BAC Information

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BAC

Clone NameB6Ng01-015D22
Chromosome16 (Build37)
Map Location 83,432,920 - 83,566,060
singlet/doubletdoublet
Overlap geneLOC100039572
Upstream geneEG665260, EG545172
Downstream geneEG621729, LOC640489, LOC665664, LOC547311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015D22.bB6Ng01-015D22.g
ACCDH849557DH849558
length1,057634
definitionDH849557|Mus musculus domesticus DNA, BAC clone: B6Ng01-015D22, 5' end.DH849558|Mus musculus domesticus DNA, BAC clone: B6Ng01-015D22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(83,564,976 - 83,566,060)(83,432,920 - 83,433,553)
sequence
gaattcttcatcttcaggtatagcaaattgcaagtgacgaaaggtatata
ctttacctttaagccttttgatacatttcgtgccaactcaagaacctttg
tggtatggaaatccaggatggctgcaatgtgcacatcagcattgtgccca
agtgcccatggatggttggattagatttcaggtgtcagaacatatggcca
atggggaactgtaagctggcttggtgccagcgggtaaccgcctttgcctt
agacttgctggagtcatttccagccttacggccagccatcttggactgtg
ctggccaggcaggcactcaacaagatcccagcacccacgcttccttcttt
accatgaacgaaacttcccctcatacgtttttctatgccatgttttcata
ttcatttgtattcacattcttcagtcatcatttaataatgcctactttaa
gatccacaattttgagatatttctgatgttattttatttatgtttttaaa
attgatcattacatttgtttacatctcaaatgatatcccacttcccagtc
acccctccaaaagcccccccatcccaccaactccctttcattccttccct
ttgcctttctgagggtggtccctcactcacccatcctctcctgcctcacc
cctccagtatccccccatgctggagcatcaaatctccagacctcctctcc
cattgatgtcatgcaagggccattctctgcttcctatgtatctgcagtca
tgaatccttccctgtacatttaagttttaataaattcagaacactcaaat
ttggcatatttttagattatgatatttacttcttcagttttccctagatc
aaagatatgacttatttatcatttaggtatagcttagtgcttctttcatg
tcatggattccttttcctcctcttcagtatgatggatcgtttaactgagt
aagtagctagtggcattagtttcttcagatttcatctctttgcttgtggt
gcgcatgtcaatgactacatatgctattctagtgagatcttgtcctcact
aattact
gaattctttgtaggcaacagggtactgcgtccttctgtgttttcaatgag
ttgtgtaagttttgtcttaagtaatcaagacttcctccatgtgaagaact
gcaagtaacctttcgagaagagtagataggtggtagtgcccatggcgccc
ctttgaccaagaatttcagtagatatttcccataatggatctttcatgct
ttccaggtttccagacagggctctgtctctctcattacttggtgatttaa
tttagattgactttatatatgtatacattttaggaagattctcctacgca
agatgtagttatggcctctcaaatcaccaacagttttagctattcctccc
tgttcatttttatagttatagaaatatatagattggcactgatctatgag
taaacagaatctcattagggtgttttctctgcctcaagtcatagttagtt
ctatcctacgtctgtgggatttccagtctggctcctgaccatctagttaa
actaaatactgattggcaactttttgtcctgttaggttgtcatctcttag
aggactgctcttttttttttttttttttttttttggaaatggaacacaaa
tgggtctagggaagtagtgaggtgtagtgaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83564976_83566060
seq2: B6Ng01-015D22.b_42_1098 (reverse)

seq1  AGTAATTAGGGTTTGAGGACAAGATTCTCACTAGAAATAGCATATTGTAG  50
      |||||||||    ||||||||||| ||||||||| ||||||||| |||||
seq2  AGTAATTAG----TGAGGACAAGA-TCTCACTAG-AATAGCATA-TGTAG  43

seq1  TCAATGGACCATGCGCACCACAAAGCAAAGAGATGAAAATTCTGAAAGAA  100
      ||| ||   |||||||||||| ||||||||||||||||  ||||||   |
seq2  TCATTG--ACATGCGCACCAC-AAGCAAAGAGATGAAA--TCTGAA--GA  86

