BAC Information

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BAC

Clone NameB6Ng01-018K07
Chromosome16 (Build37)
Map Location 55,357,183 - 55,455,974
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043449, LOC667927, LOC436421, Zpld1
Downstream geneNfkbiz, Gm1752, Lrriq2, EG667966, LOC629242, Rpl24, Zbtb11, Pcnp, Rg9mtd1, Senp7, Impg2, LOC672835
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018K07.bB6Ng01-018K07.g
ACCDH851985DH851986
length1,1441,205
definitionDH851985|Mus musculus domesticus DNA, BAC clone: B6Ng01-018K07, 5' end.DH851986|Mus musculus domesticus DNA, BAC clone: B6Ng01-018K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,357,183 - 55,358,335)(55,454,755 - 55,455,974)
sequence
gaattccaagtatttttaacagaatattttgacaagaaatgcagatgaga
tggctcagcagttaaaagcacttgctgctcttgtaaagtacagagcattg
gtccataccacccacatggcagctaacaagcacgtacaactgcaatttca
gggatccaaagcctttttctggcagccccaagcatgaggcacacacctgg
tgcacatacacacatgcagtgaaaacactcacgtgtataaaataacaata
agcaaatcatctttaaagcttaaaaagaagagcatttaattcatgtttgt
gtttctctaatagtcaaaaacacaaaaagcagttgaataataaattcaat
acaataagcaaattgataggcatttaataaactagaaaatgcaccaacta
gctaagaaacccaatcccataatgccagctttcatttccaatattctcca
ggtggctgctagccatttgccacacaggaaaaacaacaacagcagcaaca
acaaaaatacaaaaatgaacaaaaacaaaaacaaaaccctgtcacttact
ggaaagcaggctccaactattaaaaataaataaataaataagaaaggcac
acagtagagaatagacaatgttgtgctaaaaaggctgtgtaattttgcca
aaaaaaaaaatttaatctgtgcacaaaatacctctcccattcttttgatc
tgctgcagcacttgtccaaatggatgggctccctaaagggaaaacccatt
tcaaacactgaggagcttgaacaaatgggaagcactcaacctcgggctta
aatatcccaaatggtctcttgctggtaacatgagaacaaaatcagagtct
cactcagaaaacagcttccctggcttttttccccgggtccatttgtgcat
tgatactaagatcagagtcgtcaacttgaatgttgattggagtctcgata
caaacaatgagacattaaacacttttggttttctgaaatttgtattcaga
ctcttcttttttttttcagggataatcacagtcccatcagtatttgaggg
aatttgtgcaacacaggatgcctctgtcaaatgtagcaagctatgcattc
cattatagttgctgtgcaattacttcctaagaggaaagcgaact
gaattcttttatataaaaagtattgttagagtgaatatgaacgtaatatt
ttcatatttggtgctgtgatcttaaaagttgcagccaacaggaatacatc
atctatatttgaactttcttctttcataagcacagtagtcactaaccttg
gattaaatacaagaatgaatgtgcttccaatcattgaggtgacaaatgaa
tataagcataactggaaagaaaagaattattcagtgaaatcttgttttta
tttaaatgaaaaaagtaggagagatgaaatgctccactttgtgtataatt
aaagtggagttttagttggggaatattgctctatgatttatataaccccc
cacctctctgttggaagcatcagatcataggttttgatttaagaaatgac
accttcacaaagacagggaacgtttaaaataagaaaagaaaatctcacaa
tgcattcaaactcatatagacttgtcttggttctatactattatattttt
ttatgtgactgatcattccttcaagtcctgtcacatgcattaatttataa
accgccatatctcagttacttctctgcaaagtgaagttgaaggtactaat
tctcctttcaaagatattgttaagaaaaaatggttaaatgattatgaata
tccattaattttaagtgtcctctatgtccttaacaacaaagattaattca
cttaattttttttttccatgtgtgaaatttcttttaaggtggaagccaat
tctaaatataagaatgaaacatgtgataggggacattgtcactactaact
tgtttacttttatgatgcttgggaaaatcattgacctttcctcctgacgc
cgtacaactgggctactaatgaaacatgtgtaggcacacgacccctatgt
tagtgtttttaccttccacgcataccatataccttccaatgttttcttta
ccagtgagatgtgaaaaactgaaaagaaattgtactattattgcatggtt
cagcatcctaagacagatgaacagcatccatctcatatttcttggaccta
tgggaaagccgtgaatgctcactccttcatgctgctatggctgtgctatt
ggatttgacatgggattagcccactgtctttcgtctaacgcttgtctgtc
cacgtggcaattcagttccacatcttgcatttcctctcaggttccttgga
tcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_55357183_55358335
seq2: B6Ng01-018K07.b_42_1185

