BAC Information

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BAC

Clone NameB6Ng01-023L03
Chromosome16 (Build37)
Map Location 62,445,707 - 62,446,782
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19, Pros1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023L03.bB6Ng01-023L03.g
ACCDH855541DH855542
length1,0831,071
definitionDH855541|Mus musculus domesticus DNA, BAC clone: B6Ng01-023L03, 5' end.DH855542|Mus musculus domesticus DNA, BAC clone: B6Ng01-023L03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttttaatggggttatttgat
tttctgaagtccaccttcttgagttctttatatatatgttggatattagt
cccctatctgatttaggataggtaaagatcctttcccaatctgttggtgt
tctttttgtcttattgacggtgtcttttgacttgcagaaactttggagtt
tctttaggtcccatttgttaattatcgatcttacagcacaagccattgct
gttctcttcaggaatttttcccctgtgcccatattttcaaggctttcccc
cactttctcctctataagtttcagtgtctctggttttaagtgaagttcct
tgatccacttagatttgaccttagtacaaggagataagtatggatcgatt
cgcattcttctacatgagaacaaccagttgtgccagaaccaattgttgaa
aatgctgtctttgttccactggatggttttagctcccttgtcgaagatca
agtgaccataggtgtgtgggttcatttctgggtcttcaattctattccat
tggtctacttgtctgtctctataccagtaccatgcagtttttatcacaat
tactctgtagtatagctttaggtcaggcatggtgattctaccagaggttc
ttttatccttgagaagactttttgctatcctaggttttttgttattccag
atgaatttgcaaattgctccttctaattcgttgaagaattgagttggaat
tttgatggggattgcatgaatctgtagattgcttttggcagatagccatt
ttttcaatgttgatcctgcccattccatgagcatgggagatccttccatc
ttctgagatcttctttaattttttcttcagagacttgaagtttttatcat
acagatctttcacttccttagttagagtcacgtagatattttattttatt
tgtgattattgaggaggtgtgttccctatttctttcttagtctgtttatt
ctttggtaatgagaaggcatgactggttgaattattttaatccagctact
taccggagctgttatcaagttaagagatcctcg
gaattccattaaggtctctttattcaggctcaagcttgggctaccctgac
acagcaggaaggtggagcactgaatccagtgttaagcaaacatttataga
ggcaataagtcggtatctagccagatagacatctgactggggagccatta
gaacctttaacattattgtctggtgcttgaagccaaaccataagcttaac
ttctgcatttttttcttattggtggttatcaggaagtgaagtgctggggt
gggcttgtaacccgggggtgcagatttgttgttgttagcaacctcaagtt
caaccttagggtaggttctctaagatggagtctgacctcaaaagatttgg
tctctcagtgcatccctttttctacttctcatgggcatagtgcccatgag
gacacatggttttgactttctcagcatttgccaatatccatatgacacaa
atagcaaagtggcctttggatttaagatcttctcctgaaaagaaacaagt
ggagattaagcacgtgagagttatcaaatcaaatttcagccaagtagctg
ttcatagagtgtaagcccactccatactggcacacaaagcaaaattattt
ccaaaaaggtgatgtcgggggtgaggatattgcttactggtgaagaactt
agcatatactaggcccagtaatagataacagaagtacaagataaaaataa
caatcatgaattcctgaagcacagtacaaagcccaacaataataagatga
agagtgaaaatagagaagcctttgagtgaatgcatctttttgcatgaatt
atgtacagaaaatggtaatatttaccaaaaagcaaactacaaaaactata
tataatagtatcaactttagcatgattacatctaaagactgtctacacag
tggaacacagtgcccaaatcaattttctctggctccagaagctgacagga
atggataaatgaaggagtagcagttctagttatggctgtcagtcccattg
cattctgctcgttatcatctgtgggatggagtccttgtgaggggtcagac
ggactactgggtgtatctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_62445707_62446782
seq2: B6Ng01-023L03.g_70_1140

seq1  GAATTCCATTAAGGTCTCTTTATTCAGGCTCAAGCTTGGGCTACCCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTAAGGTCTCTTTATTCAGGCTCAAGCTTGGGCTACCCTGAC  50

seq1  ACAGCAGGAAGGTGGAGCACTGAATCCAGTGTTAAGCAAACATTTATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGGAAGGTGGAGCACTGAATCCAGTGTTAAGCAAACATTTATAGA  100

seq1  GGCAATAAGTCGGTATCTAGCCAGATAGACATCTGACTGGGGAGCCATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATAAGTCGGTATCTAGCCAGATAGACATCTGACTGGGGAGCCATTA  150

