BAC Information

Click to search

BAC

Clone NameB6Ng01-012H04
Chromosome16 (Build37)
Map Location 67,808,367 - 67,923,269
singlet/doubletdoublet
Overlap genenone
Upstream geneCadm2, 9330155M09Rik
Downstream geneEG626609
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012H04.bB6Ng01-012H04.g
ACCDH847539DH847540
length9621,076
definitionDH847539|Mus musculus domesticus DNA, BAC clone: B6Ng01-012H04, 5' end.DH847540|Mus musculus domesticus DNA, BAC clone: B6Ng01-012H04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,922,691 - 67,923,269)(67,808,367 - 67,809,458)
sequence
gaattcacaaaacacactcttacattccagacacagcattaatttctcct
gctcttggttatggaacaataaggtatgtttttacctaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaatcgcacctttgtagtgaatcactgtagtggtaa
ataatgtgaaatgttgacttgcagatttccctataccaaatgctgtttca
tggcacaattaaaaacgcttcagttctattttatttatatatttactcac
tttacatccttatcattctcagagctcccagttctcccatcaaacagtcc
ctctcaccaagcaccgcactgttctatcagagtggaggctcccctgaccc
tggcacatcgagcctcagcatggataggagcatcctcttccactgaggcc
agacaaggcagtccagttagaggaacagattccacagacagacaacaggt
ttagggatgcccttgctctagatgttctgagacctgcatgaagacccgca
catctactatatatgtcaggcagggggctaggtccagcctgtgcaaactc
ttcatttgtggttcaatctttctgaactcctgagggttcaagttagtcga
ttctattggtcttcctgtgggcttcatataaccttctgaaccctcagtcc
ttcccctgactcttccgtaagagtcccgagctcggtctaatgtttgctgg
ttggtctctgcatctgttccagtcagcttctgtgtgtagcccctcagagg
acagttatgctaaggttcctgtttacaaaaaaaaaatgagaagtgtcatt
aatcgtgagagggattgttgctaactcatgcaacgggtctcaagtttgac
cagtttttgggtggtcattccctcagtctctgctccatctctctccctgc
atttcttggagataggacaaattggtcaaagttttgtagtgggtgtgtac
ttacccctctac
gaattctccatgaaccatgaaaaaataatctatcaaaaaactaagagagg
atgagagataaagagaaggaccatagatgtgctagcctactagtgagctc
actggttatggaaattcatttggtacttactgtttcaaaatagagagact
agatgaggagttacaactttctgcatccatcatctcacttttcacttatt
tggttttgagcagcaagcatctgcaaataatattttaatatcaaagttga
aatattgtttcacttctctgattgtgatgctttgaaaaaggatttttatc
tttttcatgtatgcactttggaagaagacagcaatataaccctgacttcc
aatttgtctcagatattattttgtctaactcacatgaaaagaccataata
tttctgtgcttttataattgatactatgaattgatagtgggttttttttt
tttttgagtgttgtctctctaatccatctataatggtatctttgtagtta
agagattacttttaataggaaaacaaaataccttcagccaaatttctcct
gaaccctgcccaccctgtatgtatctcttgtcagacaatgtgaagtacat
atggttccatatccatttgttgctgggtcagctgcctactaggccacata
tttacaaagtgtgagtttgactttgactgtgtttcttccctttattttct
agaaagttatgttataagaacattgttgctcagtttcactttctgcttcc
ctcccctcatttgagtttctgaattctaatcatccttacaaaatgcatca
actcatttcatttttcatccaatacctgagggcatcctgatacagtactt
tggaagtcatgtactaaatgcaattttcccctgttaatagtgttctttac
cttccaagttttcaggactcccgttacatgtacatttgtctcagatatag
ttattaacatggtttcttgtttccttttttctttctcaacaaatgtcagt
gttatttcagtgtttatctgaatatacctttatgatatagataattatgt
ctgggagttcatgatacactatgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_67922691_67923269
seq2: B6Ng01-012H04.b_48_626 (reverse)

