BAC Information

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BAC

Clone NameB6Ng01-012M14
Chromosome16 (Build37)
Map Location 85,728,449 - 85,857,688
singlet/doubletdoublet
Overlap geneAdamts1
Upstream geneMrpl39, Jam2, Atp5j, LOC100039950, Gabpa, Gm311, App, Cyyr1, LOC100039994, LOC622000
Downstream geneAdamts5, LOC100040025, LOC100039780
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012M14.bB6Ng01-012M14.g
ACCDH847777DH847778
length1,2111,169
definitionDH847777|Mus musculus domesticus DNA, BAC clone: B6Ng01-012M14, 5' end.DH847778|Mus musculus domesticus DNA, BAC clone: B6Ng01-012M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,856,442 - 85,857,688)(85,728,449 - 85,729,636)
sequence
gaattccatggacacctgtgctcacaatacacagttgtttaactcaattt
ttctttgccttatctagtgaaaaaccgttatcgtaacagaggtgctaagg
tctttagcaatgactgtcaaatatagcattactgacttcgtttttagttt
tcacaccattctataacttactaaaaaatgatctctatcctttttgttaa
gtccaggcacaaaaggttgaggagtcagcatatctaatggacattctgat
ccatggtatatctgagcacagttaagagatcatcaaatcttgaagagaga
ccggtgagagtttggtctttgtgtttctgaatttctaagttttcaacagt
tagtggaaacttctctgtgtgtattttcttcttaaacattgtagtgtttc
atgctgtagtcaacatttagtgcctagatctcaacctctttctaatattt
accttgaaatattggtacctatacagagagtgtaattagagtaggggttc
tcatcaatgtgtaaaattgtaaggttagacttctgactgagagatgtctg
gtctttacatagcagtattgaaatgtgcatttgcgtgcagcatgaaaatt
gctggttcatttgctacagtcaagaagtggcaaacactgcttatatttta
atagcgattgattaattggttgattgattggttggttgcttggttggttt
gttgatgggaaacatacatagttttgagaataaatattgcaagtagctaa
atcaatggcagaaacacaacccatttgacataagcagtggcaccaacgct
gagcttctattagtgttaatgagtaaaatagtaaaccttagtagttagaa
ctcagatgtttgaaatctgaaaacgtatttccctgataataaaagataat
ttccctgataataaaagataatgacacctgaaatgatggcattcaatgca
gttgagaggtcaaaaaaaaaaaaaattttggaaaagtgagaaaggtttga
tgaaatgtcctccttagcttgacaacttcagaataggaatggctatttgg
agtatgctatatctcagtctacagtccatacgaattcgtctttttttttt
gatttacgaaaacctgaattggacctgtttgacctaacctattatttcat
gagggaatctttttaagcagattttctgcattaacgtttactacgtgctg
tttcagtggac
gaattccaggattaaaaaacaacccagccttctagtgtcaagagcaaagg
tcactgtgaagacagaaaatgcctcctgcagaaaggcactgaaaggacca
ttgaggacaaaaaggtagtgggaagagacactcaacagagaaatggaggc
aactgcaaaacctcctgactgtaaatattaatgtgcaaaatagtaaaaaa
tacagacagtttaagagtattagcttgggccgggcagtggtggcacatgc
ctttaatcccagcagttggaaggcaaaggcaggtggatttctgagttcga
ggccagcctggtctacagagtgagttccaggacagccagggctatacaga
gaaaccctgtctcacaaaaccaaaaccaataaataaataaataaataaat
aaataaataaataaatagtattagcttgggaagtttgattgagatagtga
aagatctgtaagagcctggtgaggtggcacacaactttaatcccagtact
cagtaagcagaggtagatggatctctgttttgggggacagcctggtctac
aaaatgcatcattagcaagtcagggttatattgtaagatcatgtatcaat
aaaagagaaggaaggaagaagaaaaggaaggaaggaaggaaggaaggaag
gaaggaaggaaggaaggaaggaaggaagaaggaaaagaaaagaacaccag
agtagagtacctaaactcaggctcagtggaaagtaaaatcatgatgatat
tggtaatggggatatcaacaatctgaagaaataaatgtatgtatatactc
atacatatgagtatatatataaatgaatatatatatatatcatctctcta
tatatgtatagataaaatctataatataatagtgtatgtatatcttaaaa
ctaactcaggaagatatacaagatgtctccaagctcaactgaaatatttg
tgtctttactgtttctcataaacaactagctgagactattttacgacaca
tattaaggggcaaacagttaatactgtcattaattctctagagacagaat
aataaatgcggcgtgtcaggctgcttagcttcacctcaggctgtcagtgt
ttatgcattaaccagtcttctgacattccaagagctcagagtcctttagg
agtcaaaagtcaaaatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_85856442_85857688
seq2: B6Ng01-012M14.b_46_1256 (reverse)

