BAC Information

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BAC

Clone NameB6Ng01-024I12
Chromosome16 (Build37)
Map Location 51,858,456 - 52,033,462
singlet/doubletdoublet
Overlap geneCblb
Upstream geneEG639820, LOC627543
Downstream geneAlcam, LOC100043430, LOC667895
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024I12.bB6Ng01-024I12.g
ACCDH856136DH856137
length8561,025
definitionDH856136|Mus musculus domesticus DNA, BAC clone: B6Ng01-024I12, 5' end.DH856137|Mus musculus domesticus DNA, BAC clone: B6Ng01-024I12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(52,032,607 - 52,033,462)(51,858,456 - 51,859,371)
sequence
gaattcaacttttgcaaacacagagttgaagaaaaatggcccaacctaaa
tacaaagctcatcaccataatagtgattattagccatacatataaataaa
acccgaagaaatcgcattcagggtgctgagggccgtgtacacacactgac
tgaactcaccactttgtccatgagtttccaagtcttctccacagtcctgc
ggtcagctgcagcttgctttgggggtccgactgcatcctgaatagcatca
ataatccccaaaatgcgacctttgcgggggtttcctcctcgaccaccagg
atttctgccattcatagaatttgccatctggaatcttagtcctttttgca
agatagaatttcaagagaggaaaagttagctggatatgaaagtatttccc
caacaggaacctgaactgaacaggctcacttgtacccattaatgatattc
tccgctgtctctgtgacaaagcccagggtcccagattcaactttttagta
accctgagtaagggcatcctccaagttaggagccatgacacaagatttgc
tcttacaatactaaaagttaaagatgcatcctctgcccgtgttctatgaa
gctacagctcaacatcatcaacaaaacaacttttaacaggtaagaacaca
atgtcgtccccccccccccttctgctgtaatccagattcgaaatactaga
gctgcaactcctaaaattcacgttgggagcctcacttcagtagcctcctt
cacgctgtttgatttcgccaagttattacataaatgcaaagtactccaca
cacgcaaaagggacacgtctcttgtcaacaaaggcggaggacttggatac
cccccc
gaattctctgtttaactttgtaccccatttttaaactgggttatttcgtt
tgttgatgtctaacttttgggatatacatatatatatatatatatatatg
agattaaccctttgttgaatgtagggttaatggagatctttttcccatca
ataggctgtcattttgtcctgatgatagtgtcctttgacaaaaagaagct
tttcattttcaggacttcgcatttattaattgttgtccttagtacctgag
ccactggtgttctgttaaagaatttgtttcctgtactggcaagctcaagg
ctatttcccactttctgctctattagatttagtgtatctggttttatgta
gaggtctatgatgcattgggtttgagttttttgcagagtaataagcatgt
acctatttatattcttctgcatgtagacatacagttagaccagcaccatt
tcttgaagatgctttgcattttccattgagtggttttggctactttgtca
aaaaaaaaatcaagtgtccctagatgtgtggatttatttttgggtcttag
gttcaattctagtgatcaacctgtctgtttctatatcaataccatgcagt
ttttattctcctaatttttaaaagaattaaagtttatatggtgtcctgca
agatctctggacccttatgtatactacacaagtagtagataactaaggcc
taggtctaagactgactaattctccagagagtggattaatcctttatttt
ttttctacgatacagaacactgtttttcttgaatattctattttagggtg
tttaagttttgaagcttttctcatccaagaaggccagtttcctcctgtga
ataaaatggaagaccacagataatgaatttgcataattgacactggagtc
cctctacatttgttaagggcctagagtataagcaattatgtgctcacttt
tatgcatcctttcatttaaatacttaactactcctcatagaaggggagag
tagttcctctctttaggtgatgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_52032607_52033462
seq2: B6Ng01-024I12.b_30_885 (reverse)

seq1  GGGGGGGTATCCAAGTCCTCCGCCTTTGTTGACAAGAGACGTGTCCCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGTATCCAAGTCCTCCGCCTTTGTTGACAAGAGACGTGTCCCTTT  50

