BAC Information

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BAC

Clone NameB6Ng01-015N19
Chromosome16 (Build37)
Map Location 74,429,332 - 74,549,869
singlet/doubletdoublet
Overlap genenone
Upstream geneRobo2
Downstream geneLOC665042, D930038D03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015N19.bB6Ng01-015N19.g
ACCDH850007DH850008
length1,0861,125
definitionDH850007|Mus musculus domesticus DNA, BAC clone: B6Ng01-015N19, 5' end.DH850008|Mus musculus domesticus DNA, BAC clone: B6Ng01-015N19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,548,764 - 74,549,869)(74,429,332 - 74,430,476)
sequence
gaattctgttagaaatgattcactataaatcagaaaaaaaattatagaaa
taatctcaaaatcatgatttagggcttggcttttacatattcttcaaaaa
gacttcatgatgatccataattcatgatacctatttctgtactgctggga
acttttcctcctcaaagcttttctctaatgatgaggtcacatggccagag
ctgttattagtgcctttaatgtctttcttcccagtttattatgtttccat
tttgcttaggaatacattagcctttgctgtagcccctgaaaacatgaatt
tgcacaatcagcttcaaacagacagtgagacctaactgaatgttatacgt
gcaatgcagacagccgaaattcatataaatttgagaattcagagtaagga
agtagaactaagaaattcacatttgcacacacaataaaaatcataagaag
cctagcaaagagaagagtgtataagcttgaaatactgaaatgtattagca
ttccttattgactataaaatgaaacactgctctggcatgagccccatgct
tctgtttgaaaacaaaagcagttttccattctagaattttaaatatttaa
atttataaacagttcatcagaaaaaaaaatgtcagtaaggtgctcagctt
taaaatttgcacattttaaacaaaaattctacgtatttagagatgtgtca
aagttggtggtctttgttttccctaatactgcactgcttatagttcttag
aactgtttgctgtttggtaactgaaatgatgcagtcatttatgcttaaag
tcaataaacgctttagaacggagagttgaaaagaatatgctactgagtgg
actaccaggtactgaatgttgtgtctttcaagtttagcgtttgtgatatt
ttattagcagaatctttaaagggaaaacttgaatgattcttgtttgttta
ctctaagctttctctctctggagagttctctatataattgctctctgctc
agatgtgtctatatacgcaggtgtctctattcactgggtctttcagcaaa
gtttgttcagggctattagctgggatgcttattaca
gaattccagccagatttttttttctgttacattcaactagccagtcatgt
atttgtcacaggtagacattgtgtacaataaatctgaattttgaggatcc
cagaaagtactacattaatgccatatttttcgaacctgggcatatttaga
agtattaaatattgccaatacctcctatatgctatagatatcctaatttt
caaatatatatataagacatttattgttcaattttatattccttatgtaa
taaacataaggaatgtgttgtgcagtacccaacaggctcaccaaattgag
acaaatgtatttttcatgagaatttgatcattgtaacagcttctaattta
ttctctctggttgtttctcatatttaaaaaaatattttaggcaaattcta
aattgataatgaggtaattgatctcttttaactttttagtgagatgctat
aacttttaatcagtctttcagttctatgaactcagaatactaaactcgtt
ttaagtatgaaaggtcattaaattatcatagaatattatataaacctcag
gcagacataaatatctcaacatttgttgcaaacattacagcctacttggt
actttaatatgaatttcatctttacacacttatttggtttattttctaaa
attttcagtgagacgaagaaaagaatggtttctgtaattgttcatatcca
ggccaatctcagggaatcagatgcactctgagtgtccttattacgttctg
tgaatggttaaatatatggaaccagagatggtgatggctttgagaaccag
caggaagggatgggaatcactatttaatgggtcatagagtttcagctgac
ggtgctgaggaagattctggagatgggtggacgagaagactgtataacag
gggcaagggcagagtatcatgaaatgtgcacttttaaaaaggatgaacat
agtactacttctaccatcatcacatcaggcagctcttcactttttacaga
tgtttagacactatagctcaagaaggagatgacgaacacattctctgaag
tcagactagcaattaataatctatttgcacttttctcagcatcaatgtaa
atggttccattctttatatcagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_74548764_74549869
seq2: B6Ng01-015N19.b_50_1135 (reverse)

seq1  TGTAATTAAGCATCACAGCTAATAGCCCTGGAACAAAACTCTGCTGGAAG  50
      ||||| |||||||| |||||||||||||| |||| ||||| ||||| |||
seq2  TGTAA-TAAGCATCCCAGCTAATAGCCCT-GAAC-AAACTTTGCTGAAAG  47

seq1  ACACAGTGATTAGAGACACCTGCCGGTTAATAATTAGACACATCTGAGCA  100
      || |||||| |||||||||||||  ||  |||  ||||||||||||||||
seq2  ACCCAGTGAATAGAGACACCTGC--GT--ATA--TAGACACATCTGAGCA  91

