BAC Information

Click to search

BAC

Clone NameB6Ng01-017G19
Chromosome16 (Build37)
Map Location 82,072,626 - 82,073,195
singlet/doubletsinglet
Overlap genenone
Upstream geneNcam2, LOC621470, LOC435484, Pgk1-ps1
Downstream geneEG665260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017G19.bB6Ng01-017G19.g
ACCDH851114DH851115
length9111,029
definitionDH851114|Mus musculus domesticus DNA, BAC clone: B6Ng01-017G19, 5' end.DH851115|Mus musculus domesticus DNA, BAC clone: B6Ng01-017G19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgtcgtattaatttgcaaaagaattagctcacatatgaattc
tcaactttgctctctgttttgttttttttgtttgtttgtttttgtttttg
ttgttgttttctgtctgccttttgtttgtagtttctggcttaatggcaat
atgtcccttgtgtgtgtctgatctgctactatatgctgtgtccttgtgtg
aatggggtcactatgcgtatctgatgtctcaatgtgggtaacacagggtt
taggttcattgacagcacagaaaacttcacatggaggaggaaggagagtt
gctttaacagagatctttaacagattttaaaaggagtaagttatttaccc
aaaatgaccctgagcactgagtactgcgaatacaccatcattaaattata
cctatatcttttaatatttatgaatgaaattagttctgtaagattgtttt
caaactattggctattttaatcaaattattaacataatatagaaatgcaa
acacatgcatctctctgggttaaggacataatttaaagttaaggctctga
attaacttaggttgaaagttggctcctttgaaattcaaggccagaaggtt
gtctgttgcattgttcaattaaacacaggataaaacaaaactaaaacgta
ccaaccaaccaattagccaacgaaccaagcaaaaacaggcttactactca
gcaagatatcagtcttaagtctttagtgattatagcttatattaagaatt
tggctacacatttcagcaaatagtttcaagattttgaatccaagaggtat
taaaacaaaactaaaacaaaaacaaaaacaaaacaaaacaacaatgtatc
cccacagggtgggtagcagggtaacataacacagctaagaaagtcatata
gcaaatgtggt
gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaatcgggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagcgccattttcccggttcggaatcttcct
gagaagcaagcaataaagcttttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagcgggacgcaataagtggcgccgaagaacccggg
aactgtcatcacaccggcgcaaggaagatccctcgttcgcggggcagaat
cagaaccgtgggacaaaaggctctacaaggtacgtacaatcttgaaattt
cttcagagttagaagcccttttgattgtttgcacggcgattacacttttc
ctttcggtttcattttgtttccaccactggaactgctgactggttcttag
tcgcggtcaggcctggacagcgcctggacagtgaccaatttcagtcgcgg
tcaggcctggacagcggcagtatgggaatctcccattctatagtagtggc
cttatgctcggtcttgaagcagtgtggcctaaaaatcgccactaagacct
tagagggatttgtcagagagatagaccgtgtcacaccatggtatgcttgc
tcagggtcattaactgtcgcctcgtgggacaaactgaaaggagatctagt
tagggaacagcagaaaggcaaacttaaagcagggattatgccgctatgga
aattggtgaaatcgtgtttaacagatgaggattgtcagcaaatggtagaa
gcggggcagaaagtcctggacaaattcaaataaagtctatcagaggtaga
gcggggagagaaagtaaaagtgagaggaaaccaaagtgcactgaagattt
tggccttttccacgggtcttgagcccgaggaaagagaattaaagggaaaa
atgtctttgggaaagaataaaaaaagggatgggaagggataaatagaagg
aacatcagctggagagctcattagataat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_82072626_82073195
seq2: B6Ng01-017G19.b_391_958

seq1  TTTACCCAAAATGACCCTGAGCACTGAGTACTGCGAATACACCATCATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCAAAATGACCCTGAGCACTGAGTACTGCGAATACACCATCATTA  50

seq1  AATTATACCTATATCTTTTAATATTTATGAATGAAATTAGTTCTGTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATACCTATATCTTTTAATATTTATGAATGAAATTAGTTCTGTAAGA  100

seq1  TTGTTTTCAAACTATTGGCTATTTTAATCAAATTATTAACATAATATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCAAACTATTGGCTATTTTAATCAAATTATTAACATAATATAGA  150

seq1  AATGCAAACACATGCATCTCTCTGGGTTAAGGACATAATTTAAAGTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAAACACATGCATCTCTCTGGGTTAAGGACATAATTTAAAGTTAAG  200

seq1  GCTCTGAATTAACTTAGGTTGAAAGTTGGCTCCTTTGAAATTCAAGGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGAATTAACTTAGGTTGAAAGTTGGCTCCTTTGAAATTCAAGGCCA  250

seq1  GAAGGTTGTCTGTTGCATTGTTCAATTAAACACAGGATAAAACAAAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTGTCTGTTGCATTGTTCAATTAAACACAGGATAAAACAAAACTA  300

seq1  AAACGTACCAACCAACCAATTAGCCAACGAACCAAGCAAAAACAGGCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTACCAACCAACCAATTAGCCAACGAACCAAGCAAAAACAGGCTTA  350

seq1  CTACTCAGCAAGATATCAGTCTTAAGTCTTTAGTGATTATAGCTTATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAGCAAGATATCAGTCTTAAGTCTTTAGTGATTATAGCTTATATT  400

seq1  AAGAATTTGGCTACACATTTCAGCAAATAGTTTCAAGATTTTGAATCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTGGCTACACATTTCAGCAAATAGTTTCAAGATTTTGAATCCAA  450

seq1  GAGGTATTAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAAAACAA  500
      ||||||||||||| ||||| ||||||||||||||||| ||||||||||||
seq2  GAGGTATTAAAAC-AAAACTAAAACAAAAACAAAAAC-AAAACAAAACAA  498

seq1  CAATGTATCCCCACAGGGTGGGTAGCAGGGTAACATAGCACAGCTAAGAA  550
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAATGTATCCCCACAGGGTGGGTAGCAGGGTAACATAACACAGCTAAGAA  548

seq1  AGTCATATAGCAAATGTGTT  570
      |||||||||||||||||| |
seq2  AGTCATATAGCAAATGTGGT  568