BAC Information

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BAC

Clone NameB6Ng01-011B11
Chromosome16 (Build37)
Map Location 70,311,576 - 70,452,461
singlet/doubletdoublet
Overlap geneGbe1
Upstream geneSpeer2, EG664930
Downstream geneD16Ertd519e, LOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011B11.bB6Ng01-011B11.g
ACCDH846574DH846575
length1,1801,097
definitionDH846574|Mus musculus domesticus DNA, BAC clone: B6Ng01-011B11, 5' end.DH846575|Mus musculus domesticus DNA, BAC clone: B6Ng01-011B11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,451,275 - 70,452,461)(70,311,576 - 70,312,669)
sequence
gaattcaacacaaacgcaagaattgctggaaaattgagaaacttctttcg
tcatatcaccatttgggaagaaactgaaactgaagaaatgagaaactcta
accaaattacatgccacattagcaatgttttctccacaactgctaccata
atttccctatgattctatcatatttataaaacgtaaataaataataggtg
tttaaaattcataaacatcatttttcattatttatctaggctacatatcc
cctcaatgaaatcccgaactttttaaatatgcatgacggagaacaagtgc
cgtactatgacttgaagcggagtatgttggtaaattatttatttcatgtt
taaccagaatgactgaatcattctttctaaatcacagatgtctgggtcat
ttgccagagaaaaaaacagaatgccaaaacaattaaatttatatgtttgc
tgactgacaaattggtgttttctaggctggctgttctataaaactgctgc
aggctaagggttaataaatgtcagtggacattttgttcacgttctatgtt
catcatcaatttcctgagaaattgaaatttagtgttttataaagcacgta
ctttcatgctctgagtccacagctactaaatttattgaaaaataaaatgg
catttcattcaactagctcaataaattgatgggtatttacccaatctaat
caattacaaagccattaccgcaaaagccttcagggtacttgctcaaatgt
actaatgtgtcatacaacacaatgcacatggggctactaagcccttagca
gtaggttagggtgactactaaaatggattcagaaatgctttctttatatt
gctatcaattgaaattcaagaactgacacccaagtttcactactgcaaaa
cttaggaatgcttggaacaacaaagatgtatgattcatactttcaatgta
aataatttacttttaaatacacacatatacatgtgtgtatatgcatatgt
aaatacaaaaaataaaggatatgaatatatatatttttgtagcttaaata
ttgaaaatatttgtatatgcatagttagtgaagcaaaataagttgtctgc
taattccctatgcttttaccaggcgactaatattttcattcacttacggt
atattttatcttaagcaggtcacccactgc
gaattccacatcttcactccatcatcctctcaatcttagttcatcacctt
ctctctttggtatcactgctgtctcctaattctctactttctgttcttcc
gaaccatttggatgagagaggttttttttttttttttttcattttaaata
gttcaaatgttttgtatttgtttgctttacatctcaataccaacctccat
ttctcccagtaccctctcacacagaccctcctcccttcctcctcggagaa
aggggagcctgtatcctgggtatcaccctccaccctggctcatcaagtca
ctgcaggattggatgcatccttggggagggtatttcagaccctcagtttt
ctcctcaaatccctctaactgtagatctgcgagagcaaacaggtcctcgg
cacttgctccgttcctggtactctgcttctctggacaccactgaggctag
tttcctctccctccttccctgtattcctctctgtcctgaatacctcaatt
ccccatttcagaaacactttgcctagacggctattcctccatggctgtgt
cttattgcggtacaacctaaatgccagcagcaaatgggattgcttgggca
ccagaaataaaagaggcgcatttgatcaataataataattccagtgttcc
agctccacccgaaatggacttatgtgataattacgacagtggaacttaaa
atcccatttagctgtgctatgtgggcaagaggctggtgtatgaaagttga
ggtaaactggggttcctgctcttataaagcttgcctttttaaagattaac
aaagagcttacattgtgttttactgtagcatagaaggagaatggggcttt
taagatcaggagatctcaatgatggctggaaagaaagtagcctacagaga
agcttaaggaagagatttctaaaaagagtagcaattgcagttgctcacag
aattctgtcagattctgaagggccatgcatcttcagtacagggacttgga
tagttgaaggtagtgactacaggttgtttagtgtttaaaggaaaggcacg
gtatacttccacacttaacgtgaaacgtctgcatttaatttttactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70451275_70452461
seq2: B6Ng01-011B11.b_44_1223 (reverse)