seq1  GAGAAGCAATTAATATAGAGGAACTCTCCCAGGAGAGAGAAAGCTTAGGA  150
      ||| ||||||| ||||||| |||||||||   ||||||||||||||| ||
seq2  GAG-AGCAATT-ATATAGA-GAACTCTCC--AGAGAGAGAAAGCTTA-GA  135

seq1  GTAAACAAAACAAGAATCATTCCAAGTTTTCCCCTTTAAAAGATTCTGCT  200
      |||||| |||||||||||||| |||||||||||  || ||||||||||||
seq2  GTAAAC-AAACAAGAATCATT-CAAGTTTTCCC--TTTAAAGATTCTGCT  181

seq1  AATAAAATATCACAAACGCTAAACTTTGAAAGACACAACATTCAGTACCT  250
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AATAAAATATCACAAACGCTAAAC-TTGAAAGACACAACATTCAGTACCT  230

seq1  GGTAGTCCACTCAGTAGCATATTCTTTTCAACTCTCCGTTCTAAAGCGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTCCACTCAGTAGCATATTCTTTTCAACTCTCCGTTCTAAAGCGTT  280

seq1  TATTGACTTTAAGCATAAATGACTGCATCATTTCAGTTACCAAACAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACTTTAAGCATAAATGACTGCATCATTTCAGTTACCAAACAGCAA  330

seq1  ACAGTTCTAAGAACTATAAGCAGTGCAGTATTAGGGAAAACAAAGACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTCTAAGAACTATAAGCAGTGCAGTATTAGGGAAAACAAAGACCAC  380

seq1  CAACTTTGACACATCTCTAAATACGTAGAATTTTTGTTTAAAATGTGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTGACACATCTCTAAATACGTAGAATTTTTGTTTAAAATGTGCAA  430

seq1  ATTTTAAAGCTGAGCACCTTACTGACATTTTTTTTTCTGATGAACTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAGCTGAGCACCTTACTGACATTTTTTTTTCTGATGAACTGTTT  480

seq1  ATAAATTTAAATATTTAAAATTCTAGAATGGAAAACTGCTTTTGTTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTAAATATTTAAAATTCTAGAATGGAAAACTGCTTTTGTTTTCA  530

seq1  AACAGAAGCATGGGGCTCATGCCAGAGCAGTGTTTCATTTTATAGTCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGCATGGGGCTCATGCCAGAGCAGTGTTTCATTTTATAGTCAAT  580

seq1  AAGGAATGCTAATACATTTCAGTATTTCAAGCTTATACACTCTTCTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATGCTAATACATTTCAGTATTTCAAGCTTATACACTCTTCTCTTT  630

seq1  GCTAGGCTTCTTATGATTTTTATTGTGTGTGCAAATGTGAATTTCTTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCTTCTTATGATTTTTATTGTGTGTGCAAATGTGAATTTCTTAGT  680

seq1  TCTACTTCCTTACTCTGAATTCTCAAATTTATATGAATTTCGGCTGTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTCCTTACTCTGAATTCTCAAATTTATATGAATTTCGGCTGTCTG  730

seq1  CATTGCACGTATAACATTCAGTTAGGTCTCACTGTCTGTTTGAAGCTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCACGTATAACATTCAGTTAGGTCTCACTGTCTGTTTGAAGCTGAT  780

seq1  TGTGCAAATTCATGTTTTCAGGGGCTACAGCAAAGGCTAATGTATTCCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAAATTCATGTTTTCAGGGGCTACAGCAAAGGCTAATGTATTCCTA  830

seq1  AGCAAAATGGAAACATAATAAACTGGGAAGAAAGACATTAAAGGCACTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATGGAAACATAATAAACTGGGAAGAAAGACATTAAAGGCACTAA  880

seq1  TAACAGCTCTGGCCATGTGACCTCATCATTAGAGAAAAGCTTTGAGGAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCTCTGGCCATGTGACCTCATCATTAGAGAAAAGCTTTGAGGAGG  930

seq1  AAAAGTTCCCAGCAGTACAGAAATAGGTATCATGAATTATGGATCATCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTCCCAGCAGTACAGAAATAGGTATCATGAATTATGGATCATCAT  980

seq1  GAAGTCTTTTTGAAGAATATGTAAAAGCCAAGCCCTAAATCATGATTTTG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCTTTTTGAAGAATATGTAAAAGCCAAGCCCTAAATCATGATTTTG  1030

seq1  AGATTATTTCTATAATTTTTTTTCTGATTTATAGTGAATCATTTCTAACA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATTTCTATAATTTTTTTTCTGATTTATAGTGAATCATTTCTAACA  1080

seq1  GAATTC  1106
      ||||||
seq2  GAATTC  1086

seq1: chr16_74429332_74430476
seq2: B6Ng01-015N19.g_67_1191

seq1  GAATTCCAGCCAGATTTTTTTTTCTGTTACATTCAACTAGCCAGTCATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCAGATTTTTTTTTCTGTTACATTCAACTAGCCAGTCATGT  50

seq1  ATTTGTCACAGGTAGACATTGTGTACAATAAATCTGAATTTTGAGGATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCACAGGTAGACATTGTGTACAATAAATCTGAATTTTGAGGATCC  100