seq1  GTCCACTGAAACAGCAGTTAGGTATACAGTTTAATTTCACAGAGAAAAAA  50
      ||||||||||||||||  |||   || |  |||||       ||||||  
seq2  GTCCACTGAAACAGCACGTAG---TAAACGTTAAT-----GCAGAAAA--  40

seq1  TTTTTTGCTTTATAAAATAGTATTCCTCAATGAAAAATAATTACAGTTTA  100
         | |||||    ||| || |||||   |||  |||||||   || |||
seq2  ---TCTGCTT----AAAAAG-ATTCCCTCATG--AAATAAT---AGGTTA  77

seq1  GGTCCAAAACAGCT-CAATTCAAGTGTTTTTCTGAAATTTAAAAAAAAAA  149
      ||||  |||||| | |||||||   | ||||| | || | ||||||||||
seq2  GGTC--AAACAGGTCCAATTCA---GGTTTTC-GTAAATCAAAAAAAAAA  121

seq1  GAAAGGATTTGGTATGGACTGTAGACTGAGATATAGCAATACTCCAAATA  199
      |  | || || |||||||||||||||||||||||||| ||||||||||||
seq2  G--ACGAATTCGTATGGACTGTAGACTGAGATATAGC-ATACTCCAAATA  168

seq1  GCCAATTCCTA-TCTGAAGTTTGTCAAAGCTAAGGA-GACATTTTCATCA  247
      ||| ||||||| ||||||| ||||| |||||||||| |||| ||||||| 
seq2  GCC-ATTCCTATTCTGAAG-TTGTC-AAGCTAAGGAGGACA-TTTCATC-  213

seq1  AAACCTGTCTCACTTTTTCCAAGATTTTTTTTTTTTTTGGCCTCTCAACT  297
      |||||| |||||| |||||||| |||||||||||||||| ||||||||||
seq2  AAACCTTTCTCAC-TTTTCCAAAATTTTTTTTTTTTTTGACCTCTCAACT  262

seq1  GCATTGAATGCCATCATTTTCAGGTGTCATTATCTTTTATTATCAGGGAA  347
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GCATTGAATGCCATCA-TTTCAGGTGTCATTATCTTTTATTATCAGGGAA  311

seq1  ATTATCTTTTATTATCAGGGAAATACGTTTTCAGATTTCAAACATCTGAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTTTTATTATCAGGGAAATACGTTTTCAGATTTCAAACATCTGAG  361

seq1  TTCTAACTACTAAGGTTTACTATTTTACTCATTAACACTAATAGAAGCTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACTACTAAGGTTTACTATTTTACTCATTAACACTAATAGAAGCTC  411

seq1  AGCGTTGGTGCCACTGCTTATGTCAAATGGGTTGTGTTTCTGCCATTGAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTTGGTGCCACTGCTTATGTCAAATGGGTTGTGTTTCTGCCATTGAT  461

seq1  TTAGCTACTTGCAATATTTATTCTCAAAACTATGTATGTTTCCCATCAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTACTTGCAATATTTATTCTCAAAACTATGTATGTTTCCCATCAAC  511

seq1  AAACCAACCAAGCAACCAACCAATCAATCAACCAATTAATCAATCGCTAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAACCAAGCAACCAACCAATCAATCAACCAATTAATCAATCGCTAT  561

seq1  TAAAATATAAGCAGTGTTTGCCACTTCTTGACTGTAGCAAATGAACCAGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATAAGCAGTGTTTGCCACTTCTTGACTGTAGCAAATGAACCAGC  611

