BAC Information

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BAC

Clone NameB6Ng01-016I21
Chromosome16 (Build37)
Map Location 62,451,774 - 62,452,928
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016I21.bB6Ng01-016I21.g
ACCDH850486DH850487
length7811,136
definitionDH850486|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I21, 5' end.DH850487|Mus musculus domesticus DNA, BAC clone: B6Ng01-016I21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataaatgctgctgactgctctctctctctctctctctctctct
ctctctctctctctctctctctctctctctctctctcgtgtggggggggg
ggggtatgccatttgtaagccacccacttcaacatttttgttttattgca
tctcaaatagcccaacaaagtgaaaaacagaggggttgtgtttttttttc
tctatagaactctctctctctgcgatgaaaagaaatggggataaatatat
tttttgggtatctgtcagagaggagatggaggggaatatatgtgtaactg
ttttttctatatatgtgtaaaaaagaaagcaaacaaaataaacaaatata
acacacactctcactctccccctttcccccccctttagagctcgcaagag
tgtgtgtgtgtctgtgtggggcacactctcttctctttgtgtatctataa
atattaccccccccccttatttttctattcagatgttgtataaatatgtg
tgtgtatggagagaaaaaaagagagagacactctcactcactaaaacaaa
agagatctcgcgtgaacaaaaaaactctttttccctaacctacaatgaga
gatatctctcgctgtctctatacacgcacgcgcgcgcgcgcgcgcttctc
tccccaccgtgagagggcgcatatagagagtgtgtttttatatatgtgag
tctgtattatatatatataatatatctatatgtatatatgtacactacac
atatgtaagaaagatagttctcgtacagctt

gaattcatggttttgatagaaattatcatattcttcctgagaacgtactc
acagtttatttacctacaagttatcagattattaatatatattcctcaaa
ttactactcatgtttttaaattcatgttttcgtcataagtacaaatcata
tgatgattctgaaggcacattgtcttatttcaacacaattctggggggaa
agtttaacttcgtgaaacatataattttacctattatataaccttataaa
atagatataaatttatctatattttaataactcagtttaggaaataaaat
cgtatttttactacttcaggtaacagtaacaaatggttaagttgttatcc
tcctttaccaactggatataagccaggggcatctctggtttcctttctga
gctgaattaagttgctcagtgagtcactgacctgatgaaggcacaaacac
ttcctagcttattatatgcataaagattttgataaagaatataaaggaac
agataaaaaacatgtataagcaggccctggaaaggcactaattacacatg
tattctcttcactgccaacctgcacacatctccatgtgttgaacaattca
aaagttgttggaactttatccctttaggtttttgatggaggatcatctga
actagtcatggaagattacatcactgggcagtttgttaggagatgggagt
aaaagactcagaagttagtttccgtggcaattacccctcatgctatggtt
attcgggagcccatttgcatcaaccccacagtgatgtgaagaaagtacaa
agggaggcaggattaggggggtcagggtgcttctataacctaggaaacta
aagaccttaggaagctggagtcaggaagtaggaccaaagaaaggtcaaat
gtgagaacagaagatgactgtagtgcccctatggataggatcatttagat
cagtgtatacacatgcacaatggcacactttgttatttccctttagccta
tagttgttgttgttgtctatttgcgtacctgtatgaaactcaactattct
tttaattttttctatcattttaaaaactaggaggctgatgaaacgaagaa
aaaggcagtcttggggccacatacttcaacttcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_62451774_62452928
seq2: B6Ng01-016I21.g_66_1201 (reverse)

seq1  CAAGAATTAGAAGTATGT-GCCACAAGACTTGGCTTTTTCTTCTGTTTCA  49
      |||||| | ||||||||| ||| |||||| || |||||||||| ||||||
seq2  CAAGAAGTTGAAGTATGTGGCCCCAAGAC-TGCCTTTTTCTTC-GTTTCA  48

seq1  TCAGCTTTCCTAGTATTTATAATGATAAGGAAAAAAAATAAAAAGAATAG  99
      |||||  ||||||| |||| ||||||    | ||||||| ||||||||||
seq2  TCAGC-CTCCTAGTTTTTAAAATGAT----AGAAAAAATTAAAAGAATAG  93

seq1  TTGGAAGTTTCATTACAGGTACACCAAAATAGACAAACAACAACAAACTA  149
      |||  ||||||| ||||||||| |  |||||||| ||||||||| |||||
seq2  TTG--AGTTTCA-TACAGGTACGC--AAATAGAC-AACAACAAC-AACTA  136