seq1  CAGAAAGTACTACATTAATGCCATATTTTTCGAACCTGGGCATATTTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGTACTACATTAATGCCATATTTTTCGAACCTGGGCATATTTAGA  150

seq1  AGTATTAAATATTGCCAATACCTCCTATATGCTATAGATATCCTAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTAAATATTGCCAATACCTCCTATATGCTATAGATATCCTAATTTT  200

seq1  CAAATATATATATAAGACATTTATTGTTCAATTTTATATTCCTTATGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATATATATAAGACATTTATTGTTCAATTTTATATTCCTTATGTAA  250

seq1  TAAACATAAGGAATGTGTTGTGCAGTACCCAACAGGCTCACCAAATTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATAAGGAATGTGTTGTGCAGTACCCAACAGGCTCACCAAATTGAG  300

seq1  ACAAATGTATTTTTCATGAGAATTTGATCATTGTAACAGCTTCTAATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGTATTTTTCATGAGAATTTGATCATTGTAACAGCTTCTAATTTA  350

seq1  TTCTCTCTGGTTGTTTCTCATATTTAAAAAAATATTTTAGGCAAATTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTGGTTGTTTCTCATATTTAAAAAAATATTTTAGGCAAATTCTA  400

seq1  AATTGATAATGAGGTAATTGATCTCTTTTAACTTTTTAGTGAGATGCTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATAATGAGGTAATTGATCTCTTTTAACTTTTTAGTGAGATGCTAT  450

seq1  AACTTTTAATCAGTCTTTCAGTTCTATGAACTCAGAATACTAAACTCGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAATCAGTCTTTCAGTTCTATGAACTCAGAATACTAAACTCGTT  500

seq1  TTAAGTATGAAAGGTCATTAAATTATCATAGAATATTATATAAACCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTATGAAAGGTCATTAAATTATCATAGAATATTATATAAACCTCAG  550

seq1  GCAGACATAAATATCTCAACATTTGTTGCAAACATTACAGCCTACTTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACATAAATATCTCAACATTTGTTGCAAACATTACAGCCTACTTGGT  600

seq1  ACTTTAATATGAATTTCATCTTTACACACTTATTTGGTTTATTTTCTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAATATGAATTTCATCTTTACACACTTATTTGGTTTATTTTCTAAA  650

seq1  ATTTTCAGTGAGACGAAGAAAAGAATGGTTTCTGTAATTGTTCATATCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGTGAGACGAAGAAAAGAATGGTTTCTGTAATTGTTCATATCCA  700

seq1  GGCCAATCTCAGGGAATCAGATGCACTCTGAGTGTCCTTATTACGTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATCTCAGGGAATCAGATGCACTCTGAGTGTCCTTATTACGTTCTG  750

seq1  TGAATGGTTAAATATATGGAACCAGAGATGGTGATGGCTTTGAGAACCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGTTAAATATATGGAACCAGAGATGGTGATGGCTTTGAGAACCAG  800

seq1  CAGGAA-GGATGGGAATCACTATTTAAT-GGTCATAGAGTTTCAGCTGAC  848
      |||||| ||||||||||||||||||||| |||||||||||||||||||||
seq2  CAGGAAGGGATGGGAATCACTATTTAATGGGTCATAGAGTTTCAGCTGAC  850

seq1  GGTGCTGAGGAAGATTCTGGAGATGGGTGGACGAGAAGACTGTATAACAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGTGCTGAGGAAGATTCTGGAGATGGGTGGACGAGAAGACTGTATAACAG  900

seq1  GGGCAAGGGCAGAGTATCATGAAATGTGCACTTTTAAAAAGGATGAACAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAAGGGCAGAGTATCATGAAATGTGCACTTTTAAAAAGGATGAACAT  950

seq1  AGTACTACTTCTACCATCATCACATCAGGGCAGCTCCTCCAACTTTTTAC  998
      ||||||||||||||||||||||||||| |||||||| ||  |||||||||
seq2  AGTACTACTTCTACCATCATCACATCA-GGCAGCTCTTC--ACTTTTTAC  997

seq1  AGATGTTTAGACACTAATAAGCTCAAGGAAAGGAGATGACAGAACACATT  1048
      ||||||||||||||||   ||||||||  ||||||||||| |||||||||
seq2  AGATGTTTAGACACTA--TAGCTCAAG--AAGGAGATGAC-GAACACATT  1042

seq1  CTCTGATAGTCAAGAACTAAGCACATTTATTAAATCTATTGCCAC-TTTC  1097
      |||||| |||||   ||| |||| ||| ||  ||||||||  ||| ||||
seq2  CTCTGA-AGTCA--GACT-AGCA-ATTAAT--AATCTATTTGCACTTTTC  1085

seq1  TCAGCACATCATTGTAAATGGTTTCCATTTTTTTTTTATATCCAGCTT  1145
      ||||  ||||| ||||||||| |||||    || ||||||| ||||||
seq2  TCAG--CATCAATGTAAATGG-TTCCA----TTCTTTATAT-CAGCTT  1125