BAC Information

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BAC

Clone NameB6Ng01-014G14
Chromosome16 (Build37)
Map Location 10,978,906 - 10,979,745
singlet/doubletsinglet
Overlap genenone
Upstream geneGrin2a, LOC665291, LOC100042534, 4930517K11Rik, Atf7ip2, Emp2, Tekt5, Nubp1, BC068110, Ciita, LOC669998, Dexi, 4932416N17Rik, Socs1, Tnp2, Prm3, Prm2, Prm1, A630055G03Rik, Litaf
Downstream geneLOC100043147, LOC100042597, Snn, Txndc11, Zc3h7a, LOC665450, LOC622271, Rsl1d1, Gspt1, Tnfrsf17, 4933437K13Rik, LOC100043171, C530044N13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014G14.b
ACCDH848966
length854
definitionDH848966|Mus musculus domesticus DNA, BAC clone: B6Ng01-014G14, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattaagtcatttctctctttgttttgctagctgtggttagaag
caaccacataggactttaccatctttaagaatttcttctgccaactgtgg
atcttacactggcctcccgcacagagccttggggcatgcctgtgctttta
ctacttcagttttttcctgagctctcagccagaaagaaggccctagcctg
acactctggtgcgactatggtgagctcagggtcccttctcacttttggag
gtgcccctaaagtccttttcctctcctgtcttggctgctgctggcctctc
cccctccagctgttactcagttccaaagacgtgtacattccagctgtcca
tcagggcagcacctgcctcccgggtcccatcctgtgtttactacagtaag
aggatacatgacgtttctgtaattgaaacagtccagctcggggctgtgca
ttgccggccaagcattccgccagctgagtccagctctcgccttctttgtt
tattgttatcgagacagggtctctctgttatgcagctatggctgtcctgg
aacacactatgtagactgggctggcctcaaatgtagagatccaccagcct
ctgtctctgagtactggtgttaaagatgtaccaccatgcttgacttatag
aagtgggcagtggtggcacaccttttaatcccagcactcgaggcagaggc
aggcagaactctgagtttgaggccaacttggtctacagagcaagttctag
acagccaagagcatcacagaagaaacactgtctcaaataaataaatacat
actacatcctacatacatacgtacatgaattcataaaacatctcattgtg
aatc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_10978906_10979745
seq2: B6Ng01-014G14.b_40_877 (reverse)

seq1  TTTTATGAATTTATGTATGTATGTATGTATGTATGTATGTATGTATTTAT  50
      ||||||||||| ||||| ||||||||||| | ||||| ||||||||||||
seq2  TTTTATGAATTCATGTACGTATGTATGTA-GGATGTA-GTATGTATTTAT  48

seq1  TTATTTTGAGACAGGGTTTCTTCTGTGATGC-CCTGGCTGTCCTAGAACT  99
      ||| |||||||||| |||||||||||||||| | ||||||| ||||||||
seq2  TTA-TTTGAGACAGTGTTTCTTCTGTGATGCTCTTGGCTGT-CTAGAACT  96

seq1  TGCTCTGTAGACCAAGTTGGCCTCAAACTCAGAGTTCTGCCTGCCTCTGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGTAGACCAAGTTGGCCTCAAACTCAGAGTTCTGCCTGCCTCTGC  146

seq1  CTCGAGTGCTGGGATT-AAAGGTGTGCCACCACTGCCCACTTCTATAAGT  198
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTCGAGTGCTGGGATTAAAAGGTGTGCCACCACTGCCCACTTCTATAAGT  196

seq1  CAAGCATGGTGGTACATCTTTAACACCAGTACTCAGAGACAGAGGCTGGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCATGGTGGTACATCTTTAACACCAGTACTCAGAGACAGAGGCTGGT  246

seq1  GGATCTCTACATTTGAGGCCAGCCCAGTCTACATAGTGTGTTCCAGGACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTCTACATTTGAGGCCAGCCCAGTCTACATAGTGTGTTCCAGGACA  296

seq1  GCCATAGCTGCATAACAGAGAGACCCTGTCTCGATAACAATAAACAAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGCTGCATAACAGAGAGACCCTGTCTCGATAACAATAAACAAAGA  346

seq1  AGGCGAGAGCTGGACTCAGCTGGCGGAATGCTTGGCCGGCAATGCACAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGAGAGCTGGACTCAGCTGGCGGAATGCTTGGCCGGCAATGCACAGC  396

seq1  CCCGAGCTGGACTGTTTCAATTACAGAAACGTCATGTATCCTCTTACTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGCTGGACTGTTTCAATTACAGAAACGTCATGTATCCTCTTACTGT  446

seq1  AGTAAACACAGGATGGGACCCGGGAGGCAGGTGCTGCCCTGATGGACAGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACACAGGATGGGACCCGGGAGGCAGGTGCTGCCCTGATGGACAGC  496

seq1  TGGAATGTACACGTCTTTGGAACTGAGTAACAGCTGGAGGGGGAGAGGCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGTACACGTCTTTGGAACTGAGTAACAGCTGGAGGGGGAGAGGCC  546

seq1  AGCAGCAGCCAAGACAGGAGAGGAAAAGGACTTTAGGGGCACCTCCAAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCAGCCAAGACAGGAGAGGAAAAGGACTTTAGGGGCACCTCCAAAA  596

seq1  GTGAGAAGGGACCCTGAGCTCACCATAGTCGCACCAGAGTGTCAGGCTAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAGGGACCCTGAGCTCACCATAGTCGCACCAGAGTGTCAGGCTAG  646

seq1  GGCCTTCTTTCTGGCTGAGAGCTCAGGAAAAAACTGAAGTAGTAAAAGCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTTTCTGGCTGAGAGCTCAGGAAAAAACTGAAGTAGTAAAAGCA  696

seq1  CAGGCATGCCCCAAGGCTCTGTGCGGGAGGCCAGTGTAAGATCCACAGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGCCCCAAGGCTCTGTGCGGGAGGCCAGTGTAAGATCCACAGTT  746

seq1  GGCAGAAGAAATTCTTAAAGATGGTAAAGTCCTATGTGGTTGCTTCTAAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAGAAATTCTTAAAGATGGTAAAGTCCTATGTGGTTGCTTCTAAC  796

seq1  CACAGCTAGCAAAACAAAGAGAGAAATGACTTAATGGAATTC  840
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTAGCAAAACAAAGAGAGAAATGACTTAATGGAATTC  838