834 - 76,899,864)
sequence
gaattcactctttgtaagctttaaatgaagaaatgttaatggcggcaacg
ctcttgatggagacccgggcacagtttcaagacttaccctggctctggca
acattggccacctcttagatgaaggggcgagggaacattaccggaacacc
gttagaagtgtgatggagaaaagagtttccaggtgcagctttggaggttt
aaagcagccacacaagatgcagagctaacacaggggaggaacagaaaatt
catatcatggcttcttgtgccttcagttcatcgatcatctgccagtttat
cccaggggccacaagtaatcagtaacctgctagcaggtttaggattgcag
aggcttcctgaggcacagaacagagaagatgccacctctgagggagaatt
tggagtggagagaaaggcatacccaacatcaaacttcctctttgattaag
gagtaagatgaactcaacatagggtctgtatacaaaccggctttgggaga
gacaagtgctatagacagaatggtcttgcccttagctcctacactgagtg
tgactgccccctggagacgaggttcactagggtgtgcggaacagcatgtt
gtttctgaaatccacgacatgggttttattcttgtgaagtattaagatga
ttgaagcttaattgcatgttgttgggaggcagaattcggggattgactac
gaacagagcgtatcgtcaggatggagctgtcgcaattcaatattggtgac
tttttaagaagagggagggaaggagaaaaggaaacacacagtcttagaca
gacagacaggcagacagacagacacacacactcaca
gaattctcagtggtaactacaaagtgttctaaaaacctaaaaactaacaa
aaaacagcaacaaacaagccatatatggaaattaatacgaaattcataat
tgctgtgttcaacttcttttcatgtcttaaaaaattttaaagcctccaat
actaacgtttaacattcctttttttttttttttttttttggtcgcacata
gagggctgaattcaatccatgtatggactagatgttgactcctgtttaca
gtaattaacaaaacaaaactttcccctcccatgtactaccactcttggac
acaagatggcaatcgtagtccgtgaaatctacagtgattttttttttttt
tttttttttctttcttttccttttccttttcccctggggggaacaatttc
ttggaaaaagttgaagtgacattaaaaaaacaaagataaatgatcaaagc
tatgacgtgaataattaaatagctaaattccaccgcctgatctcggaaac
attttgctttgcttcctggggcttagatgtttttatgggattggctactt
tccttcagcctgcaccaaattgattttaggcacattgctatatgtcttta
agtttttattttttaaatctgtaaatacaataacaatatggcataaccgt
acaatgttgtaaatcagatgttatttgtaaatgatataggctagctattt
cttaatcggcactaactaataataaagtaggttgatggttagattaagaa
cgttggcaaacgtgaaaaagtttaaatgggaaggttaggctttgacttta
aagaagacagagaaaaaaaatgcaaagggcagatgaggaggatacctaaa
aataaataataaaaatgttgcaaaaaaggcatgacgaagcttgccaaata
cttcccccatactctaaacatgcctgacagtgtgagtggacatcatcaca
aggatgggtccaaagaaaagtcaatgacctccctgtggttaagtttccat
tccttaaactaggtgtaaataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_76768503_76769356
seq2: B6Ng01-008P01.b_43_878

seq1  GAATTCACTCTTTGTAAGCTTTAAATGAAGAAATGTTAATGGCGGCAACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTTTGTAAGCTTTAAATGAAGAAATGTTAATGGCGGCAACG  50

seq1  CTCTTGATGGAGACCCGGGCACAGTTTCAAGACTTACCCTGGCTCTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGATGGAGACCCGGGCACAGTTTCAAGACTTACCCTGGCTCTGGCA  100

seq1  ACATTGGCCACCTCTTAGATGAAGGGGCGAGGGAACATTACCGGAACACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGGCCACCTCTTAGATGAAGGGGCGAGGGAACATTACCGGAACACC  150

seq1  GTTAGAAGTGTGATGGAGAAAAGAGTTTCCAGGTGCAGCTTTGGAGGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAGTGTGATGGAGAAAAGAGTTTCCAGGTGCAGCTTTGGAGGTTT  200

