BAC Information

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BAC

Clone NameB6Ng01-024O21
Chromosome16 (Build37)
Map Location 65,627,028 - 65,628,155
singlet/doubletsinglet
Overlap genenone
Upstream gene4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931, Pou1f1, Chmp2b
Downstream geneEG383186, Vgll3, LOC664846, LOC100039035
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024O21.bB6Ng01-024O21.g
ACCDH856420DH856421
length1,1161,180
definitionDH856420|Mus musculus domesticus DNA, BAC clone: B6Ng01-024O21, 5' end.DH856421|Mus musculus domesticus DNA, BAC clone: B6Ng01-024O21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattccacccaggacttagtcatgctttcaaaccaattaagatga
tggactgtatgtttaataaattttccaattgtaaaagaaaatatgtatta
taaaacaacaaatctctatggcatatttttttattatctcataaaaagcc
tttaaagcatttgatgccaataagatacttgttttgtcataattcttttc
aaattgtgtttattgaactctcagttggagccctgaagtatttgtttcaa
gtcttctcaatgtgttggcaatttatcagcaggggaggctcatgtaacag
tgaatgtaaactttctggcattatattattagcactgttattagtaatat
ttatgtagtgcaatatatatgcttattcctaaactggtatgaacaaagag
agtccctgctcagaggatatagctataggatactattatttattaaaacc
caattggtgcatggtttgagcaaagtcctgtgaatatttcctaatgactg
ttcctgatttaagtgttcagtgttttgtgagcgaactgaggctcacccaa
ggaagctgagtgggacgcacgatgtgtgaatcatcccaattcggtaagca
ttgctggtaaatgaccagtcagtacgtcctatgacatctgaccctgcctt
ttactatccaaagcctgggtaattcaaagactacaaggcagcctcagagt
tatcaatgaaagagaaccataaagcagactgcctcaggctaaccagacag
ttttgtgttcacctgtctatgtgtgagacatcctcatctccttaccagat
gatatgaactctaattccggacttttagctctaccgactttagtcgatat
acaaggtcaaaagtctcatgttctttaatggacccttcattcatctttaa
aataggtgtaacaatatggttattggtatatgtacagggctcatcacagt
acttgggaataataagaaccagttgattgacagccattgtttgttataca
actgcttgggtatcttccatgaagtactgttctctttgtgcatccaatta
ttagtgaaaccccacggcatgtgccgaaggtgaagtccaaacttgtttgt
attactagagaacatt
gaattctcctctgaggaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattc
ccagagaggaacaaaggaaaatacaacaggcatttccggtctttgaagga
gccgagggtgggcgtgtccacgctccggtagaatacttacaaattaaaga
aattgccgagtcggtccgtaaatacggaaccaatgctaattttaccttgg
tgcagttagacaggcttgccggcatggcactaactcctgccgactggcaa
acggttgtaaaagccgctctccctagtatgggcaaatatatggaatggag
agcgctttggcacgaagctgcacaagcgcaggcccgagcaaacgcagctg
ctttgactccagagcagagagattggacttttgacttgttaacgggtcag
ggagcttattctgctgatcagacaaactaccattggggagcttatgccca
gatttcttccacggctattagggcctggaatgcgctctctcgagcaggtg
aaaccactgggcagttaacaaagataatccagggacctcaggaatccttc
tcagattttgtggccagaatgacagaggcagcagagcgtatttttggaga
gtcagagcaagctgcgcctctgatagaacagctaatctatgagcaagcca
caaagtattgccgagcggccatagccccaagaaagaacaaaggcttacaa
gactggctcaggttctgtcgagagcttgggggacctctcaccatggcagg
cttagcggccgcattcctccaatccctagaaccgcttcatggagcagaaa
ttgatcagaggaacatggtttaattggcggaaagcctggggcatttagaa
aaggatgccagactcccagaataactgggaggacctcacctctttgctct
aaaggagggcaagggtatcacgagcgacaccatggcgcctctgtggaggg
tgtataatggagcatgaattcttgccaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_65627028_65628155
seq2: B6Ng01-024O21.b_46_1161

seq1  GAATTCATTCCACCCAGGACTTAGTCATGCTTTCAAACCAATTAAGATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCCACCCAGGACTTAGTCATGCTTTCAAACCAATTAAGATGA  50

seq1  TGGACTGTATGTTTAATAAATTTTCCAATTGTAAAAGAAAATATGTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGTATGTTTAATAAATTTTCCAATTGTAAAAGAAAATATGTATTA  100

seq1  TAAAACAACAAATCTCTATGGCATATTTTTTTATTATCTCATAAAAAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAACAAATCTCTATGGCATATTTTTTTATTATCTCATAAAAAGCC  150