seq1  GAGTTCAGAAAGATTGAACCACAAATGAAGAGTTTGCACAGGCTGGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAGAAAGATTGAACCACAAATGAAGAGTTTGCACAGGCTGGACCT  50

seq1  AGCCCCCTGCCTGACATATATAGTAGATGTGCGGGTCTTCATGCAGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCCTGCCTGACATATATAGTAGATGTGCGGGTCTTCATGCAGGTCT  100

seq1  CAGAACATCTAGAGCAAGGGCATCCCTAAACCTGTTGTCTGTCTGTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACATCTAGAGCAAGGGCATCCCTAAACCTGTTGTCTGTCTGTGGAA  150

seq1  TCTGTTCCTCTAACTGGACTGCCTTGTCTGGCCTCAGTGGAAGAGGATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCCTCTAACTGGACTGCCTTGTCTGGCCTCAGTGGAAGAGGATGC  200

seq1  TCCTATCCATGCTGAGGCTCGATGTGCCAGGGTCAGGGGAGCCTCCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATCCATGCTGAGGCTCGATGTGCCAGGGTCAGGGGAGCCTCCACTC  250

seq1  TGATAGAACAGTGCGGTGCTTGGTGAGAGGGACTGTTTGATGGGAGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGAACAGTGCGGTGCTTGGTGAGAGGGACTGTTTGATGGGAGAACT  300

seq1  GGGAGCTCTGAGAATGATAAGGATGTAAAGTGAGTAAATATATAAATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTCTGAGAATGATAAGGATGTAAAGTGAGTAAATATATAAATAAA  350

seq1  ATAGAACTGAAGCGTTTTTAATTGTGCCATGAAACAGCATTTGGTATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACTGAAGCGTTTTTAATTGTGCCATGAAACAGCATTTGGTATAGG  400

seq1  GAAATCTGCAAGTCAACATTTCACATTATTTACCACTACAGTGATTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTGCAAGTCAACATTTCACATTATTTACCACTACAGTGATTCACT  450

seq1  ACAAAGGTGCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGTGCGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGTAAAA  500

seq1  ACATACCTTATTGTTCCATAACCAAGAGCAGGAGAAATTAATGCTGTGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACCTTATTGTTCCATAACCAAGAGCAGGAGAAATTAATGCTGTGTC  550

seq1  TGGAATGTAAGAGTGTGTTTTGTGAATTC  579
      |||||||||||||||||||||||||||||
seq2  TGGAATGTAAGAGTGTGTTTTGTGAATTC  579

seq1: chr16_67808367_67809458
seq2: B6Ng01-012H04.g_73_1148

seq1  GAATTCTCCATGAACCATGAAAAAATAATCTATCAAAAAACTAAGAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGAACCATGAAAAAATAATCTATCAAAAAACTAAGAGAGG  50

seq1  ATGAGAGATAAAGAGAAGGACCATAGATGTGCTAGCCTACTAGTGAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGATAAAGAGAAGGACCATAGATGTGCTAGCCTACTAGTGAGCTC  100

seq1  ACTGGTTATGGAAATTCATTTGGTACTTACTGTTTCAAAATAGAGAGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTATGGAAATTCATTTGGTACTTACTGTTTCAAAATAGAGAGACT  150

seq1  AGATGAGGAGTTACAACTTTCTGCATCCATCATCTCACTTTTCACTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGAGTTACAACTTTCTGCATCCATCATCTCACTTTTCACTTATT  200

seq1  TGGTTTTGAGCAGCAAGCATCTGCAAATAATATTTTAATATCAAAGTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTGAGCAGCAAGCATCTGCAAATAATATTTTAATATCAAAGTTGA  250

seq1  AATATTGTTTCACTTCTCTGATTGTGATGCTTTGAAAAAGGATTTTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTTTCACTTCTCTGATTGTGATGCTTTGAAAAAGGATTTTTATC  300