seq1  AAAGCAGCCACACAAGATGCAGAGCTAACACAGGGGAGGAACAGAAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCCACACAAGATGCAGAGCTAACACAGGGGAGGAACAGAAAATT  250

seq1  CATATCATGGCTTCTTGTGCCTTCAGTTCATCGATCATCTGCCAGTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCATGGCTTCTTGTGCCTTCAGTTCATCGATCATCTGCCAGTTTAT  300

seq1  CCCAGGGGCCACAAGTAATCAGTAACCTGCTAGCAGGTTTAGGATTGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGGCCACAAGTAATCAGTAACCTGCTAGCAGGTTTAGGATTGCAG  350

seq1  AGGCTTCCTGAGGCACAGAACAGAGAAGATGCCACCTCTGAGGGAGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCCTGAGGCACAGAACAGAGAAGATGCCACCTCTGAGGGAGAATT  400

seq1  TGGAGTGGAGAGAAAGGCATACCCAACATCAAACTTCCTCTTTGATTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTGGAGAGAAAGGCATACCCAACATCAAACTTCCTCTTTGATTAAG  450

seq1  GAGTAAGATGAACTCAACATAGGGTCTGTATACAAACCGGCTTTGGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGATGAACTCAACATAGGGTCTGTATACAAACCGGCTTTGGGAGA  500

seq1  GACAAGTGCTATAGACAGAATGGTCTTGCCCTTAGCTCCTACACTGAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTGCTATAGACAGAATGGTCTTGCCCTTAGCTCCTACACTGAGTG  550

seq1  TGACTGCCCCCTGGAGACGAGGTTCACTAGGGTGTGCGGAACAGCATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGCCCCCTGGAGACGAGGTTCACTAGGGTGTGCGGAACAGCATGTT  600

seq1  GTTTCTGAAATCCACGACATGGGTTTTATTCTTGTGAAGTATTAAGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGAAATCCACGACATGGGTTTTATTCTTGTGAAGTATTAAGATGA  650

seq1  TTGAAGCTTAATTGCATGTTGTTGGGAGGCAGAATTCGGGGATTGACTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCTTAATTGCATGTTGTTGGGAGGCAGAATTCGGGGATTGACTAC  700

seq1  GAACAGAGCGTATCGTCAGGATGGAGCTGTCGCAATTCAATATTGGTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAGCGTATCGTCAGGATGGAGCTGTCGCAATTCAATATTGGTGAC  750

seq1  TTTTAAAGAAGAGGGAGGGAAGGAGAAAAGGAAACACACAGTCTTAGACA  800
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGAAGAGGGAGGGAAGGAGAAAAGGAAACACACAGTCTTAGACA  800

seq1  GACAGACAGGCAGACAGACAGACACACACACACACACACACACACACACT  850
      ||||||||||||||||||||||||||||||| ||||              
seq2  GACAGACAGGCAGACAGACAGACACACACACTCACA--------------  836

seq1  CACA  854
          
seq2  ----  836

seq1: chr16_76898834_76899864
seq2: B6Ng01-008P01.g_69_1091 (reverse)

seq1  TGTATTTACACACAAGTTTAAGGAATGGAAACTTAACCACTGGGAGGTCA  50
      ||||||||||| | |||||||||||||||||||||||||| |||||||||
seq2  TGTATTTACAC-CTAGTTTAAGGAATGGAAACTTAACCACAGGGAGGTCA  49

seq1  -TGACTCTTCTTTGGACCCATCC-TGTGATGATGTCCACTCACACTGTCA  98
       ||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  TTGACTTTTCTTTGGACCCATCCTTGTGATGATGTCCACTCACACTGTCA  99

seq1  GGCATGTCTTAGAGCTATGGGGTGAGGTATTTGGGCAAGCTTCGTCATGC  148
      ||||||| |||||| ||||||| || |||||| |||||||||||||||||
seq2  GGCATGT-TTAGAG-TATGGGG-GAAGTATTT-GGCAAGCTTCGTCATGC  145

seq1  CTTTTTTGCAACATTTTTTATTTATTTATTTTTTAGGTATCCTCCTCATC  198
      ||||||||||||||||||   ||||||| |||||||||||||||||||||
seq2  CTTTTTTGCAACATTTTT--ATTATTTA-TTTTTAGGTATCCTCCTCATC  192