seq1  TTTAAAGCATTTGATGCCAATAAGATACTTGTTTTGTCATAATTCTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGCATTTGATGCCAATAAGATACTTGTTTTGTCATAATTCTTTTC  200

seq1  AAATTGTGTTTATTGAACTCTCAGTTGGAGCCCTGAAGTATTTGTTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTGTTTATTGAACTCTCAGTTGGAGCCCTGAAGTATTTGTTTCAA  250

seq1  GTCTTCTCAATGTGTTGGCAATTTATCAGCAGGGGAGGCTCATGTAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTCAATGTGTTGGCAATTTATCAGCAGGGGAGGCTCATGTAACAG  300

seq1  TGAATGTAAACTTTCTGGCATTATATTATTAGCACTGTTATTAGTAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTAAACTTTCTGGCATTATATTATTAGCACTGTTATTAGTAATAT  350

seq1  TTATGTAGTGCAATATATATGCTTATTCCTAAACTGGTATGAACAAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTAGTGCAATATATATGCTTATTCCTAAACTGGTATGAACAAAGAG  400

seq1  AGTCCCTGCTCAGAGGATATAGCTATAGGATACTATTATTTATTAAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTGCTCAGAGGATATAGCTATAGGATACTATTATTTATTAAAACC  450

seq1  CAATTGGTGCATGGTTTGAGCAAAGTCCTGTGAATATTTCCTAATGACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGTGCATGGTTTGAGCAAAGTCCTGTGAATATTTCCTAATGACTG  500

seq1  TTCCTGATTTAAGTGTTCAGTGTTTTGTGAGCGAACTGAGGCTCACCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGATTTAAGTGTTCAGTGTTTTGTGAGCGAACTGAGGCTCACCCAA  550

seq1  GGAAGCTGAGTGGGACGCACGATGTGTGAATCATCCCAATTCGGTAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTGAGTGGGACGCACGATGTGTGAATCATCCCAATTCGGTAAGCA  600

seq1  TTGCTGGTAAATGACCAGTCAGTACGTCCTATGACATCTGACCCTGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGTAAATGACCAGTCAGTACGTCCTATGACATCTGACCCTGCCTT  650

seq1  TTACTATCCAAAGCCTGGGTAATTCAAAGACTACAAGGCAGCCTCAGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATCCAAAGCCTGGGTAATTCAAAGACTACAAGGCAGCCTCAGAGT  700

seq1  TATCAATGAAAGAGAACCATAAAGCAGACTGCCTCAGGCTAACCAGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATGAAAGAGAACCATAAAGCAGACTGCCTCAGGCTAACCAGACAG  750

seq1  TTTTGTGTTCACCTGTCTATGTGTGAGACATCCTCATCTCCTTACCAGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGTTCACCTGTCTATGTGTGAGACATCCTCATCTCCTTACCAGAT  800

seq1  GATATGAACTCTAATTCCGGACTTTTAGCTCTACCGACTTTAGTCGATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGAACTCTAATTCCGGACTTTTAGCTCTACCGACTTTAGTCGATAT  850

seq1  ACAAGGTCAAAAGTCTCATGTTCTTTAATGGACCCCTTCATTCATCTTTA  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACAAGGTCAAAAGTCTCATGTTCTTTAATGGA-CCCTTCATTCATCTTTA  899

seq1  AAATAGGTGTAACAATATGGTTATTGTTATATGTACAGGGCTCATCACAG  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAATAGGTGTAACAATATGGTTATTGGTATATGTACAGGGCTCATCACAG  949

seq1  TACCTGGGAAATAATAAGAACCAAGTTGA-TGACAGCCATTG-TTGTTAT  998
      ||| |||| ||||||||||||| |||||| |||||||||||| |||||||
seq2  TACTTGGG-AATAATAAGAACC-AGTTGATTGACAGCCATTGTTTGTTAT  997

seq1  CACAGCTGCCTTGGGTATCTCCCACTGAAGTTACTGGTTCTCTTTGTGCA  1048
       ||| ||| ||||||||||| ||| ||||| |||| ||||||||||||||
seq2  -ACAACTG-CTTGGGTATCTTCCA-TGAAG-TACT-GTTCTCTTTGTGCA  1042

seq1  TCTCAGTTTAGTAGTAGAAACCCACAGCACTGGCCGAAAGGTGGAAGCCC  1098
      ||  |  ||| ||||  || ||||| |||   |||| ||||| |||| ||
seq2  TCCAA--TTATTAGTGAAACCCCACGGCATGTGCCG-AAGGT-GAAGTCC  1088

seq1  AAACCTTGTTTGTATTACTTAGAGAACATT  1128
      ||| |||||||||||||| |||||||||||
seq2  AAA-CTTGTTTGTATTAC-TAGAGAACATT  1116