seq1  TGCGTGTGTGGAGTACTTTGCATTTATGTAATAACTTGGCGAAATCAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGTGTGGAGTACTTTGCATTTATGTAATAACTTGGCGAAATCAAAC  100

seq1  AGCGTGAAGGAGGCTACTGAAGTGAGGCTCCCAACGTGAATTTTAGGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGAAGGAGGCTACTGAAGTGAGGCTCCCAACGTGAATTTTAGGAGT  150

seq1  TGCAGCTCTAGTATTTCGAATCTGGATTACAGCAGAAGGGGGGGGGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTCTAGTATTTCGAATCTGGATTACAGCAGAAGGGGGGGGGGGGA  200

seq1  CGACATTGTGTTCTTACCTGTTAAAAGTTGTTTTGTTGATGATGTTGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACATTGTGTTCTTACCTGTTAAAAGTTGTTTTGTTGATGATGTTGAGC  250

seq1  TGTAGCTTCATAGAACACGGGCAGAGGATGCATCTTTAACTTTTAGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTTCATAGAACACGGGCAGAGGATGCATCTTTAACTTTTAGTATT  300

seq1  GTAAGAGCAAATCTTGTGTCATGGCTCCTAACTTGGAGGATGCCCTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAGCAAATCTTGTGTCATGGCTCCTAACTTGGAGGATGCCCTTACT  350

seq1  CAGGGTTACTAAAAAGTTGAATCTGGGACCCTGGGCTTTGTCACAGAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTACTAAAAAGTTGAATCTGGGACCCTGGGCTTTGTCACAGAGAC  400

seq1  AGCGGAGAATATCATTAATGGGTACAAGTGAGCCTGTTCAGTTCAGGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGAGAATATCATTAATGGGTACAAGTGAGCCTGTTCAGTTCAGGTTC  450

seq1  CTGTTGGGGAAATACTTTCATATCCAGCTAACTTTTCCTCTCTTGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGGGGAAATACTTTCATATCCAGCTAACTTTTCCTCTCTTGAAATT  500

seq1  CTATCTTGCAAAAAGGACTAAGATTCCAGATGGCAAATTCTATGAATGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTGCAAAAAGGACTAAGATTCCAGATGGCAAATTCTATGAATGGC  550

seq1  AGAAATCCTGGTGGTCGAGGAGGAAACCCCCGCAAAGGTCGCATTTTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCCTGGTGGTCGAGGAGGAAACCCCCGCAAAGGTCGCATTTTGGG  600

seq1  GATTATTGATGCTATTCAGGATGCAGTCGGACCCCCAAAGCAAGCTGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTGATGCTATTCAGGATGCAGTCGGACCCCCAAAGCAAGCTGCAG  650

seq1  CTGACCGCAGGACTGTGGAGAAGACTTGGAAACTCATGGACAAAGTGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCGCAGGACTGTGGAGAAGACTTGGAAACTCATGGACAAAGTGGTG  700

seq1  AGTTCAGTCAGTGTGTGTACACGGCCCTCAGCACCCTGAATGCGATTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGTCAGTGTGTGTACACGGCCCTCAGCACCCTGAATGCGATTTCT  750

seq1  TCGGGTTTTATTTATATGTATGGCTAATAATCACTATTATGGTGATGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGTTTTATTTATATGTATGGCTAATAATCACTATTATGGTGATGAGC  800

seq1  TTTGTATTTAGGTTGGGCCATTTTTCTTCAACTCTGTGTTTGCAAAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATTTAGGTTGGGCCATTTTTCTTCAACTCTGTGTTTGCAAAAGTT  850

seq1  GAATTC  856
      ||||||
seq2  GAATTC  856

seq1: chr16_51858456_51859371
seq2: B6Ng01-024I12.g_175_1093

seq1  ACCCTTTGTTGAATGTAGGGTTAATGGAGATCTTTTTCCCATCAATAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTGTTGAATGTAGGGTTAATGGAGATCTTTTTCCCATCAATAGGC  50

seq1  TGTCATTTTGTCCTGATGATAGTGTCCTTTGACAAAAAGAAGCTTTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTGTCCTGATGATAGTGTCCTTTGACAAAAAGAAGCTTTTCAT  100