seq1  GAATTCCAAGTATTTTTAACAGAATATTTTGACAAGAAATGCAGATGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGTATTTTTAACAGAATATTTTGACAAGAAATGCAGATGAGA  50

seq1  TGGCTCAGCAGTTAAAAGCACTTGCTGCTCTTGTAAAGTACAGAGCATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGCAGTTAAAAGCACTTGCTGCTCTTGTAAAGTACAGAGCATTG  100

seq1  GTCCATACCACCCACATGGCAGCTAACAAGCACGTACAACTGCAATTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATACCACCCACATGGCAGCTAACAAGCACGTACAACTGCAATTTCA  150

seq1  GGGATCCAAAGCCTTTTTCTGGCAGCCCCAAGCATGAGGCACACACCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCCAAAGCCTTTTTCTGGCAGCCCCAAGCATGAGGCACACACCTGG  200

seq1  TGCACATACACACATGCAGTGAAAACACTCACGTGTATAAAATAACAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATACACACATGCAGTGAAAACACTCACGTGTATAAAATAACAATA  250

seq1  AGCAAATCATCTTTAAAGCTTAAAAAGAAGAGCATTTAATTCATGTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATCATCTTTAAAGCTTAAAAAGAAGAGCATTTAATTCATGTTTGT  300

seq1  GTTTCTCTAATAGTCAAAAACACAAAAAGCAGTTGAATAATAAATTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTAATAGTCAAAAACACAAAAAGCAGTTGAATAATAAATTCAAT  350

seq1  ACAATAAGCAAATTGATAGGCATTTAATAAACTAGAAAATGCACCAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAAGCAAATTGATAGGCATTTAATAAACTAGAAAATGCACCAACTA  400

seq1  GCTAAGAAACCCAATCCCATAATGCCAGCTTTCATTTCCAATATTCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAAACCCAATCCCATAATGCCAGCTTTCATTTCCAATATTCTCCA  450

seq1  GGTGGCTGCTAGCCATTTGCCACACAGGAAAAACAACAACAGCAGCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTGCTAGCCATTTGCCACACAGGAAAAACAACAACAGCAGCAACA  500

seq1  ACAAAAATACAAAAATGAACAAAAACAAAAACAAAACCCTGTCACTTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATACAAAAATGAACAAAAACAAAAACAAAACCCTGTCACTTACT  550

seq1  GGAAAGCAGGCTCCAACTATTAAAAATAAATAAATAAATAAGAAAGGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCAGGCTCCAACTATTAAAAATAAATAAATAAATAAGAAAGGCAC  600

seq1  ACAGTAGAGAATAGACAATGTTGTGCTAAAAAGGCTGTGTAATTTTGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAGAGAATAGACAATGTTGTGCTAAAAAGGCTGTGTAATTTTGCCA  650

seq1  AAAAAAAAAATTTAATCTGTGCACAAAATACCTCTCCCATTCTTTTGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAATTTAATCTGTGCACAAAATACCTCTCCCATTCTTTTGATC  700

seq1  TGCTGCAGCACTTGTCCAAATGGATGGGCTCCCTAAAGGGAAAACCCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAGCACTTGTCCAAATGGATGGGCTCCCTAAAGGGAAAACCCATT  750

seq1  TCAAACACTGAGGAGCTTGAACAAATGGGAAGCACTCAACCTCGGGCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACTGAGGAGCTTGAACAAATGGGAAGCACTCAACCTCGGGCTTA  800