seq1  AACTAATGCCAACCTAGGCTACTTTACTCAGTTAAACGATCCATCATTAC  150
      |||||||||||  ||| ||||| ||||||||||||||||||||||| |||
seq2  AACTAATGCCA--CTA-GCTAC-TTACTCAGTTAAACGATCCATCA-TAC  131

seq1  TGAAAGAGAGGGAAAAGGAATCCATGACCATGAAAGAAGCACTAAGCTTA  200
      || |||||  ||||||||||||||||| ||||||||||||||||||| ||
seq2  TG-AAGAGGAGGAAAAGGAATCCATGA-CATGAAAGAAGCACTAAGC-TA  178

seq1  TACCTTAAATGATAAATAAGTTCATATCTTTTGATCTAGGGGAAAACTGA  250
      |||| ||||||||||||||| ||||||| ||||||||| |||||||||||
seq2  TACC-TAAATGATAAATAAG-TCATATC-TTTGATCTA-GGGAAAACTGA  224

seq1  AGAAGTAAATATCATAATCCTAAAAATATGGCCAAATTTGAGTGTTCTGA  300
      |||||||||||||||||| |||||||||| ||||||||||||||||||||
seq2  AGAAGTAAATATCATAAT-CTAAAAATAT-GCCAAATTTGAGTGTTCTGA  272

seq1  ATTTATTAAAACCTTAAATGTACAGGGAAGGATTCATGACTGCAGATACA  350
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAAAA-CTTAAATGTACAGGGAAGGATTCATGACTGCAGATACA  321

seq1  TAGGAAGCAGAGAATGG-CCTTGCCTGACATCAATGGGAGAGGAGGTCTG  399
      ||||||||||||||||| |||||| |||||||||||||||||||||||||
seq2  TAGGAAGCAGAGAATGGCCCTTGCATGACATCAATGGGAGAGGAGGTCTG  371

seq1  GAGATTTGATGCTCCAGCATGGGGGGATACTGGAGGGGTGAGGCAGGAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTGATGCTCCAGCATGGGGGGATACTGGAGGGGTGAGGCAGGAGA  421

seq1  GGATGGGTGAGTGAGGGACCACCCTCAGAAAGGCAAAGGGAAGGAATGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGTGAGTGAGGGACCACCCTCAGAAAGGCAAAGGGAAGGAATGAA  471

seq1  AGGGAGTTGGTGGGATGGGGGGGCTTTTGGAGGGGTGACTGGGAAGTGGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTTGGTGGGATGGGGGGGCTTTTGGAGGGGTGACTGGGAAGTGGG  521

seq1  ATATCATTTGAGATGTAAACAAATGTAATGATCAATTTTAAAAACATAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTTGAGATGTAAACAAATGTAATGATCAATTTTAAAAACATAAA  571

seq1  TAAAATAACATCAGAAATATCTCAAAATTGTGGATCTTAAAGTAGGCATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAACATCAGAAATATCTCAAAATTGTGGATCTTAAAGTAGGCATT  621

seq1  ATTAAATGATGACTGAAGAATGTGAATACAAATGAATATGAAAACATGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGATGACTGAAGAATGTGAATACAAATGAATATGAAAACATGGC  671

seq1  ATAGAAAAACGTATGAGGGGAAGTTTCGTTCATGGTAAAGAAGGAAGCGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAACGTATGAGGGGAAGTTTCGTTCATGGTAAAGAAGGAAGCGT  721

seq1  GGGTGCTGGGATCTTGTTGAGTGCCTGCCTGGCCAGCACAGTCCAAGATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGGGATCTTGTTGAGTGCCTGCCTGGCCAGCACAGTCCAAGATG  771

seq1  GCTGGCCGTAAGGCTGGAAATGACTCCAGCAAGTCTAAGGCAAAGGCGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCGTAAGGCTGGAAATGACTCCAGCAAGTCTAAGGCAAAGGCGGT  821