seq1  GCAGTGGTGTGACACTGCTTAAGAT-AAATATAACGTAAGTGACATGAAA  49
      ||||||| ||||| ||||||||||| ||||||| ||||||||| ||||||
seq2  GCAGTGG-GTGAC-CTGCTTAAGATAAAATATACCGTAAGTGA-ATGAAA  47

seq1  AAATTAATTAGTCGCTGTGTAAAAGCATAAGGGAAATAAGCAGAACAACT  99
      |     |||||||||   |||||||||||  || ||| ||||| ||||||
seq2  A----TATTAGTCGCCTGGTAAAAGCATA--GGGAATTAGCAG-ACAACT  90

seq1  TATTTTGCTTCACTAACTATGCATATACAAATATTTTCAATATTTAAGCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGCTTCACTAACTATGCATATACAAATATTTTCAATATTTAAGCT  140

seq1  AC-AAAATATATATATTCATATCCTTTATTTTTTGTATTTACATATGCAT  198
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATATATATATTCATATCCTTTATTTTTTGTATTTACATATGCAT  190

seq1  ATACACACATGTATATGTGTGTATTTAAAAGTAAATTATTTACATTGAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACATGTATATGTGTGTATTTAAAAGTAAATTATTTACATTGAAA  240

seq1  GTATGAATCATACATCTTTGTTGTTCCAAGCATTCCTAAGTTTTGCAGTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAATCATACATCTTTGTTGTTCCAAGCATTCCTAAGTTTTGCAGTA  290

seq1  GTG-AACTTGGGTGTCAGTTCTTGAATTTCAATTGATAGCAATATAAAGA  347
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACTTGGGTGTCAGTTCTTGAATTTCAATTGATAGCAATATAAAGA  340

seq1  AAGCATTTCTGAATCCATTTTAGTAGTCACCCTAACCTACTGCTAAGGGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATTTCTGAATCCATTTTAGTAGTCACCCTAACCTACTGCTAAGGGC  390

seq1  TTAGTAGCCCCATGTGCATTGTGTTGTATGACACATTAGTACATTTGAGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGCCCCATGTGCATTGTGTTGTATGACACATTAGTACATTTGAGC  440

seq1  AAGTACCCTGAAGGCTTTTGCGGTAATGGCTTTGTAATTGATTAGATTGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCCTGAAGGCTTTTGCGGTAATGGCTTTGTAATTGATTAGATTGG  490

seq1  GTAAATACCCATCAATTTATTGAGCTAGTTGAATGAAATGCCATTTTATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATACCCATCAATTTATTGAGCTAGTTGAATGAAATGCCATTTTATT  540

seq1  TTTCAATAAATTTAGTAGCTGTGGACTCAGAGCATGAAAGTACGTGCTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATAAATTTAGTAGCTGTGGACTCAGAGCATGAAAGTACGTGCTTT  590

seq1  ATAAAACACTAAATTTCAATTTCTCAGGAAATTGATGATGAACATAGAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACACTAAATTTCAATTTCTCAGGAAATTGATGATGAACATAGAAC  640

seq1  GTGAACAAAATGTCCACTGACATTTATTAACCCTTAGCCTGCAGCAGTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAAAATGTCCACTGACATTTATTAACCCTTAGCCTGCAGCAGTTT  690

seq1  TATAGAACAGCCAGCCTAGAAAACACCAATTTGTCAGTCAGCAAACATAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAACAGCCAGCCTAGAAAACACCAATTTGTCAGTCAGCAAACATAT  740

