BAC Information

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BAC

Clone NameB6Ng01-016P03
Chromosome16 (Build37)
Map Location 50,071,338 - 50,198,885
singlet/doubletdoublet
Overlap geneEG667802, LOC100043404, Bbx
Upstream geneMyh15, 1700026J12Rik, LOC386061, EG216818, LOC628903, Ift57, LOC667796, LOC100043767, Cd47, EG433024, LOC100043769, LOC628951, EG224180
Downstream geneLOC100043414, Ccdc54, LOC672778, 5330426P16Rik, EG639820
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016P03.bB6Ng01-016P03.g
ACCDH850767DH850768
length1,080408
definitionDH850767|Mus musculus domesticus DNA, BAC clone: B6Ng01-016P03, 5' end.DH850768|Mus musculus domesticus DNA, BAC clone: B6Ng01-016P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,197,809 - 50,198,885)(50,071,338 - 50,071,751)
sequence
gaattctgaccctgtccagcaaggccatgcttgcctttgtacatcctcac
aggtgaattgctgttcctctttctagcccctgtgtttagtcccctgctct
cagacaccctcctcctgcctcatgcaagggtatgtgtacctttctgagac
cagctgcatgttgggttataaatatatctgctgatatttcatctccttga
aacattttgaaaacaaagcattggttttattttttggtgtcctggcttag
gtggctcctgttctagcaggagaatagatgagctagctcccagtgtgtgg
ctccctaactgtgtagggataggaaaatactatgtgtaagacttttctgt
tactttccactagaacagcatcgattactaacgtaatgccactagcctaa
caaatgttctttctattttcttcgttttcttttttccttttccagtattc
cctaaaattcttttaagtacaaataataatgaaggttataaaccagtggg
ttaaatccatttttctcaaagaaagtgctaaacctattggccagttagta
cttaacagcaaccatacatgaatgagcaagtaaatagaaatttggcccta
gtatgtattctgtttttaaaatctttaatatcgtgtatacttctagtatt
ctatataacagagttacttttcttttttgcacactaagagaaatgtgggt
ataattataaaagcaggttttgctgcattttaaaatcttatcctgtgtgt
cctgaagaactttattgggagtgagacccgtggaaacactgctgtctttt
cagctgttttcagtgctgtgttgtgcaccataggccagggcagggggcag
cctcagtgtgcttgtccgggcatggcaggcttgttatggtaacaagaaaa
tacattgttaagtggttggaagggtcgggggaacacatgacttttcagaa
aaggaagaagaggaaaggcaagagtaaaattctaaggacaatccagcttt
aattaaagaactaaatagcaattaattattattgagtggggacatggaaa
gttctattcactcaatggttccttgcctat
aacgaatcaaattgagcattatggctttaatttattcagaatgctttgat
gaatacttaacttaattctaacttttcattttagccagtaatgctatgat
aaatattttattgcagacacacatctttgtatacgtacacttttttcccc
tggaagaaactgctaaaaattaaattcctttgtgtaaagtacccataaac
attttttttttacatttggtaaatgttagttttatttatactttattcaa
caaatatctattagtgagttgctaccgtgtaactctggatcctctggtcc
ccttaaataatttaattagagatataaaaaaacaggatagatcataagta
gtatgacatctcagagaaggtttgggtggctcagaaagtcttgtgggagt
ctgggttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_50197809_50198885
seq2: B6Ng01-016P03.b_45_1124 (reverse)

seq1  ATAGGCAAGG-ACCAATGAGTGATAGGAACTTTCCATTGTCCCACTCAAT  49
      |||||||||| |||| |||||||   |||||||||||   ||||||||||
seq2  ATAGGCAAGGAACCATTGAGTGAATAGAACTTTCCATGTCCCCACTCAAT  50

seq1  AATAATTAATTGCTATTTAGTTCTTTAATTAAAGCTGGATTTGTCCTTAG  99
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AATAATTAATTGCTATTTAGTTCTTTAATTAAAGCTGGA-TTGTCCTTAG  99

seq1  AATTTTACTCTTGCC-TTCCTCTTCTTTCTTTTCTGAAAAGTCATGTGTT  148
      ||||||||||||||| ||||||||||| ||||||||||||||||||||||
seq2  AATTTTACTCTTGCCTTTCCTCTTCTTCCTTTTCTGAAAAGTCATGTGTT  149

seq1  CCCCCGACCCTTCCAACCACTTAACAATGTATTTTCTTGTTACCATAACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGACCCTTCCAACCACTTAACAATGTATTTTCTTGTTACCATAACA  199

seq1  AGCCTGCCATGCCCGGACAAGCACACTGAGGCTG-CCCCTGCCCTGGCCT  247
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCCTGCCATGCCCGGACAAGCACACTGAGGCTGCCCCCTGCCCTGGCCT  249

seq1  ATGGTGCACAACACAGCACTGAAAACAGCTGAAAAGACAGCAGTGTTTCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCACAACACAGCACTGAAAACAGCTGAAAAGACAGCAGTGTTTCC  299

seq1  ACGGGTCTCACTCCCAATAAAGTTCTTCAGGACACACAGGATAAGATTTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGTCTCACTCCCAATAAAGTTCTTCAGGACACACAGGATAAGATTTT  349