seq1  TAAGGCTAAAGGGGAAATAACAAAGTGTGCCATTGTGGCATGTGTATACA  199
      | |||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  T-AGGCTAAA-GGGAAATAACAAAGTGTGCCATTGT-GCATGTGTATACA  183

seq1  CTGATCTTAAATGATCCCTTATCCATAGGGGCACTACAGTCATCTTCTGT  249
      |||||| ||||||||||  |||||||||||||||||||||||||||||||
seq2  CTGATC-TAAATGATCC--TATCCATAGGGGCACTACAGTCATCTTCTGT  230

seq1  TCTCACATTTGACCTTTCTTTGGTCCTACTTCCTGACTCCAGCTTCCTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACATTTGACCTTTCTTTGGTCCTACTTCCTGACTCCAGCTTCCTAA  280

seq1  GGTCTTTAGTTTCCTAGGTTATAGAAGCACCCTGACCCCCTTAATCCTGC  349
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGTCTTTAGTTTCCTAGGTTATAGAAGCACCCTGACCCCCCTAATCCTGC  330

seq1  CTCCCTTTGTACTTTCTTCACATCACTGTGGGGTTGATGCAAATGGGCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTTGTACTTTCTTCACATCACTGTGGGGTTGATGCAAATGGGCTC  380

seq1  CCGAATAACCATAGCATGAGGGGTAATTGCCACGGAAACTAACTTCTGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATAACCATAGCATGAGGGGTAATTGCCACGGAAACTAACTTCTGAG  430

seq1  TCTTTTACTCCCATCTCCTAACAAACTGCCCAGTGATGTAATCTTCCATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTACTCCCATCTCCTAACAAACTGCCCAGTGATGTAATCTTCCATG  480

seq1  ACTAGTTCAGATGATCCTCCATCAAAAACCTAAAGGGATAAAGTTCCAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTCAGATGATCCTCCATCAAAAACCTAAAGGGATAAAGTTCCAAC  530

seq1  AACTTTTGAATTGTTCAACACATGGAGATGTGTGCAGGTTGGCAGTGAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTGAATTGTTCAACACATGGAGATGTGTGCAGGTTGGCAGTGAAG  580

seq1  AGAATACATGTGTAATTAGTGCCTTTCCAGGGCCTGCTTATACATGTTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACATGTGTAATTAGTGCCTTTCCAGGGCCTGCTTATACATGTTTT  630

seq1  TTATCTGTTCCTTTATATTCTTTATCAAAATCTTTATGCATATAATAAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGTTCCTTTATATTCTTTATCAAAATCTTTATGCATATAATAAGC  680

seq1  TAGGAAGTGTTTGTGCCTTCATCAGGTCAGTGACTCACTGAGCAACTTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGTGTTTGTGCCTTCATCAGGTCAGTGACTCACTGAGCAACTTAA  730

seq1  TTCAGCTCAGAAAGGAAACCAGAGATGCCCCTGGCTTATATCCAGTTGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTCAGAAAGGAAACCAGAGATGCCCCTGGCTTATATCCAGTTGGT  780

seq1  AAAGGAGGATAACAACTTAACCATTTGTTACTGTTACCTGAAGTAGTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGGATAACAACTTAACCATTTGTTACTGTTACCTGAAGTAGTAAA  830

seq1  AATACGATTTTATTTCCTAAACTGAGTTATTAAAATATAGATAAATTTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACGATTTTATTTCCTAAACTGAGTTATTAAAATATAGATAAATTTAT  880

seq1  ATCTATTTTATAAGGTTATATAATAGGTAAAATTATATGTTTCACGAAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTTATAAGGTTATATAATAGGTAAAATTATATGTTTCACGAAGT  930

seq1  TAAACTTTCCCCCCAGAATTGTGTTGAAATAAGACAATGTGCCTTCAGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTTTCCCCCCAGAATTGTGTTGAAATAAGACAATGTGCCTTCAGAA  980

seq1  TCATCATATGATTTGTACTTATGACGAAAACATGAATTTAAAAACATGAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATATGATTTGTACTTATGACGAAAACATGAATTTAAAAACATGAG  1030

seq1  TAGTAATTTGAGGAATATATATTAATAATCTGATAACTTGTAGGTAAATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATTTGAGGAATATATATTAATAATCTGATAACTTGTAGGTAAATA  1080

seq1  AACTGTGAGTACGTTCTCAGGAAGAATATGATAATTTCTATCAAAACCAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGAGTACGTTCTCAGGAAGAATATGATAATTTCTATCAAAACCAT  1130

seq1  GAATTC  1155
      ||||||
seq2  GAATTC  1136


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