seq1  AAATTTAATTGTTTTGGCATTCTGTTTTTTTCTCTGGCAAATGACCCAGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAATTGTTTTGGCATTCTGTTTTTTTCTCTGGCAAATGACCCAGA  790

seq1  CATCTGTGATTTAGAAAGAATGATTCAGTCATTCTGGTTAAACATGAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTGATTTAGAAAGAATGATTCAGTCATTCTGGTTAAACATGAAAT  840

seq1  AAATAATTTACCAACATACTCCGCTTCAAGTCATAGTACGGCACTTGTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTTACCAACATACTCCGCTTCAAGTCATAGTACGGCACTTGTTC  890

seq1  TCCGTCATGCATATTTAAAAAGTTCGGGATTTCATTGAGGGGATATGTAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTCATGCATATTTAAAAAGTTCGGGATTTCATTGAGGGGATATGTAG  940

seq1  CCTAGATAAATAATGAAAAATGATGTTTATGAATTTTAAACACCTATTAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATAAATAATGAAAAATGATGTTTATGAATTTTAAACACCTATTAT  990

seq1  TTATTTACGTTTTATAAATATGATAGAATCATAGGGAAATTATGGTAGCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACGTTTTATAAATATGATAGAATCATAGGGAAATTATGGTAGCA  1040

seq1  GTTGTGGAGAAAACATTGCTAATGTGGCATGTAATTTGGTTAGAGTTTCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGGAGAAAACATTGCTAATGTGGCATGTAATTTGGTTAGAGTTTCT  1090

seq1  CATTTCTTCAGTTTCAGTTTCTTCCCAAATGGTGATATGACGAAAGAAGT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTCAGTTTCAGTTTCTTCCCAAATGGTGATATGACGAAAGAAGT  1140

seq1  TTCTCAATTTTCCAGCAATTCTTGCGTTTGTGTTGAATTC  1187
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAATTTTCCAGCAATTCTTGCGTTTGTGTTGAATTC  1180

seq1: chr16_70311576_70312669
seq2: B6Ng01-011B11.g_68_1164

seq1  GAATTCCACATCTTCACTCCATCATCCTCTCAATCTTAGTTCATCACCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATCTTCACTCCATCATCCTCTCAATCTTAGTTCATCACCTT  50

seq1  CTCTCTTTGGTATCACTGCTGTCTCCTAATTCTCTACTTTCTGTTCTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTGGTATCACTGCTGTCTCCTAATTCTCTACTTTCTGTTCTTCC  100

seq1  GAACCATTTGGATGAGAGAGGTTTTTTTTTTTTTTTTTTCATTTTAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATTTGGATGAGAGAGGTTTTTTTTTTTTTTTTTTCATTTTAAATA  150

seq1  GTTCAAATGTTTTGTATTTGTTTGCTTTACATCTCAATACCAACCTCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAATGTTTTGTATTTGTTTGCTTTACATCTCAATACCAACCTCCAT  200

seq1  TTCTCCCAGTACCCTCTCACACAGACCCTCCTCCCTTCCTCCTCGGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCAGTACCCTCTCACACAGACCCTCCTCCCTTCCTCCTCGGAGAA  250

seq1  AGGGGAGCCTGTATCCTGGGTATCACCCTCCACCCTGGCTCATCAAGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGCCTGTATCCTGGGTATCACCCTCCACCCTGGCTCATCAAGTCA  300

seq1  CTGCAGGATTGGATGCATCCTTGGGGAGGGTATTTCAGACCCTCAGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGGATTGGATGCATCCTTGGGGAGGGTATTTCAGACCCTCAGTTTT  350

seq1  CTCCTCAAATCCCTCTAACTGTAGATCTGCGAGAGCAAACAGGTCCTCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAAATCCCTCTAACTGTAGATCTGCGAGAGCAAACAGGTCCTCGG  400