seq1  GAACCTTTAACATTATTGTCTGGTGCTTGAAGCCAAACCATAAGCTTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTTTAACATTATTGTCTGGTGCTTGAAGCCAAACCATAAGCTTAAC  200

seq1  TTCTGCATTTTTTTCTTATTGGTGGTTATCAGGAAGTGAAGTGCTGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCATTTTTTTCTTATTGGTGGTTATCAGGAAGTGAAGTGCTGGGGT  250

seq1  GGGCTTGTAACCCGGGGGTGCAGATTTGTTGTTGTTAGCAACCTCAAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGTAACCCGGGGGTGCAGATTTGTTGTTGTTAGCAACCTCAAGTT  300

seq1  CAACCTTAGGGTAGGTTCTCTAAGATGGAGTCTGACCTCAAAAGATTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTTAGGGTAGGTTCTCTAAGATGGAGTCTGACCTCAAAAGATTTGG  350

seq1  TCTCTCAGTGCATCCCTTTTTCTACTTCTCATGGGCATAGTGCCCATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAGTGCATCCCTTTTTCTACTTCTCATGGGCATAGTGCCCATGAG  400

seq1  GACACATGGTTTTGACTTTCTCAGCATTTGCCAATATCCATATGACACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATGGTTTTGACTTTCTCAGCATTTGCCAATATCCATATGACACAA  450

seq1  ATAGCAAAGTGGCCTTTGGATTTAAGATCTTCTCCTGAAAAGAAACAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAAGTGGCCTTTGGATTTAAGATCTTCTCCTGAAAAGAAACAAGT  500

seq1  GGAGATTAAGCACGTGAGAGTTATCAAATCAAATTTCAGCCAAGTAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTAAGCACGTGAGAGTTATCAAATCAAATTTCAGCCAAGTAGCTG  550

seq1  TTCATAGAGTGTAAGCCCACTCCATACTGGCACACAAAGCAAAATTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGAGTGTAAGCCCACTCCATACTGGCACACAAAGCAAAATTATTT  600

seq1  CCAAAAAGGTGATGTCGGGGGTGAGGATATTGCTTACTGGTGAAGAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAGGTGATGTCGGGGGTGAGGATATTGCTTACTGGTGAAGAACTT  650

seq1  AGCATATACTAGGCCCAGTAATAGATAACAGAAGTACAAGATAAAAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATACTAGGCCCAGTAATAGATAACAGAAGTACAAGATAAAAATAA  700

seq1  CAATCATGAATTCCTGAAGCACAGTACAAAGCCCAACAATAATAAGATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATGAATTCCTGAAGCACAGTACAAAGCCCAACAATAATAAGATGA  750

seq1  AGAGTGAAAATAGAGAAGCCTTTGAGTGAATGCATCTTTTTGCATGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAAAATAGAGAAGCCTTTGAGTGAATGCATCTTTTTGCATGAATT  800

seq1  ATGTACAGAAAATGGTAATATCTACCAAAAAGCAAACTACAAAAACTATA  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ATGTACAGAAAATGGTAATATTTACCAAAAAGCAAACTACAAAAACTATA  850

seq1  TAT-ATAGTATCAACTTTAGCATGATTACATCTAAAGACTGTCTACACAG  899
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATAGTATCAACTTTAGCATGATTACATCTAAAGACTGTCTACACAG  900

seq1  TGGAACACAGTGCCCAAATCAATTTCCTCTGGCTCCAGAAAGCTGACAAG  949
      ||||||||||||||||||||||||| |||||||||||| |||||||| ||
seq2  TGGAACACAGTGCCCAAATCAATTTTCTCTGGCTCCAG-AAGCTGAC-AG  948

seq1  GAATGGATAAATGAAGGAGTAGCAGGTTCCTAGTTATGGCTGTCAGCCCC  999
      |||||||||||||||||||||||||  | ||||||||||||||||| |||
seq2  GAATGGATAAATGAAGGAGTAGCAG--TTCTAGTTATGGCTGTCAGTCCC  996

seq1  ACTGCA-TCTGCACGTTATCCATCTGTGGGAATGGAGTCCCTGTGAGGGG  1048
      | |||| ||||| |||||| |||||||||| ||||||||| |||||||||
seq2  ATTGCATTCTGCTCGTTAT-CATCTGTGGG-ATGGAGTCCTTGTGAGGGG  1044

seq1  TCAGACGGCACACCTGGGTGTATCTCCC  1076
      |||||||| ||  |||||||||||||||
seq2  TCAGACGG-ACTACTGGGTGTATCTCCC  1071