seq1  AATATCCCAAATGGTCTCTTGCTGGTAACATGAGAACAAAATCAGAGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCCAAATGGTCTCTTGCTGGTAACATGAGAACAAAATCAGAGTCT  850

seq1  CACTCAGAAAACAGCTTCCCTGGCTTTTATCCCCGGTTCCATTTGTGCAT  900
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  CACTCAGAAAACAGCTTCCCTGGCTTTTTTCCCCGGGTCCATTTGTGCAT  900

seq1  TGATACTAAGATCAGAGTCGTCAACTTGAATGTGATTTGGAGTCTCGATA  950
      |||||||||||||||||||||||||||||||||   ||||||||||||||
seq2  TGATACTAAGATCAGAGTCGTCAACTTGAATGTTGATTGGAGTCTCGATA  950

seq1  CAAACAATGAGACATTAAACACTTTTTGGTTTTCTGAAATTTGTATTCAG  1000
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAAACAATGAGACATTAAACAC-TTTTGGTTTTCTGAAATTTGTATTCAG  999

seq1  ACTCTTCTTTTTTTTTTCAGGGTATAATCACAGTCCCATCAGTATTTGAG  1050
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACTCTTCTTTTTTTTTTCAGGG-ATAATCACAGTCCCATCAGTATTTGAG  1048

seq1  GG-ATTTGTGCAACACAGGATGCCTCTGTCAAAATTGTAGCAAGCTAATG  1099
      || ||||||||||||||||||||||||||||||  ||||||||||| |||
seq2  GGAATTTGTGCAACACAGGATGCCTCTGTCAAA--TGTAGCAAGCT-ATG  1095

seq1  CATTCCAATATAGCTTGCTTGTGCAAATTACTTCCTAAGAGGAAAGCCGG  1149
      ||||||| ||||| |||| ||||| ||||||||||||||||||||||  |
seq2  CATTCCATTATAG-TTGC-TGTGC-AATTACTTCCTAAGAGGAAAGC--G  1140

seq1  AACT  1153
      ||||
seq2  AACT  1144

seq1: chr16_55454755_55455974
seq2: B6Ng01-018K07.g_70_1274 (reverse)

seq1  AAAGATCCAAGG-ACTTTGGAAGGAATGCAAG-TGTGGCAACTTGGATAT  48
      |||||||||||| || |  || | |||||||| ||||| ||||  ||  |
seq2  AAAGATCCAAGGAACCTGAGAGGAAATGCAAGATGTGG-AACT--GAATT  47

seq1  GCCCCAGTGGACAGACAGACTGCTGTGACAGCAATGGCCAGTGGGCTAAA  98
      ||| | |||||||||||  |    || | | | |  | ||||||||| ||
seq2  GCCAC-GTGGACAGACAAGC----GTTAGA-CGAAAGACAGTGGGCT-AA  90

seq1  TCCCAGTGTCAAAGTCAAACTAAGCACAGCCATAGACGCATGAAGAGATG  148
      ||||| |||||||  |||    |||||||||||||  |||||||| ||  
seq2  TCCCA-TGTCAAATCCAA---TAGCACAGCCATAGCAGCATGAAG-GAGT  135

seq1  AAGCA-TCACGGGCTTTCCCATAGGTCCAAGATAGATATGAGAATGGGAT  197
       |||| |||| ||||||||||||||||||||  | ||||||||   ||||
seq2  GAGCATTCAC-GGCTTTCCCATAGGTCCAAG--AAATATGAGA--TGGAT  180

seq1  GCTGTTCATCTGTC-TAGGATGCTGAACCACTGCAATAATAGTACAATTT  246
      |||||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  GCTGTTCATCTGTCTTAGGATGCTGAACCA-TGCAATAATAGTACAATTT  229

seq1  CTTTTTCAGTTTTTCACATCTCACTGGTAAAG-AAACATTGGAAGGTATA  295
      | |||||||||||||||||||||||||||||| |||||||||||||||||
seq2  C-TTTTCAGTTTTTCACATCTCACTGGTAAAGAAAACATTGGAAGGTATA  278