seq1  AATTTTCATGCTGCACGCAAATGCACATTTCAATACTGCTATGTAAAGAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCATGCTGCACGCAAATGCACATTTCAATACTGCTATGTAAAGAC  661

seq1  CAGACATCTCTCAGTCAGAAGTCTAACCTTACAATTTTACACATTGATGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATCTCTCAGTCAGAAGTCTAACCTTACAATTTTACACATTGATGA  711

seq1  GAACCCCTACTCTAATTACACTCTCTGTATAGGTACCAATATTTCAAGGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCCTACTCTAATTACACTCTCTGTATAGGTACCAATATTTCAAGGT  761

seq1  AAATATTAGAAAGAGGTTGAGATCTAGGCACTAAATGTTGACTACAGCAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAGAAAGAGGTTGAGATCTAGGCACTAAATGTTGACTACAGCAT  811

seq1  GAAACACTACAATGTTTAAGAAGAAAATACACACAGAGAAGTTTCCACTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACACTACAATGTTTAAGAAGAAAATACACACAGAGAAGTTTCCACTA  861

seq1  ACTGTTGAAAACTTAGAAATTCAGAAACACAAAGACCAAACTCTCACCGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGAAAACTTAGAAATTCAGAAACACAAAGACCAAACTCTCACCGG  911

seq1  TCTCTCTTCAAGATTTGATGATCTCTTAACTGTGCTCAGATATACCATGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTTCAAGATTTGATGATCTCTTAACTGTGCTCAGATATACCATGG  961

seq1  ATCAGAATGTCCATTAGATATGCTGACTCCTCAACCTTTTGTGCCTGGAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAATGTCCATTAGATATGCTGACTCCTCAACCTTTTGTGCCTGGAC  1011

seq1  TTAACAAAAAGGATAGAGATCATTTTTTAGTAAGTTATAGAATGGTGTGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAAAAAGGATAGAGATCATTTTTTAGTAAGTTATAGAATGGTGTGA  1061

seq1  AAACTAAAAACGAAGTCAGTAATGCTATATTTGACAGTCATTGCTAAAGA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAAAACGAAGTCAGTAATGCTATATTTGACAGTCATTGCTAAAGA  1111

seq1  CCTTAGCACCTCTGTTACGATAACGGTTTTTCACTAGATAAGGCAAAGAA  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGCACCTCTGTTACGATAACGGTTTTTCACTAGATAAGGCAAAGAA  1161

seq1  AAATTGAGTTAAACAACTGTGTATTGTGAGCACAGGTGTCCATGGAATTC  1247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGAGTTAAACAACTGTGTATTGTGAGCACAGGTGTCCATGGAATTC  1211

seq1: chr16_85728449_85729636
seq2: B6Ng01-012M14.g_67_1235

seq1  GAATTCCAGGATTAAAAAACAACCCAGCCTTCTAGTGTCAAGAGCAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATTAAAAAACAACCCAGCCTTCTAGTGTCAAGAGCAAAGG  50

seq1  TCACTGTGAAGACAGAAAATGCCTCCTGCAGAAAGGCACTGAAAGGACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTGAAGACAGAAAATGCCTCCTGCAGAAAGGCACTGAAAGGACCA  100

seq1  TTGAGGACAAAAAGGTAGTGGGAAGAGACACTCAACAGAGAAATGGAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGACAAAAAGGTAGTGGGAAGAGACACTCAACAGAGAAATGGAGGC  150

seq1  AACTGCAAAACCTCCTGACTGTAAATATTAATGTGCAAAATAGTAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAAAACCTCCTGACTGTAAATATTAATGTGCAAAATAGTAAAAAA  200

seq1  TACAGACAGTTTAAGAGTATTAGCTTGGGCCGGGCAGTGGTGGCACATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACAGTTTAAGAGTATTAGCTTGGGCCGGGCAGTGGTGGCACATGC  250

seq1  CTTTAATCCCAGCAGTTGGAAGGCAAAGGCAGGTGGATTTCTGAGTTCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCCCAGCAGTTGGAAGGCAAAGGCAGGTGGATTTCTGAGTTCGA  300