seq1  CACTTGCTCCGTTCCTGGTACTCTGCTTCTCTGGACACCACTGAGGCTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCTCCGTTCCTGGTACTCTGCTTCTCTGGACACCACTGAGGCTAG  450

seq1  TTTCCTCTCCCTCCTTCCCTGTATTCCTCTCTGTCCTGAATACCTCAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTCCCTCCTTCCCTGTATTCCTCTCTGTCCTGAATACCTCAATT  500

seq1  CCCCATTTCAGAAACACTTTGCCTAGACGGCTATTCCTCCATGGCTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTTCAGAAACACTTTGCCTAGACGGCTATTCCTCCATGGCTGTGT  550

seq1  CTTATTGCGGTACAACCTAAATGCCAGCAGCAAATGGGATTGCTTGGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGCGGTACAACCTAAATGCCAGCAGCAAATGGGATTGCTTGGGCA  600

seq1  CCAGAAATAAAAGAGGCGCATTTGATCAATAATAATAATTCCAGTGTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATAAAAGAGGCGCATTTGATCAATAATAATAATTCCAGTGTTCC  650

seq1  AGCTCCACCCGAAATGGACTTATGTGATAATTACGACAGTGGAACTTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCACCCGAAATGGACTTATGTGATAATTACGACAGTGGAACTTAAA  700

seq1  ATCCCATTTAGCTGTGCTATGTGGGCAAGAGGCTGGTGTATGAAAGTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATTTAGCTGTGCTATGTGGGCAAGAGGCTGGTGTATGAAAGTTGA  750

seq1  GGTAAACT-GGGTTCCTGCTCTTATAAAGCTTGCC-TTTTAAAGATTAAC  798
      |||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  GGTAAACTGGGGTTCCTGCTCTTATAAAGCTTGCCTTTTTAAAGATTAAC  800

seq1  AAAGAGCTTACATTGTG-TTTACTGTAGCATAGAA-GAGAATGGGGCTTT  846
      ||||||||||||||||| ||||||||||||||||| ||||||||||||||
seq2  AAAGAGCTTACATTGTGTTTTACTGTAGCATAGAAGGAGAATGGGGCTTT  850

seq1  TAAGACCA-GAGATCTCAATGATGGCTGGAAAGAAAGTAGCC-ACAGAGA  894
      ||||| || ||||||||||||||||||||||||||||||||| |||||||
seq2  TAAGATCAGGAGATCTCAATGATGGCTGGAAAGAAAGTAGCCTACAGAGA  900

seq1  AGC-TAAGGAAGAGAATTCCCAAAAAGAGTAGCAATTGCAG-TGCTCACA  942
      ||| |||||||||| ||| | |||||||||||||||||||| ||||||||
seq2  AGCTTAAGGAAGAG-ATTTCTAAAAAGAGTAGCAATTGCAGTTGCTCACA  949

seq1  GAATTCTGTCAGATCCTGAAAGGGCCATGCCACTACAGTACAAGGGAACT  992
      |||||||||||||| ||| |||||||||||  || |||||| |||||  |
seq2  GAATTCTGTCAGATTCTG-AAGGGCCATGCATCTTCAGTAC-AGGGACTT  997

seq1  GGATAG-TGAAGGTAGTGACTACAGGTTGTTTAAGTGTTTTAAGGAAAGC  1041
      |||||| ||||||||||||||||||||||||| ||||||| |||||||| 
seq2  GGATAGTTGAAGGTAGTGACTACAGGTTGTTT-AGTGTTTAAAGGAAAGG  1046

seq1  CACGTTTATA-TTTCACACTTAA-GTGAAACGTCATGCCATTTAAATTTT  1089
      ||||  |||| || ||||||||| |||||||||| || ||||| ||||||
seq2  CACG-GTATACTTCCACACTTAACGTGAAACGTC-TG-CATTT-AATTTT  1092

seq1  TACTG  1094
      |||||
seq2  TACTG  1097