BAC Information

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BAC

Clone NameB6Ng01-010L10
Chromosome16 (Build37)
Map Location 59,762,660 - 59,763,152
singlet/doubletsinglet
Overlap geneEpha6
Upstream geneOlfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6
Downstream geneLOC100043804, EG668168, LOC668170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010L10.bB6Ng01-010L10.g
ACCDH846302DH846303
length1,067486
definitionDH846302|Mus musculus domesticus DNA, BAC clone: B6Ng01-010L10, 5' end.DH846303|Mus musculus domesticus DNA, BAC clone: B6Ng01-010L10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgcactaaacccatctggtcctgggattttttggttgggagat
ttttaatgactgctgctatgtctttaggggttatgggattgtttatatgg
aatcctggtaactttggtacctggtatctgtctagaatattgtccatttc
atccaggttttccagctttgttgaatataggcttttgtagtaggatctga
tgatttcctcaggatctgttgttatgtctcccttttcagttctgatttta
tttatttatatactgtctctgtgccctctgattagtctggctaaggggtt
tatctatcttgttgattttctcaaagaaccagctcctggttttgttgatt
cttggtatagtactttttgcttctattgaggaaacccaaatggtcaagaa
gcacctaaagaaacgttcaacatccttagtcatcagggaaatgcaaatca
aaacaaccctgagatgccacctcacaccagtcagaatcactaagatcaaa
aactcaggtgacagcagatgctggtgaggatgtggagaaagaggaacact
cctccatttttggtgggattgaaagatggtacaaccactctggagtcagt
ctggtggttcctcagaaaattggacatagtattacccagctataccactc
ctggatatatatccaaaagatgctaaaacatataacaaggacacgtgctc
cattatgttcatagcagccttatttataatagccagaagctggaaagaac
ccagatgtccttcaacagagaaatggatacagaaaatgtggtacatttta
cacaatggagtactactcacctatttaaaaacaatgaattcatgaaattc
ttaggcaaatggatgaaaccagaaaataccatcctgagtgaggtaactca
tcacaaagaacacacatggtatacactcactgataagtggatattagccc
aaagcttgaatacccaagatacaattccacagaccacatgaagctcagaa
gaaggaaaaccaaaatgtgggtgcgtgggtcctcctagaagagaacaaat
attcccgggaccaatat
agtgtcagagaaagaagtggaaattttagtgtaactacaggcaaaaacca
ctgaacatttgacagaaaagatgatagaattgatgctctaagagctacct
gtgcctggcatgttgaaaagaatgtataaaggaacaaggaaagatatagg
gaagatgcttgattcagaactggtacttggtataaatcagtgtaaaccca
aagattggagaagggcaggcagccttggggaacaaaatctctgagaaaag
aaaaaaggcaggcaaaatagatactgtcctgataatttgtggagtgtgtg
tatgtgtgtgcgtgtgtatgtgtgtgtgtgtgtgctttgctttgcttttt
ataagttaagaaattgaagtgctggagagatggttcagaggttaagagga
ctgactgctcttccacatgtcctgagttcaaattctagcatccacaaact
ggcttacaaccatctgtaatgggatttgaatactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_59762660_59763152
seq2: B6Ng01-010L10.g_67_558 (reverse)

seq1  AGAGTATATCAGATCCCATTACAGATGGTTGTAAGCCACTGTGTGGTTGC  50
      ||||||| ||| |||||||||||||||||||||||||| | ||||| |||
seq2  AGAGTAT-TCAAATCCCATTACAGATGGTTGTAAGCCAGTTTGTGGATGC  49

seq1  TGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTACTCTTAACCTC  100
      | | | ||||||||||||| | |||||||||||||||| |||||||||||
seq2  TAGAATTTGAACTCAGGACATGTGGAAGAGCAGTCAGTCCTCTTAACCTC  99

seq1  TGAACCATCTCTCCAGCACTTCAATTTCTTAACTTATAAAAAGCAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCATCTCTCCAGCACTTCAATTTCTTAACTTATAAAAAGCAAAGCA  149

seq1  AAGCACACACACACACACATACACACGCACACACATACACACACTCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACACACACACACACATACACACGCACACACATACACACACTCCACA  199

seq1  AATTATCAGGACAGTATCTATTTTGCCTGCCTTTTTTCTTTTCTCAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCAGGACAGTATCTATTTTGCCTGCCTTTTTTCTTTTCTCAGAGA  249

seq1  TTTTGTTCCCCAAGGCTGCCTGCCCTTCTCCAATCTTTGGGTTTACACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCCCCAAGGCTGCCTGCCCTTCTCCAATCTTTGGGTTTACACTG  299

seq1  ATTTATACCAAGTACCAGTTCTGAATCAAGCATCTTCCCTATATCTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATACCAAGTACCAGTTCTGAATCAAGCATCTTCCCTATATCTTTCC  349

seq1  TTGTTCCTTTATACATTCTTTTCAACATGCCAGGCACAGGTAGCTCTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTTTATACATTCTTTTCAACATGCCAGGCACAGGTAGCTCTTAG  399

seq1  AGCATCAATTCTATCATCTTTTCTGTCAAATGTTCAGTGGTTTTTGCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAATTCTATCATCTTTTCTGTCAAATGTTCAGTGGTTTTTGCCTG  449

seq1  TAGTTACACTAAAATTTCCACTTCTTTCTCTGACACTGAATTC  493
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACACTAAAATTTCCACTTCTTTCTCTGACACTGAATTC  492