seq1  GGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGA  350

seq1  GAAACCCTGTCTCACAAAACCAAAACCAATAAATAAATAAATAAATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCTGTCTCACAAAACCAAAACCAATAAATAAATAAATAAATAAAT  400

seq1  AAATAAATAAATAAATAGTATTAGCTTGGGAAGTTTGATTGAGATAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATAAATAGTATTAGCTTGGGAAGTTTGATTGAGATAGTGA  450

seq1  AAGATCTGTAAGAGCCTGGTGAGGTGGCACACAACTTTAATCCCAGTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTGTAAGAGCCTGGTGAGGTGGCACACAACTTTAATCCCAGTACT  500

seq1  CAGTAAGCAGAGGTAGATGGATCTCTGTTTTGGGGGACAGCCTGGTCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGCAGAGGTAGATGGATCTCTGTTTTGGGGGACAGCCTGGTCTAC  550

seq1  AAAATGCATCATTAGCAAGTCAGGGTTATATTGTAAGATCATGTATCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCATCATTAGCAAGTCAGGGTTATATTGTAAGATCATGTATCAAT  600

seq1  AAAAGAGAAGGAAGGAAGAAGAAAAGGAAGGAAGGAAGGAAGGAAGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAGGAAGGAAGAAGAAAAGGAAGGAAGGAAGGAAGGAAGGAAG  650

seq1  GAAGGAAGGAAGGAAGGAAGGAAGGAAGAAGGAAAAGAAAAGAACACCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAAGGAAGGAAGGAAGGAAGGAAGAAGGAAAAGAAAAGAACACCAG  700

seq1  AGTAGAGTACCTAAACTCAGGCTCAGTGGAAAGTAAAATCATGATGATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGTACCTAAACTCAGGCTCAGTGGAAAGTAAAATCATGATGATAT  750

seq1  TGGTAATGGGGATATCAACAATCTGAAGAAATAAATGTATGTATATACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATGGGGATATCAACAATCTGAAGAAATAAATGTATGTATATACTC  800

seq1  ATACATATGAGTATATATATAAATGAATATATATATATATCATCTCTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATGAGTATATATATAAATGAATATATATATATATCATCTCTCTA  850

seq1  TATATGTATAGATAAAATCTATAATATAATAGTGTATGTATATCTTAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTATAGATAAAATCTATAATATAATAGTGTATGTATATCTTAAAA  900

seq1  CTAACTCAGGAAGATATACAAGATGTCTCCAAGCTCAACTGAAATATTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTCAGGAAGATATACAAGATGTCTCCAAGCTCAACTGAAATATTTG  950

seq1  TGTCTTTACTGTTTCTCATAAACAACTAGCTGAGACTATTTTTACAAACA  1000
      |||||||||||||||||||||||||||||||||||||| ||||||  |||
seq2  TGTCTTTACTGTTTCTCATAAACAACTAGCTGAGACTA-TTTTAC-GACA  998

seq1  CATATTTAGGGGGCAAACAGTT-ATACTGTCATAAATTCTCTAAGAGGAC  1049
      |||| ||| ||||||||||||| |||||||||| |||||||| ||| |||
seq2  CATA-TTAAGGGGCAAACAGTTAATACTGTCATTAATTCTCT-AGA-GAC  1045

seq1  AGAATAAT-AATGCGGCGGTGCCAGGCTGCTTTGCTACCACTCAGGCTGG  1098
      |||||||| |||||||| ||| |||||||||| ||| |  |||||||| |
seq2  AGAATAATAAATGCGGC-GTGTCAGGCTGCTTAGCTTCACCTCAGGCT-G  1093

seq1  TCAGTTGTTATGCCATTAAACCAAGTCTCCTGACATTCCAAGAAGCTCCA  1148
      |||||  ||||| ||||||  | ||||| ||||||||||||| |||||  
seq2  TCAGTGTTTATG-CATTAA--CCAGTCTTCTGACATTCCAAG-AGCTC--  1137

seq1  AGAGTCTTTTAAGGAGAGTCAAAAAGATGCTAAAAATATG  1188
      |||||| ||||    |||||||||      | ||||||||
seq2  AGAGTCCTTTA---GGAGTCAAAA-----GTCAAAATATG  1169