seq1  TGCCCTTTGCACTTCTTTTTCTCTGTCCTTCTTTAAAGTCAAAGCCTAAC  248
      ||||||||||| || ||||||||||| |||||||||||||||||||||||
seq2  TGCCCTTTGCA-TTTTTTTTCTCTGT-CTTCTTTAAAGTCAAAGCCTAAC  240

seq1  CTTCCCATTTAAACTCTTTCACGTTTGCCAACGTTCTTAATCTAACCATC  298
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTTCCCATTTAAACTTTTTCACGTTTGCCAACGTTCTTAATCTAACCATC  290

seq1  AACCTACTTTATTATTAGTTAGTGCCGATTAAGAAATAGCTAGCCTATAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACTTTATTATTAGTTAGTGCCGATTAAGAAATAGCTAGCCTATAT  340

seq1  CATTTACAAATAACATCTGATTTACAACATTGTACGGTTATGCCATATTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACAAATAACATCTGATTTACAACATTGTACGGTTATGCCATATTG  390

seq1  TTATTGTATTTACAGATTTAAAAAATAAAAACTTAAAGACATATAGCAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTATTTACAGATTTAAAAAATAAAAACTTAAAGACATATAGCAAT  440

seq1  GTGCCTAAAATCAATTTGGTGCAGGCTGAAGGAAAGTAGCCAATCCCATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTAAAATCAATTTGGTGCAGGCTGAAGGAAAGTAGCCAATCCCATA  490

seq1  AAAACATCTAAGCCCCAGGAAGCAAAGCAAAATGTCTCCGAGATCAGGCG  548
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAACATCTAAGCCCCAGGAAGCAAAGCAAAATGTTTCCGAGATCAGGCG  540

seq1  GTGGAATTTAGCTATTTAATTATTCACGTCATAGCTTTGATCATTTATCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATTTAGCTATTTAATTATTCACGTCATAGCTTTGATCATTTATCT  590

seq1  TTGTTTTTTTAATGTCACTTCAACTTTCTCCAAGAAATTGTTCCACACAG  648
      ||||||||||||||||||||||||||| |||||||||||||||| | |||
seq2  TTGTTTTTTTAATGTCACTTCAACTTTTTCCAAGAAATTGTTCCCCCCAG  640

seq1  AGGAAAAGGAAAAGGAAAAGAAAGAAAAAAAAAAAAAAAAAAAAAATCAC  698
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAGGAAAAGGAAAAGAAAGAAAAAAAAAAAAAAAAAAAAAATCAC  690

seq1  TGTAGATTTCACGGACTACGATTGCCATCTTGTGTCCAAGAGTGGTAGTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATTTCACGGACTACGATTGCCATCTTGTGTCCAAGAGTGGTAGTA  740

seq1  CATGGGAGGGGAAAGTTTTGTTTTGTTAATTACTGTAAACAGGAGTCAAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAGGGGAAAGTTTTGTTTTGTTAATTACTGTAAACAGGAGTCAAC  790

seq1  ATCTAGTCCATACATGGATTGAATTCAGCCCTCTATGTGCGACCAAAAAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTCCATACATGGATTGAATTCAGCCCTCTATGTGCGACCAAAAAA  840

seq1  AAAAAAAAAAAAAAAGGAATGTTAAACGTTAGTATTGGAGGCTTTAAAAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAGGAATGTTAAACGTTAGTATTGGAGGCTTTAAAAT  890

seq1  TTTTTAAGACATGAAAAGAAGTTGAACACAGCAATTATGAATTTCGTATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAGACATGAAAAGAAGTTGAACACAGCAATTATGAATTTCGTATT  940

seq1  AATTTCCATATATGGCTTGTTTGTTGCTGTTTTTTGTTAGTTTTTAGGTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCATATATGGCTTGTTTGTTGCTGTTTTTTGTTAGTTTTTAGGTT  990

seq1  TTTAGAACACTTTGTAGTTACCACTGAGAATTC  1031
      |||||||||||||||||||||||||||||||||
seq2  TTTAGAACACTTTGTAGTTACCACTGAGAATTC  1023