seq1  TGGTATGCGTGG-AGGTAAAAACACTAACATAGGGGTCGTGTGCCTACAC  344
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGGTATGCGTGGAAGGTAAAAACACTAACATAGGGGTCGTGTGCCTACAC  328

seq1  ATGTTTCATTAGTAGCCCAGTTGTACGGCGTCAGGAGG-AAGGTCAATGA  393
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ATGTTTCATTAGTAGCCCAGTTGTACGGCGTCAGGAGGAAAGGTCAATGA  378

seq1  TTTTCCCAAGCATCATAAAAGTAAACAAGTTAGTAGTGACAATGTCCCCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCAAGCATCATAAAAGTAAACAAGTTAGTAGTGACAATGTCCCCT  428

seq1  ATCACATGTTTCATTCTTATATTTAGAATTGGCTTCCACCTTAAAAGAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATGTTTCATTCTTATATTTAGAATTGGCTTCCACCTTAAAAGAAA  478

seq1  TTTCACACATGGAAAAAAAAAATTAAGTGAATTAATCTTTGTTGTTAAGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACATGGAAAAAAAAAATTAAGTGAATTAATCTTTGTTGTTAAGG  528

seq1  ACATAGAGGACACTTAAAATTAATGGATATTCATAATCATTTAACCATTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGGACACTTAAAATTAATGGATATTCATAATCATTTAACCATTT  578

seq1  TTTCTTAACAATATCTTTGAAAGGAGAATTAGTACCTTCAACTTCACTTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTAACAATATCTTTGAAAGGAGAATTAGTACCTTCAACTTCACTTT  628

seq1  GCAGAGAAGTAACTGAGATATGGCGGTTTATAAATTAATGCATGTGACAG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAAGTAACTGAGATATGGCGGTTTATAAATTAATGCATGTGACAG  678

seq1  GACTTGAAGGAATGATCAGTCACATAAAAAAATATAATAGTATAGAACCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAAGGAATGATCAGTCACATAAAAAAATATAATAGTATAGAACCA  728

seq1  AGACAAGTCTATATGAGTTTGAATGCATTGTGAGATTTTCTTTTCTTATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGTCTATATGAGTTTGAATGCATTGTGAGATTTTCTTTTCTTATT  778

seq1  TTAAACGTTCCCTGTCTTTGTGAAGGTGTCATTTCTTAAATCAAAACCTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACGTTCCCTGTCTTTGTGAAGGTGTCATTTCTTAAATCAAAACCTA  828

seq1  TGATCTGATGCTTCCAACAGAGAGGTGGGGGGTTATATAAATCATAGAGC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGATGCTTCCAACAGAGAGGTGGGGGGTTATATAAATCATAGAGC  878

seq1  AATATTCCCCAACTAAAACTCCACTTTAATTATACACAAAGTGGAGCATT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCCCCAACTAAAACTCCACTTTAATTATACACAAAGTGGAGCATT  928

seq1  TCATCTCTCCTACTTTTTTCATTTAAATAAAAACAAGATTTCACTGAATA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCTCCTACTTTTTTCATTTAAATAAAAACAAGATTTCACTGAATA  978

seq1  ATTCTTTTCTTTCCAGTTATGCTTATATTCATTTGTCACCTCAATGATTG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTTCTTTCCAGTTATGCTTATATTCATTTGTCACCTCAATGATTG  1028

seq1  GAAGCACATTCATTCTTGTATTTAATCCAAGGTTAGTGACTACTGTGCTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACATTCATTCTTGTATTTAATCCAAGGTTAGTGACTACTGTGCTT  1078

seq1  ATGAAAGAAGAAAGTTCAAATATAGATGATGTATTCCTGTTGGCTGCAAC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGAAGAAAGTTCAAATATAGATGATGTATTCCTGTTGGCTGCAAC  1128

seq1  TTTTAAGATCACAGCACCAAATATGAAAATATTACGTTCATATTCACTCT  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGATCACAGCACCAAATATGAAAATATTACGTTCATATTCACTCT  1178

seq1  AACAATACTTTTTATATAAAAGAATTC  1220
      |||||||||||||||||||||||||||
seq2  AACAATACTTTTTATATAAAAGAATTC  1205