seq1  AAAATGCAGCAAAACCTGC-TTTATAATTATACCCACATTTCTCTTAGTG  396
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAAATGCAGCAAAACCTGCTTTTATAATTATACCCACATTTCTCTTAGTG  399

seq1  TGCAAAAAAGAAAAGTAACTCTGTTATATAGAATACTAGAAGTATACACG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAAAAGAAAAGTAACTCTGTTATATAGAATACTAGAAGTATACACG  449

seq1  ATATTAAAGATTTTAAAAACAGAATACATACTAGGGCCAAATTTCTATTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAGATTTTAAAAACAGAATACATACTAGGGCCAAATTTCTATTT  499

seq1  ACTTGCTCATTCATGTATGGTTGCTGTTAAGTACTAACTGGCCAATAGGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTCATTCATGTATGGTTGCTGTTAAGTACTAACTGGCCAATAGGT  549

seq1  TTAGCACTTTCTTTGAGAAAAATGGATTTAACCCACTGGTTTATAACCTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCACTTTCTTTGAGAAAAATGGATTTAACCCACTGGTTTATAACCTT  599

seq1  CATTATTATTTGTACTTAAAAGAATTTTAGGGAATACTGGAAAAGGAAAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTATTTGTACTTAAAAGAATTTTAGGGAATACTGGAAAAGGAAAA  649

seq1  AAGAAAACGAAGAAAATAGAAAGAACATTTGTTAGGCTAGTGGCATTACG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACGAAGAAAATAGAAAGAACATTTGTTAGGCTAGTGGCATTACG  699

seq1  TTAGTAATCGATGCTGTTCTAGTGGAAAGTAACAGAAAAGTCTTACACAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAATCGATGCTGTTCTAGTGGAAAGTAACAGAAAAGTCTTACACAT  749

seq1  AGTATTTTCCTATCCCTACACAGTTAGGGAGCCACACACTGGGAGCTAGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTCCTATCCCTACACAGTTAGGGAGCCACACACTGGGAGCTAGC  799

seq1  TCATCTATTCTCCTGCTAGAACAGGAGCCACCTAAGCCAGGACACCAAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTATTCTCCTGCTAGAACAGGAGCCACCTAAGCCAGGACACCAAAA  849

seq1  AATAAAACCAATGCTTTGTTTTCAAAATGTTTCAAGGAGATGAAATATCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACCAATGCTTTGTTTTCAAAATGTTTCAAGGAGATGAAATATCA  899

seq1  GCAGATATATTTATAACCCAACATGCAGCTGGTCTCAGAAAGGTACACAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATATATTTATAACCCAACATGCAGCTGGTCTCAGAAAGGTACACAT  949

seq1  ACCCTTGCATGAGGCAGGAGGAGGGTGTCTGAGAGCAGGGGACTAAACAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGCATGAGGCAGGAGGAGGGTGTCTGAGAGCAGGGGACTAAACAC  999

seq1  AGGGGCTAGAAAGAGGAACAGCAATTCACCTGTGAGGATGTACAAAGGCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTAGAAAGAGGAACAGCAATTCACCTGTGAGGATGTACAAAGGCA  1049

seq1  AGCATGGCCTTGCTGGACAGGGTCAGAATTC  1077
      |||||||||||||||||||||||||||||||
seq2  AGCATGGCCTTGCTGGACAGGGTCAGAATTC  1080

seq1: chr16_50071338_50071751
seq2: B6Ng01-016P03.g_64_477

seq1  GAATTCAACGAATCAAATTGAGCATTATGGCTTTAATTTATTCAGAATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGAATCAAATTGAGCATTATGGCTTTAATTTATTCAGAATGC  50

seq1  TTTGATGAATACTTAACTTAATTCTAACTTTTCATTTTAGCCAGTAATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGAATACTTAACTTAATTCTAACTTTTCATTTTAGCCAGTAATGC  100

seq1  TATGATAAATATTTTATTGCAGACACACATCTTTGTATACGTACACTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAAATATTTTATTGCAGACACACATCTTTGTATACGTACACTTTT  150

seq1  TTCCCCTGGAAGAAACTGCTAAAAATTAAATTCCTTTGTGTAAAGTACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGGAAGAAACTGCTAAAAATTAAATTCCTTTGTGTAAAGTACCC  200

seq1  ATAAACATTTTTTTTTTACATTTGGTAAATGTTAGTTTTATTTATACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATTTTTTTTTTACATTTGGTAAATGTTAGTTTTATTTATACTTT  250

seq1  ATTCAACAAATATCTATTAGTGAGTTGCTACCGTGTAACTCTGGATCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACAAATATCTATTAGTGAGTTGCTACCGTGTAACTCTGGATCCTC  300

seq1  TGGTCCCCTTAAATAATTTAATTAGAGATATAAAAAAACAGGATAGATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCCCTTAAATAATTTAATTAGAGATATAAAAAAACAGGATAGATCA  350

seq1  TAAGTAGTATGACATCTCAGAGAAGGTTTGGGTGGCTCAGAAAGTCTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGTATGACATCTCAGAGAAGGTTTGGGTGGCTCAGAAAGTCTTGT  400

seq1  GGGAGTCTGGGTCC  414
      |||||||||||| |
seq2  GGGAGTCTGGGTTC  414