seq1  TTTTTCATGTATGCACTTTGGAAGAAGACAGCAATATAACCCTGACTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATGTATGCACTTTGGAAGAAGACAGCAATATAACCCTGACTTCC  350

seq1  AATTTGTCTCAGATATTATTTTGTCTAACTCACATGAAAAGACCATAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTCTCAGATATTATTTTGTCTAACTCACATGAAAAGACCATAATA  400

seq1  TTTCTGTGCTTTTATAATTGATACTATGAATTGATAGTGGGTTTTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTGCTTTTATAATTGATACTATGAATTGATAGTGGGTTTTTTTTT  450

seq1  TTTTTGAGTGTTGTCTCTCTAATCCATCTATAATGGTATCTTTGTAGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGTGTTGTCTCTCTAATCCATCTATAATGGTATCTTTGTAGTTA  500

seq1  AGAGATTACTTTTAATAGGAAAACAAAATACCTTCAGCCAAATTTCTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTACTTTTAATAGGAAAACAAAATACCTTCAGCCAAATTTCTCCT  550

seq1  GAACCCTGCCCACCCTGTATGTATCTCTTGTCAGACAATGTGAAGTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTGCCCACCCTGTATGTATCTCTTGTCAGACAATGTGAAGTACAT  600

seq1  ATGGTTCCATATCCATTTGTTGCTGGGTCAGCTGCCTACTAGGCCACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCCATATCCATTTGTTGCTGGGTCAGCTGCCTACTAGGCCACATA  650

seq1  TTTACAAAGTGTGAGTTTGACTTTGACTGTGTTTCTTCCCTTTATTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAGTGTGAGTTTGACTTTGACTGTGTTTCTTCCCTTTATTTTCT  700

seq1  AGAAAGTTATGTTATAAGAACATTGTTGCTCAGTTTCACTTTCTGCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTTATGTTATAAGAACATTGTTGCTCAGTTTCACTTTCTGCTTCC  750

seq1  CTCCCCTCATTTGAGTTTCTGAATTCTAATCATCCTTACAAAATGCATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCATTTGAGTTTCTGAATTCTAATCATCCTTACAAAATGCATCA  800

seq1  ACTCATTTCATTTTTCATCCAATACCTGAGGGCATCCTGATACAGTACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTTCATTTTTCATCCAATACCTGAGGGCATCCTGATACAGTACTT  850

seq1  TGGAAGTCATGTACTAAATGCAATTTTCCCCTGTTAATAAGTGTTCTTTA  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGAAGTCATGTACTAAATGCAATTTTCCCCTGTTAAT-AGTGTTCTTTA  899

seq1  CCTTCCAAGTTTTCAGAACTCCCGTTACATGTACATTTTGTTCTCAGAAT  950
      |||||||||||||||| |||||||||||||||||||||   |||||| ||
seq2  CCTTCCAAGTTTTCAGGACTCCCGTTACATGTACATTT--GTCTCAG-AT  946

seq1  ATAGTTATTAACATGGTTTCTTGTTTCCTTTTTTCTTTCCTTCCAACAAA  1000
      |||||||||||||||||||||||||||||||||||||||    |||| ||
seq2  ATAGTTATTAACATGGTTTCTTGTTTCCTTTTTTCTTTC---TCAAC-AA  992

seq1  ATGTCAGTGTTATTTCAGTGTTTATCCTGATTTATACCCTTTATGATAAT  1050
      ||||||||||||||||||||||||| ||||  |||| |||||||||||  
seq2  ATGTCAGTGTTATTTCAGTGTTTAT-CTGA-ATATA-CCTTTATGATA--  1037

seq1  TAGTATATTATGTTCTGTGAGTTTCAATGATACACTATGAAA  1092
      |||   |||||| |||| |||||   ||||||||||||||||
seq2  TAGATAATTATG-TCTGGGAGTT--CATGATACACTATGAAA  1076