seq1  TACCCGCTGGCACCAAGCCAGCTTACAGTTCCCCATTGGCCATATGTTCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCGCTGGCACCAAGCCAGCTTACAGTTCCCCATTGGCCATATGTTCT  871

seq1  GACACCTGAAATCTAATCCAACCATCCATGGGCACTTGGGCACAATGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCTGAAATCTAATCCAACCATCCATGGGCACTTGGGCACAATGCTG  921

seq1  ATGTGCACATTGCAGCCATCCTGGATTTCCATACCACAAAGGTTCTTGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACATTGCAGCCATCCTGGATTTCCATACCACAAAGGTTCTTGAG  971

seq1  TTGGCACGAAATGTATCAAAAGGCTTAAAGGTAAAGTATATACCTTTCGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCACGAAATGTATCAAAAGGCTTAAAGGTAAAGTATATACCTTTCGT  1021

seq1  CACTTGCAATTTGCTATACCTGAAGATGAAGAATTC  1085
      ||||||||||||||||||||||||||||||||||||
seq2  CACTTGCAATTTGCTATACCTGAAGATGAAGAATTC  1057

seq1: chr16_83432920_83433553
seq2: B6Ng01-015D22.g_66_699

seq1  GAATTCTTTGTAGGCAACAGGGTACTGCGTCCTTCTGTGTTTTCAATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTAGGCAACAGGGTACTGCGTCCTTCTGTGTTTTCAATGAG  50

seq1  TTGTGTAAGTTTTGTCTTAAGTAATCAAGACTTCCTCCATGTGAAGAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAAGTTTTGTCTTAAGTAATCAAGACTTCCTCCATGTGAAGAACT  100

seq1  GCAAGTAACCTTTCGAGAAGAGTAGATAGGTGGTAGTGCCCATGGCGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTAACCTTTCGAGAAGAGTAGATAGGTGGTAGTGCCCATGGCGCCC  150

seq1  CTTTGACCAAGAATTTCAGTAGATATTTCCCATAATGGATCTTTCATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACCAAGAATTTCAGTAGATATTTCCCATAATGGATCTTTCATGCT  200

seq1  TTCCAGGTTTCCAGACAGGGCTCTGTCTCTCTCATTACTTGGTGATTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGTTTCCAGACAGGGCTCTGTCTCTCTCATTACTTGGTGATTTAA  250

seq1  TTTAGATTGACTTTATATATGTATACATTTTAGGAAGATTCTCCTACGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATTGACTTTATATATGTATACATTTTAGGAAGATTCTCCTACGCA  300

seq1  AGATGTAGTTATGGCCTCTCAAATCACCAACAGTTTTAGCTATTCCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAGTTATGGCCTCTCAAATCACCAACAGTTTTAGCTATTCCTCCC  350

seq1  TGTTCATTTTTATAGTTATAGAAATATATAGATTGGCACTGATCTATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCATTTTTATAGTTATAGAAATATATAGATTGGCACTGATCTATGAG  400

seq1  TAAACAGAATCTCATTAGGGTGTTTTCTCTGCCTCAAGTCATAGTTAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGAATCTCATTAGGGTGTTTTCTCTGCCTCAAGTCATAGTTAGTT  450

seq1  CTATCCTACGTCTGTGGGATTTCCAGTCTGGCTCCTGACCATCTAGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTACGTCTGTGGGATTTCCAGTCTGGCTCCTGACCATCTAGTTAA  500

seq1  ACTAAATACTGATTGGCAACTTTTTGTCCTGTTAGGTTGTCATCTCTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATACTGATTGGCAACTTTTTGTCCTGTTAGGTTGTCATCTCTTAG  550

seq1  AGGACTGCTCTTTTTTTTTTTTTTTTTTTTTTTTGGAAATGGAACACAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGCTCTTTTTTTTTTTTTTTTTTTTTTTTGGAAATGGAACACAAA  600

seq1  TGGGTCTAGGGAAGTAGTGAGGTGTAGTGAGGTT  634
      ||||||||||||||||||||||||||||||||||
seq2  TGGGTCTAGGGAAGTAGTGAGGTGTAGTGAGGTT  634