seq1  TTTCAGGACTTCGCATTTATTAATTGTTGTCCTTAGTACCTGAGCCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGACTTCGCATTTATTAATTGTTGTCCTTAGTACCTGAGCCACTG  150

seq1  GTGTTCTGTTAAAGAATTTGTTTCCTGTACTGGCAAGCTCAAGGCTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTGTTAAAGAATTTGTTTCCTGTACTGGCAAGCTCAAGGCTATTT  200

seq1  CCCACTTTCTGCTCTATTAGATTTAGTGTATCTGGTTTTATGTAGAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTCTGCTCTATTAGATTTAGTGTATCTGGTTTTATGTAGAGGTC  250

seq1  TATGATGCATTGGGTTTGAGTTTTTTGCAGAGTAATAAGCATGTACCTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGCATTGGGTTTGAGTTTTTTGCAGAGTAATAAGCATGTACCTAT  300

seq1  TTATATTCTTCTGCATGTAGACATACAGTTAGACCAGCACCATTTCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTCTTCTGCATGTAGACATACAGTTAGACCAGCACCATTTCTTGA  350

seq1  AGATGCTTTGCATTTTCCATTGAGTGGTTTTGGCTACTTTGTCAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTTTGCATTTTCCATTGAGTGGTTTTGGCTACTTTGTCAAAAAAA  400

seq1  AAATCAAGTGTCCCTAGATGTGTGGATTTATTTTTGGGTCTTAGGTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAGTGTCCCTAGATGTGTGGATTTATTTTTGGGTCTTAGGTTCAA  450

seq1  TTCTAGTGATCAACCTGTCTGTTTCTATATCAATACCATGCAGTTTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTGATCAACCTGTCTGTTTCTATATCAATACCATGCAGTTTTTAT  500

seq1  TCTCCTAATTTTTAAAAGAATTAAAGTTTATATGGTGTCCTGCAAGATCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTAATTTTTAAAAGAATTAAAGTTTATATGGTGTCCTGCAAGATCT  550

seq1  CTGGACCCTTATGTATACTACACAAGTAGTAGATAACTAAGGCCTAGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACCCTTATGTATACTACACAAGTAGTAGATAACTAAGGCCTAGGTC  600

seq1  TAAGACTGACTAATTCTCCAGAGAGTGGATTAATCCTTTATTTTTTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTGACTAATTCTCCAGAGAGTGGATTAATCCTTTATTTTTTTTCT  650

seq1  ACGATACAGAACACTG-TTTTCTTGAATACTCTATTTTAGGGTGTTTAAG  699
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACGATACAGAACACTGTTTTTCTTGAATATTCTATTTTAGGGTGTTTAAG  700

seq1  TTTTGAAGCTTTTCTCATCCAAG-AGGCCAGTTTCCTCCTGTGAATAAAA  748
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTTGAAGCTTTTCTCATCCAAGAAGGCCAGTTTCCTCCTGTGAATAAAA  750

seq1  T-GAAGACCACAGATAATGAATTTGCATAATTGACACTGAAGTCACTCTA  797
      | ||||||||||||||||||||||||||||||||||||| |||| |||| 
seq2  TGGAAGACCACAGATAATGAATTTGCATAATTGACACTGGAGTCCCTCT-  799

seq1  ACATTTGTTAAGTGTCTAGAGTATAAAGCAATAATGTGCTCACTTTTATG  847
      |||||||||||| | ||||||||| ||||||| |||||||||||||||||
seq2  ACATTTGTTAAGGGCCTAGAGTAT-AAGCAATTATGTGCTCACTTTTATG  848

seq1  CATCCTTTCATTTAAATACTTAACTACTCCTCATAGAAGGGGAGAGTAGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTCATTTAAATACTTAACTACTCCTCATAGAAGGGGAGAGTAGT  898

seq1  T-CTCTCTTTA-GTGATGTGT  916
      | ||||||||| |||||||||
seq2  TCCTCTCTTTAGGTGATGTGT  919